• Summary page

Sequences

• sequence, whole genome shotgun sequence
• sequence, whole genome shotgun sequence
• sequence, whole genome shotgun sequence
• sequence, whole genome shotgun sequence
• sequence, whole genome shotgun sequence
• sequence, whole genome shotgun sequence
• sequence, whole genome shotgun sequence
• sequence, whole genome shotgun sequence
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Taxonomy

cellular organisms
» Bacteria
» Firmicutes
» Bacilli
» Lactobacillales
» Lactobacillaceae
» Lactobacillus
» Lactobacillus brevis
» Lactobacillus brevis subsp. gravesensis

Lactobacillus brevis subsp. gravesensis ATCC 27305

HMPREF0496_1720 - ABC superfamily ATP binding cassette transporter, ABC protein

Analysis Tools

View alignment of region with nucmer

Design primers within region using Primer3Plus

View region in Artemis

Retrieve HMPREF0496_1720 nucleotide sequence in FASTA format

Retrieve HMPREF0496_1720 protein sequence in FASTA format

Retrieve HMPREF0496_1720 nucleotide sequence with 10 50 100 200 400 600 800 1000 2000 bp. flanking sequence
Include translation of coding sequence
Include complementary strand.

Run NCBI BLASTP PSI-BLAST against the Non-redundant protein sequences (nr) SwissProt Protein Data Bank (PDB) database using HMPREF0496_1720 protein sequence
(optional - restrict search to taxonomic group: root cellular organisms Bacteria Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Lactobacillus brevis Lactobacillus brevis subsp. gravesensis )

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Annotation

Product:

ABC superfamily ATP binding cassette transporter, ABC protein

GenBank ID: ZP_03939606.1

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