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Lactobacillus crispatus ST1 complete genome, strain ST1. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS dnaA CBL49448.1 LCRIS_00001 Chromosomal replication initiator protein dnaA 1 1368 1
CDS dnaN CBL49449.1 LCRIS_00002 DNA polymerase III, beta subunit 1543 2673 1
CDS - CBL49450.1 LCRIS_00003 RNA-binding S4 domain protein 2890 3111 1
CDS recF CBL49451.1 LCRIS_00004 DNA replication and repair protein recF 3120 4247 1
CDS gyrB CBL49452.1 LCRIS_00005 DNA gyrase, B subunit 4248 6212 1
CDS gyrA CBL49453.1 LCRIS_00006 DNA gyrase, A subunit 6222 8702 1
CDS rpsF CBL49454.1 LCRIS_00007 30S ribosomal protein S6 8920 9216 1
CDS ssb CBL49455.1 LCRIS_00008 Single-stranded DNA-binding protein 9266 9784 1
CDS rpsR CBL49456.1 LCRIS_00009 30S ribosomal protein S18 9812 10048 1
CDS - CBL49457.1 LCRIS_00010 Prophage repressor 10107 10577 -1
CDS - CBL49458.1 LCRIS_00011 Bacteriocin helveticin-J 10682 11560 1
CDS - CBL49459.1 LCRIS_00012 S-layer protein 11701 12807 1
CDS - CBL49460.1 LCRIS_00013 Phosphoesterase, DHH family protein 13028 15049 1
CDS rplI CBL49461.1 LCRIS_00014 50S ribosomal protein L9 15061 15516 1
CDS dnaB1 CBL49462.1 LCRIS_00015 Replicative DNA helicase 15536 16927 1
CDS phnD1 CBL49463.1 LCRIS_00016 Phosphonate ABC transporter, phosphonate-binding protein 17095 18030 1
CDS degV1 CBL49464.1 LCRIS_00017 DegV family protein 18140 19069 1
CDS scrK CBL49465.1 LCRIS_00018 Fructokinase 19185 20063 1
CDS - CBL49466.1 LCRIS_00019 putative protein without homology 20211 20402 1
CDS - CBL49467.1 LCRIS_00020 Integral membrane protein 20453 20710 1
CDS - CBL49468.1 LCRIS_00021 conserved protein 20762 21991 -1
CDS mgtC CBL49469.1 LCRIS_00022 Mg2 transporter-C (MgtC) family protein 22089 22790 -1
tRNA tRNA-Thr - LCRIS_02037 tRNA-Thr 22965 23037 1
CDS - CBL49470.1 LCRIS_00023 putative protein without homology 23214 23435 1
CDS - CBL49471.1 LCRIS_00024 putative protein without homology, LPXTG-motif cell wall anchor 23595 24662 1
CDS - CBL49472.1 LCRIS_00025 Membrane protein 24761 25534 1
CDS - CBL49473.1 LCRIS_00027 Adenosylcobalamin biosynthesis protein 25602 25766 -1
CDS - CBL49474.1 LCRIS_00026 putative protein without homology, LPXTG-motif cell wall anchor 25759 26073 1
CDS - CBL49475.1 LCRIS_00028 putative protein without homology 26168 26428 1
CDS - CBL49476.1 LCRIS_00029 Mucus-binding protein 26758 30456 1
CDS - CBL49477.1 LCRIS_00030 putative protein without homology 30609 30776 -1
CDS - CBL49478.1 LCRIS_00031 Transposase 30842 31225 -1
CDS - CBL49479.1 LCRIS_00032 putative protein without homology 31185 31433 -1
CDS oppA1 CBL49480.1 LCRIS_00033 Oligopeptide ABC transporter, oligopeptide-binding protein 31856 33616 -1
CDS - CBL49481.1 LCRIS_00034 Permease 33813 34847 1
CDS - CBL49482.1 LCRIS_00035 Esterase 34847 35419 1
CDS - CBL49483.1 LCRIS_00036 putative protein without homology 35453 35635 -1
CDS - CBL49484.1 LCRIS_00037 Sugar transporter 35819 37153 1
CDS - CBL49485.1 LCRIS_00038 ABC transporter, ATP-binding protein 37561 38322 -1
CDS - CBL49486.1 LCRIS_00039 ABC transporter, permease protein 38319 39215 -1
CDS - CBL49487.1 LCRIS_00040 ABC transporter, substrate-binding protein 39212 40204 -1
CDS - CBL49488.1 LCRIS_00041 ABC transporter, ATPase and permease components 40487 42094 -1
CDS - CBL49489.1 LCRIS_00042 Transcriptional regulator, XRE family 42184 42996 -1
CDS - CBL49490.1 LCRIS_00043 HAD superfamily hydrolase 43109 43816 1
CDS - CBL49491.1 LCRIS_00044 Mg2 and Co2 transporter 43813 44682 -1
CDS - CBL49492.1 LCRIS_00045 Oxidoreductase, aldo/keto reductase family 44798 45655 1
CDS - CBL49493.1 LCRIS_00046 conserved hypothetical protein 45722 46426 -1
CDS - CBL49494.1 LCRIS_00047 Transcriptional regulator 46846 47664 -1
CDS - CBL49495.1 LCRIS_00048 putative protein without homology 47721 47891 -1
CDS - CBL49496.1 LCRIS_00049 Translation elongation factor, homologous to tetracycline resistance protein 48029 49954 1
CDS - CBL49497.1 LCRIS_00050 HAD superfamily hydrolase 50123 50941 1
CDS ldhA CBL49498.1 LCRIS_00051 D-lactate dehydrogenase 51010 52023 -1
CDS - CBL49499.1 LCRIS_00052 putative protein without homology 52381 52632 1
CDS - CBL49500.1 LCRIS_00053 putative protein without homology, LPXTG-motif cell wall anchor 52592 53131 1
CDS xthA CBL49501.1 LCRIS_00054 Exodeoxyribonuclease III 53686 54513 1
CDS - CBL49502.1 LCRIS_00055 Glutamate/gamma-aminobutyrate antiporter 54587 56029 1
CDS - CBL49503.1 LCRIS_00056 DNA/RNA helicase, DEAD/DEAH box family 56095 58923 1
CDS - CBL49504.1 LCRIS_00057 Penicillin-binding protein 58958 60010 -1
CDS - CBL49505.1 LCRIS_00058 conserved hypothetical protein 60241 61431 -1
CDS def1 CBL49506.1 LCRIS_00059 Peptide deformylase 61493 61906 1
CDS - CBL49507.1 LCRIS_00060 putative protein without homology 62484 62576 -1
rRNA 16s rRNA - LCRIS_02033 16S ribosomal RNA 62524 64075 1
CDS - CBL49508.1 LCRIS_00061 PG1 protein, homology to Homo sapiens 62786 63220 -1
CDS - CBL49509.1 LCRIS_00062 conserved hypothetical protein 63654 64007 1
tRNA tRNA-Ile - LCRIS_02038 tRNA-Ile 64212 64286 1
tRNA tRNA-Ala - LCRIS_02039 tRNA-Ala 64343 64415 1
rRNA 23s rRNA - LCRIS_02029 23S ribosomal RNA 64538 67443 1
CDS - CBL49510.1 LCRIS_00063 conserved protein 65092 65562 -1
CDS - CBL49511.1 LCRIS_00064 Cell wall-associated hydrolase 66983 67300 -1
rRNA 5s rRNA - LCRIS_02025 5S ribosomal RNA 67516 67631 1
tRNA tRNA-Asn - LCRIS_02040 tRNA-Asn 67644 67719 1
CDS - CBL49512.1 LCRIS_00065 Acetyltransferase 68238 68672 1
CDS - CBL49513.1 LCRIS_00066 Steroid binding protein 68891 69112 -1
CDS arbZ CBL49514.1 LCRIS_00067 Phospho-beta-glycosidase 69205 70074 -1
CDS arbY CBL49515.1 LCRIS_00068 Lipopolysaccharide biosynthesis glycosyltransferase 70071 71018 -1
CDS - CBL49516.1 LCRIS_00069 Lipopolysaccharide biosynthesis glycosyltransferase 71032 71985 -1
CDS arbx CBL49517.1 LCRIS_00070 Lipopolysaccharide biosynthesis glycosyltransferase 72003 72839 -1
CDS arbV CBL49518.1 LCRIS_00071 1-acyl-sn-glycerol-3-phosphate acyltransferase 72856 73617 -1
tRNA tRNA-Lys - LCRIS_02100 tRNA-Lys 73797 73869 -1
CDS - CBL49519.1 LCRIS_00072 Conserved hypothetical protein 74002 74223 -1
tRNA tRNA-Lys - LCRIS_02099 tRNA-Lys 74342 74414 -1
CDS vicR CBL49520.1 LCRIS_00073 Response regulator 74551 75267 1
CDS vicK CBL49521.1 LCRIS_00074 Sensor protein 75338 77191 1
CDS - CBL49522.1 LCRIS_00075 conserved hypothetical protein 77172 78533 1
CDS - CBL49523.1 LCRIS_00076 conserved hypothetical protein 78536 79360 1
CDS - CBL49524.1 LCRIS_00077 Metallo-beta-lactamase family protein 79373 80170 1
CDS htrA CBL49525.1 LCRIS_00078 Serine protease 80232 81512 1
CDS ybeA CBL49526.1 LCRIS_00079 Alpha/beta knot family protein 82030 82509 1
CDS - CBL49527.1 LCRIS_00080 Peptidase 83009 83554 1
CDS pepI CBL49528.1 LCRIS_00081 Proline iminopeptidase 83578 84459 -1
CDS cbiQ1 CBL49529.1 LCRIS_00082 ABC transporter, permease protein 84468 85121 -1
CDS cbiO1 CBL49530.1 LCRIS_00083 ABC transporter, ATP-binding protein 85126 86478 -1
CDS - CBL49531.1 LCRIS_00084 Regulatory protein 86635 87576 1
CDS htpX CBL49532.1 LCRIS_00085 Probable protease htpX homolog 87612 88508 -1
CDS lemA CBL49533.1 LCRIS_00086 LemA family protein 88527 89087 -1
CDS - CBL49534.1 LCRIS_00087 Cation transporter 89184 90290 -1
CDS - CBL49535.1 LCRIS_00088 conserved protein 90490 90894 1
CDS glpQ1 CBL49536.1 LCRIS_00089 Glycerophosphodiester phosphodiesterase 90988 92766 1
CDS - CBL49537.1 LCRIS_00090 conserved protein 93133 93999 1
CDS - CBL49538.1 LCRIS_00091 conserved protein 93983 94138 1