• Summary page

Sequences

• contig00235, whole genome shotgun sequence
• contig00043, whole genome shotgun sequence
• contig00131, whole genome shotgun sequence
• contig00207, whole genome shotgun sequence
• contig00106, whole genome shotgun sequence
• contig00160, whole genome shotgun sequence
• contig00021, whole genome shotgun sequence
• contig00229, whole genome shotgun sequence
• contig00019, whole genome shotgun sequence
• contig00057, whole genome shotgun sequence
• contig00080, whole genome shotgun sequence
• contig00122, whole genome shotgun sequence
• contig00034, whole genome shotgun sequence
• contig00143, whole genome shotgun sequence
• contig00083, whole genome shotgun sequence
• contig00023, whole genome shotgun sequence
• contig00169, whole genome shotgun sequence
• contig00129, whole genome shotgun sequence
• contig00042, whole genome shotgun sequence
• contig00046, whole genome shotgun sequence
• contig00013, whole genome shotgun sequence
• contig00115, whole genome shotgun sequence
• contig00134, whole genome shotgun sequence
• contig00165, whole genome shotgun sequence
• contig00095, whole genome shotgun sequence
• contig00039, whole genome shotgun sequence
• contig00260, whole genome shotgun sequence
• contig00181, whole genome shotgun sequence
• contig00085, whole genome shotgun sequence
• contig00018, whole genome shotgun sequence
• contig00258, whole genome shotgun sequence
• contig00119, whole genome shotgun sequence
• contig00088, whole genome shotgun sequence
• contig00159, whole genome shotgun sequence
• contig00109, whole genome shotgun sequence
• contig00126, whole genome shotgun sequence
• contig00113, whole genome shotgun sequence
• contig00092, whole genome shotgun sequence
• contig00099, whole genome shotgun sequence
• contig00268, whole genome shotgun sequence
• contig00238, whole genome shotgun sequence
• contig00003, whole genome shotgun sequence
• contig00020, whole genome shotgun sequence
• contig00171, whole genome shotgun sequence
• contig00120, whole genome shotgun sequence
• contig00254, whole genome shotgun sequence
• contig00017, whole genome shotgun sequence
• contig00176, whole genome shotgun sequence
• contig00103, whole genome shotgun sequence
• contig00064, whole genome shotgun sequence
• contig00027, whole genome shotgun sequence
• contig00274, whole genome shotgun sequence
• contig00228, whole genome shotgun sequence
• contig00163, whole genome shotgun sequence
• contig00248, whole genome shotgun sequence
• contig00219, whole genome shotgun sequence
• contig00116, whole genome shotgun sequence
• contig00026, whole genome shotgun sequence
• contig00146, whole genome shotgun sequence
• contig00230, whole genome shotgun sequence
• contig00060, whole genome shotgun sequence
• contig00010, whole genome shotgun sequence
• contig00155, whole genome shotgun sequence
• contig00048, whole genome shotgun sequence
• contig00198, whole genome shotgun sequence
• contig00055, whole genome shotgun sequence
• contig00007, whole genome shotgun sequence
• contig00044, whole genome shotgun sequence
• contig00024, whole genome shotgun sequence
• contig00093, whole genome shotgun sequence
• contig00009, whole genome shotgun sequence
• contig00030, whole genome shotgun sequence
• contig00117, whole genome shotgun sequence
• contig00211, whole genome shotgun sequence
• contig00156, whole genome shotgun sequence
• contig00107, whole genome shotgun sequence
• contig00110, whole genome shotgun sequence
• contig00089, whole genome shotgun sequence
• contig00168, whole genome shotgun sequence
• contig00182, whole genome shotgun sequence
• contig00133, whole genome shotgun sequence
• contig00162, whole genome shotgun sequence
• contig00012, whole genome shotgun sequence
• contig00178, whole genome shotgun sequence
• contig00132, whole genome shotgun sequence
• contig00061, whole genome shotgun sequence
• contig00167, whole genome shotgun sequence
• contig00127, whole genome shotgun sequence
• contig00114, whole genome shotgun sequence
• contig00252, whole genome shotgun sequence
• contig00226, whole genome shotgun sequence
• contig00072, whole genome shotgun sequence
• contig00050, whole genome shotgun sequence
• contig00094, whole genome shotgun sequence
• contig00149, whole genome shotgun sequence
• contig00015, whole genome shotgun sequence
• contig00053, whole genome shotgun sequence
• contig00075, whole genome shotgun sequence
• contig00081, whole genome shotgun sequence
• contig00058, whole genome shotgun sequence
• contig00098, whole genome shotgun sequence
• contig00022, whole genome shotgun sequence
• contig00078, whole genome shotgun sequence
• contig00105, whole genome shotgun sequence
• contig00100, whole genome shotgun sequence
• contig00001, whole genome shotgun sequence
• contig00255, whole genome shotgun sequence
• contig00128, whole genome shotgun sequence
• contig00196, whole genome shotgun sequence
• contig00041, whole genome shotgun sequence
• contig00157, whole genome shotgun sequence
• contig00028, whole genome shotgun sequence
• contig00236, whole genome shotgun sequence
• contig00035, whole genome shotgun sequence
• contig00217, whole genome shotgun sequence
• contig00253, whole genome shotgun sequence
• contig00051, whole genome shotgun sequence
• contig00111, whole genome shotgun sequence
• contig00121, whole genome shotgun sequence
• contig00086, whole genome shotgun sequence
• contig00244, whole genome shotgun sequence
• contig00077, whole genome shotgun sequence
• contig00222, whole genome shotgun sequence
• contig00054, whole genome shotgun sequence
• contig00025, whole genome shotgun sequence
• contig00059, whole genome shotgun sequence
• contig00016, whole genome shotgun sequence
• contig00164, whole genome shotgun sequence
• contig00008, whole genome shotgun sequence
• contig00125, whole genome shotgun sequence
• contig00047, whole genome shotgun sequence
• contig00004, whole genome shotgun sequence
• contig00138, whole genome shotgun sequence
• contig00074, whole genome shotgun sequence
• contig00011, whole genome shotgun sequence
• contig00173, whole genome shotgun sequence
• contig00049, whole genome shotgun sequence
• contig00006, whole genome shotgun sequence
• contig00045, whole genome shotgun sequence
• contig00249, whole genome shotgun sequence

Taxonomy

cellular organisms
» Bacteria
» Firmicutes
» Bacilli
» Lactobacillales
» Lactobacillaceae
» Lactobacillus
» Lactobacillus delbrueckii
» Lactobacillus delbrueckii subsp. bulgaricus

Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4

HMPREF9264_1238 - MATE efflux family protein

Analysis Tools

View alignment of region with nucmer

Design primers within region using Primer3Plus

View region in Artemis

Retrieve HMPREF9264_1238 nucleotide sequence in FASTA format

Retrieve HMPREF9264_1238 protein sequence in FASTA format

Retrieve HMPREF9264_1238 nucleotide sequence with 10 50 100 200 400 600 800 1000 2000 bp. flanking sequence
Include translation of coding sequence
Include complementary strand.

Run NCBI BLASTP PSI-BLAST against the Non-redundant protein sequences (nr) SwissProt Protein Data Bank (PDB) database using HMPREF9264_1238 protein sequence
(optional - restrict search to taxonomic group: root cellular organisms Bacteria Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Lactobacillus delbrueckii Lactobacillus delbrueckii subsp. bulgaricus )

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Annotation

Product:

MATE efflux family protein

GenBank ID: ZP_07093243.1

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