• Summary page

Sequences

• contig00235, whole genome shotgun sequence
• contig00043, whole genome shotgun sequence
• contig00131, whole genome shotgun sequence
• contig00207, whole genome shotgun sequence
• contig00106, whole genome shotgun sequence
• contig00160, whole genome shotgun sequence
• contig00021, whole genome shotgun sequence
• contig00229, whole genome shotgun sequence
• contig00019, whole genome shotgun sequence
• contig00057, whole genome shotgun sequence
• contig00080, whole genome shotgun sequence
• contig00122, whole genome shotgun sequence
• contig00034, whole genome shotgun sequence
• contig00143, whole genome shotgun sequence
• contig00083, whole genome shotgun sequence
• contig00023, whole genome shotgun sequence
• contig00169, whole genome shotgun sequence
• contig00129, whole genome shotgun sequence
• contig00042, whole genome shotgun sequence
• contig00046, whole genome shotgun sequence
• contig00013, whole genome shotgun sequence
• contig00115, whole genome shotgun sequence
• contig00134, whole genome shotgun sequence
• contig00165, whole genome shotgun sequence
• contig00095, whole genome shotgun sequence
• contig00039, whole genome shotgun sequence
• contig00260, whole genome shotgun sequence
• contig00181, whole genome shotgun sequence
• contig00085, whole genome shotgun sequence
• contig00018, whole genome shotgun sequence
• contig00258, whole genome shotgun sequence
• contig00119, whole genome shotgun sequence
• contig00088, whole genome shotgun sequence
• contig00159, whole genome shotgun sequence
• contig00109, whole genome shotgun sequence
• contig00126, whole genome shotgun sequence
• contig00113, whole genome shotgun sequence
• contig00092, whole genome shotgun sequence
• contig00099, whole genome shotgun sequence
• contig00268, whole genome shotgun sequence
• contig00238, whole genome shotgun sequence
• contig00003, whole genome shotgun sequence
• contig00020, whole genome shotgun sequence
• contig00171, whole genome shotgun sequence
• contig00120, whole genome shotgun sequence
• contig00254, whole genome shotgun sequence
• contig00017, whole genome shotgun sequence
• contig00176, whole genome shotgun sequence
• contig00103, whole genome shotgun sequence
• contig00064, whole genome shotgun sequence
• contig00027, whole genome shotgun sequence
• contig00274, whole genome shotgun sequence
• contig00228, whole genome shotgun sequence
• contig00163, whole genome shotgun sequence
• contig00248, whole genome shotgun sequence
• contig00219, whole genome shotgun sequence
• contig00116, whole genome shotgun sequence
• contig00026, whole genome shotgun sequence
• contig00146, whole genome shotgun sequence
• contig00230, whole genome shotgun sequence
• contig00060, whole genome shotgun sequence
• contig00010, whole genome shotgun sequence
• contig00155, whole genome shotgun sequence
• contig00048, whole genome shotgun sequence
• contig00198, whole genome shotgun sequence
• contig00055, whole genome shotgun sequence
• contig00007, whole genome shotgun sequence
• contig00044, whole genome shotgun sequence
• contig00024, whole genome shotgun sequence
• contig00093, whole genome shotgun sequence
• contig00009, whole genome shotgun sequence
• contig00030, whole genome shotgun sequence
• contig00117, whole genome shotgun sequence
• contig00211, whole genome shotgun sequence
• contig00156, whole genome shotgun sequence
• contig00107, whole genome shotgun sequence
• contig00110, whole genome shotgun sequence
• contig00089, whole genome shotgun sequence
• contig00168, whole genome shotgun sequence
• contig00182, whole genome shotgun sequence
• contig00133, whole genome shotgun sequence
• contig00162, whole genome shotgun sequence
• contig00012, whole genome shotgun sequence
• contig00178, whole genome shotgun sequence
• contig00132, whole genome shotgun sequence
• contig00061, whole genome shotgun sequence
• contig00167, whole genome shotgun sequence
• contig00127, whole genome shotgun sequence
• contig00114, whole genome shotgun sequence
• contig00252, whole genome shotgun sequence
• contig00226, whole genome shotgun sequence
• contig00072, whole genome shotgun sequence
• contig00050, whole genome shotgun sequence
• contig00094, whole genome shotgun sequence
• contig00149, whole genome shotgun sequence
• contig00015, whole genome shotgun sequence
• contig00053, whole genome shotgun sequence
• contig00075, whole genome shotgun sequence
• contig00081, whole genome shotgun sequence
• contig00058, whole genome shotgun sequence
• contig00098, whole genome shotgun sequence
• contig00022, whole genome shotgun sequence
• contig00078, whole genome shotgun sequence
• contig00105, whole genome shotgun sequence
• contig00100, whole genome shotgun sequence
• contig00001, whole genome shotgun sequence
• contig00255, whole genome shotgun sequence
• contig00128, whole genome shotgun sequence
• contig00196, whole genome shotgun sequence
• contig00041, whole genome shotgun sequence
• contig00157, whole genome shotgun sequence
• contig00028, whole genome shotgun sequence
• contig00236, whole genome shotgun sequence
• contig00035, whole genome shotgun sequence
• contig00217, whole genome shotgun sequence
• contig00253, whole genome shotgun sequence
• contig00051, whole genome shotgun sequence
• contig00111, whole genome shotgun sequence
• contig00121, whole genome shotgun sequence
• contig00086, whole genome shotgun sequence
• contig00244, whole genome shotgun sequence
• contig00077, whole genome shotgun sequence
• contig00222, whole genome shotgun sequence
• contig00054, whole genome shotgun sequence
• contig00025, whole genome shotgun sequence
• contig00059, whole genome shotgun sequence
• contig00016, whole genome shotgun sequence
• contig00164, whole genome shotgun sequence
• contig00008, whole genome shotgun sequence
• contig00125, whole genome shotgun sequence
• contig00047, whole genome shotgun sequence
• contig00004, whole genome shotgun sequence
• contig00138, whole genome shotgun sequence
• contig00074, whole genome shotgun sequence
• contig00011, whole genome shotgun sequence
• contig00173, whole genome shotgun sequence
• contig00049, whole genome shotgun sequence
• contig00006, whole genome shotgun sequence
• contig00045, whole genome shotgun sequence
• contig00249, whole genome shotgun sequence

Taxonomy

cellular organisms
» Bacteria
» Firmicutes
» Bacilli
» Lactobacillales
» Lactobacillaceae
» Lactobacillus
» Lactobacillus delbrueckii
» Lactobacillus delbrueckii subsp. bulgaricus

Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4

hsdM - type I restriction-modification system, M subunit

Analysis Tools

View alignment of region with nucmer

Design primers within region using Primer3Plus

View region in Artemis

Retrieve hsdM nucleotide sequence in FASTA format

Retrieve hsdM protein sequence in FASTA format

Retrieve HMPREF9264_0662 nucleotide sequence with 10 50 100 200 400 600 800 1000 2000 bp. flanking sequence
Include translation of coding sequence
Include complementary strand.

Run NCBI BLASTP PSI-BLAST against the Non-redundant protein sequences (nr) SwissProt Protein Data Bank (PDB) database using HMPREF9264_0662 protein sequence
(optional - restrict search to taxonomic group: root cellular organisms Bacteria Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Lactobacillus delbrueckii Lactobacillus delbrueckii subsp. bulgaricus )

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Annotation

Product:

type I restriction-modification system, M subunit

GenBank ID: ZP_07093523.1

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