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Lactobacillus iners ATCC 55195 contig00001, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS trxB ZP_07905961.1 HMPREF9223_0001 pyridine nucleotide-disulfide oxidoreductase 94 1047 1
CDS dedA ZP_07905962.1 HMPREF9223_0002 DedA family membrane protein 1075 1719 1
CDS - ZP_07905963.1 HMPREF9223_0003 conserved hypothetical protein 1848 2033 -1
CDS - ZP_07905964.1 HMPREF9223_0004 integral membrane protein 2267 2875 -1
CDS - ZP_07905965.1 HMPREF9223_0005 HAD-superfamily hydrolase 2875 3654 -1
CDS - ZP_07905966.1 HMPREF9223_0006 transcriptional regulator 3657 4202 -1
CDS - ZP_07905967.1 HMPREF9223_0007 conserved hypothetical protein 4203 4535 -1
CDS glpQ ZP_07905968.1 HMPREF9223_0008 glycerophosphodiester phosphodiesterase 4643 6010 1
CDS pepV ZP_07905969.1 HMPREF9223_0009 dipeptidase PepV 6025 7422 1
CDS ccpA ZP_07905970.1 HMPREF9223_0010 catabolite control protein A 7502 8578 -1
CDS - ZP_07905971.1 HMPREF9223_0011 xaa-Pro dipeptidase 8652 9758 1
CDS - ZP_07905972.1 HMPREF9223_0012 conserved hypothetical protein 9815 10186 -1
CDS - ZP_07905973.1 HMPREF9223_0013 methyl-accepting chemotaxis family protein 10158 10595 -1
CDS - ZP_07905974.1 HMPREF9223_0014 mechanosensitive ion channel 10720 11565 1
CDS rnpA ZP_07905975.1 HMPREF9223_0015 ribonuclease PH/Ham1 protein 11591 12211 -1
CDS murI ZP_07905976.1 HMPREF9223_0016 glutamate racemase 12229 13014 -1
CDS - ZP_07905977.1 HMPREF9223_0017 conserved hypothetical protein 13110 13508 1
CDS trxA ZP_07905978.1 HMPREF9223_0018 thioredoxin 13635 13946 -1
CDS mutS ZP_07905979.1 HMPREF9223_0019 DNA mismatch repair protein MutS 14043 16403 -1
CDS - ZP_07905980.1 HMPREF9223_0020 protein of hypothetical function UPF0473 16511 16822 -1
CDS - ZP_07905981.1 HMPREF9223_0021 crossover junction endodeoxyribonuclease 16829 17260 -1
CDS - ZP_07905982.1 HMPREF9223_0022 protein of hypothetical function DUF965 17260 17517 -1
CDS alaS ZP_07905983.1 HMPREF9223_0023 alanine--tRNA ligase 17597 20317 -1
CDS srmB ZP_07905984.1 HMPREF9223_0024 DEAD/DEAH box family ATP-dependent RNA helicase 20574 21839 -1
CDS - ZP_07905985.1 HMPREF9223_0025 DHH family protein 21820 22776 -1
CDS dinB ZP_07905986.1 HMPREF9223_0026 DNA-directed DNA polymerase IV 22832 23941 -1
CDS zwf ZP_07905987.1 HMPREF9223_0027 glucose-6-phosphate dehydrogenase 23942 25390 -1
CDS yajC ZP_07905988.1 HMPREF9223_0028 preprotein translocase 25495 25851 -1
CDS ruvB ZP_07905989.1 HMPREF9223_0029 crossover junction ATP-dependent DNA helicase RuvB 25912 26916 -1
CDS ruvA ZP_07905990.1 HMPREF9223_0030 crossover junction ATP-dependent DNA helicase RuvA 26933 27517 -1
CDS hexB ZP_07905991.1 HMPREF9223_0031 DNA mismatch repair protein HexB 27539 29416 -1
CDS hexA ZP_07905992.1 HMPREF9223_0032 DNA mismatch repair protein HexA 29422 31986 -1
CDS groEL ZP_07905993.1 HMPREF9223_0033 chaperone GroEL 32130 33764 -1
CDS groES ZP_07905994.1 HMPREF9223_0034 chaperone GroES 33790 34074 -1
CDS rex ZP_07905995.1 HMPREF9223_0035 redox-sensing transcriptional repressor Rex 34200 34829 -1
CDS - ZP_07905996.1 HMPREF9223_0036 ABC superfamily ATP binding cassette transporter, ABC protein 35016 36929 1
CDS - ZP_07905997.1 HMPREF9223_0037 conserved hypothetical protein 36985 37521 -1
CDS - ZP_07905998.1 HMPREF9223_0038 conserved hypothetical protein 37508 38161 -1
CDS - ZP_07905999.1 HMPREF9223_0039 hypothetical protein 38154 39032 -1
CDS - ZP_07906000.1 HMPREF9223_0040 conserved hypothetical protein 39118 39279 1
CDS pyraB ZP_07906001.1 HMPREF9223_0041 carbamoyl-phosphate synthase 39402 42593 -1
CDS pyraA ZP_07906002.1 HMPREF9223_0042 carbamoyl-phosphate synthase 42562 43644 -1
CDS pyrC ZP_07906003.1 HMPREF9223_0043 dihydroorotase 43644 44921 -1
CDS pyrB ZP_07906004.1 HMPREF9223_0044 aspartate carbamoyltransferase, catalytic subunit 44921 45862 -1
CDS upp ZP_07906005.1 HMPREF9223_0045 uracil phosphoribosyltransferase 46001 46543 -1
CDS pyrD ZP_07906006.1 HMPREF9223_0046 dihydroorotate oxidase 46589 47509 -1
CDS - ZP_07906007.1 HMPREF9223_0047 MFS family major facilitator transporter 47515 48789 -1
CDS pyrF ZP_07906008.1 HMPREF9223_0048 orotidine 5'-phosphate decarboxylase 49003 49710 1
CDS pyrE ZP_07906009.1 HMPREF9223_0049 orotate phosphoribosyltransferase 49712 50347 1
CDS gpm ZP_07906010.1 HMPREF9223_0050 phosphoglycerate mutase 50441 51091 1
CDS hflX ZP_07906011.1 HMPREF9223_0051 GTP-binding protein HflX 51125 52408 1
CDS - ZP_07906012.1 HMPREF9223_0052 hypothetical protein 52525 53280 -1
CDS - ZP_07906013.1 HMPREF9223_0053 ABC superfamily ATP binding cassette transporter, ABC protein 53277 53936 -1
CDS purB ZP_07906014.1 HMPREF9223_0054 adenylosuccinate lyase 54050 55345 -1
CDS purA ZP_07906015.1 HMPREF9223_0055 adenylosuccinate synthase 55349 56638 -1
CDS guaC ZP_07906016.1 HMPREF9223_0056 GMP reductase 56830 57822 1
CDS hsdR ZP_07906017.1 HMPREF9223_0057 type I restriction-modification system R subunit 58219 59949 1
CDS nadC ZP_07906018.1 HMPREF9223_0058 nicotinate-nucleotide pyrophosphorylase 60221 60481 -1
CDS - ZP_07906019.1 HMPREF9223_0059 conserved hypothetical protein 60723 61043 -1