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Lactobacillus iners ATCC 55195 contig00004, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS racD ZP_07906026.1 HMPREF9223_0066 aspartate racemase 99 845 -1
CDS murE ZP_07906027.1 HMPREF9223_0067 UDP-N-acetylmuramoylalanyl-D-glutamate-2, 6-diaminopimelate ligase 869 2428 -1
CDS baeS ZP_07906028.1 HMPREF9223_0068 sensor histidine kinase 2463 3644 -1
CDS - ZP_07906029.1 HMPREF9223_0069 DNA-binding response regulator 3634 4371 -1
CDS gcp ZP_07906030.1 HMPREF9223_0070 O-sialoglycoprotein endopeptidase 4355 5401 -1
CDS - ZP_07906031.1 HMPREF9223_0071 ribosomal protein Ala-acetyltransferase 5421 5948 -1
CDS - ZP_07906032.1 HMPREF9223_0072 M22 family O-sialoglycoprotein endopeptidase 5932 6669 -1
CDS - ZP_07906033.1 HMPREF9223_0073 acyl-ACP thioesterase 6683 7402 -1
CDS - ZP_07906034.1 HMPREF9223_0074 tetrapyrrole methylase 7412 8266 -1
CDS yabA ZP_07906035.1 HMPREF9223_0075 initiation-control protein YabA 8269 8631 -1
CDS - ZP_07906036.1 HMPREF9223_0076 DNA polymerase III 8638 9495 -1
CDS tmk ZP_07906037.1 HMPREF9223_0077 thymidylate kinase 9512 10216 -1
CDS - ZP_07906038.1 HMPREF9223_0078 conserved hypothetical protein 10213 10446 -1
CDS recR ZP_07906039.1 HMPREF9223_0079 recombination protein R 10443 11042 -1
CDS yaaK ZP_07906040.1 HMPREF9223_0080 conserved hypothetical protein 11042 11398 -1
CDS tadA ZP_07906041.1 HMPREF9223_0082 tRNA-specific adenosine deaminase 13350 13826 -1
CDS rsmC ZP_07906042.1 HMPREF9223_0083 methyltransferase domain protein 13845 14459 -1
CDS - ZP_07906043.1 HMPREF9223_0084 conserved hypothetical protein 14505 15134 -1
CDS - ZP_07906044.1 HMPREF9223_0085 conserved hypothetical protein 15157 15618 -1
CDS - ZP_07906045.1 HMPREF9223_0086 conserved hypothetical protein 15919 16371 -1
CDS - ZP_07906046.1 HMPREF9223_0087 integral membrane protein 16373 17185 -1
CDS - ZP_07906047.1 HMPREF9223_0088 conserved hypothetical protein 17148 17552 -1
CDS - ZP_07906048.1 HMPREF9223_0089 conserved hypothetical protein 17707 18306 1
CDS lytR ZP_07906049.1 HMPREF9223_0090 transcriptional regulator 18338 19444 -1
CDS - ZP_07906050.1 HMPREF9223_0091 hypothetical protein 19425 19553 1
CDS pepF ZP_07906051.1 HMPREF9223_0092 oligoendopeptidase F 19581 21380 1
CDS dhaK ZP_07906052.1 HMPREF9223_0093 dihydroxyacetone kinase 21495 22508 1
CDS dhaL ZP_07906053.1 HMPREF9223_0094 PTS-dependent dihydroxyacetone kinase 22521 23105 1
CDS - ZP_07906054.1 HMPREF9223_0095 PTS-dependent dihydroxyacetone kinase 23102 23470 1
CDS - ZP_07906055.1 HMPREF9223_0096 aldose epimerase 23649 24521 -1
CDS - ZP_07906056.1 HMPREF9223_0097 conserved hypothetical protein 24705 25382 -1
CDS lacB ZP_07906057.1 HMPREF9223_0098 galactose-6-phosphate isomerase LacB subunit 25395 25970 -1
CDS lacA ZP_07906058.1 HMPREF9223_0099 galactose-6-phosphate isomerase LacA subunit 25988 26416 -1
CDS lacR ZP_07906059.1 HMPREF9223_0100 lactose PTS family porter repressor 26426 27193 -1
CDS lacD ZP_07906060.1 HMPREF9223_0101 tagatose-bisphosphate aldolase 27303 28295 -1
CDS - ZP_07906061.1 HMPREF9223_0102 conserved hypothetical protein 28344 28562 -1
CDS - ZP_07906062.1 HMPREF9223_0103 PTS family galactitol (gat) porter component IIC 28641 30053 -1
CDS - ZP_07906063.1 HMPREF9223_0104 PTS family porter, galacitol-specific IIB component 30089 30403 -1
CDS - ZP_07906064.1 HMPREF9223_0105 PTS family fructose/mannitol porter component IIA 30434 30922 -1
CDS - ZP_07906065.1 HMPREF9223_0106 conserved hypothetical protein 31124 33142 -1
CDS - ZP_07906066.1 HMPREF9223_0107 PTS family mannose/fructose/sorbose porter component IIA 33207 33605 -1
CDS - ZP_07906067.1 HMPREF9223_0108 PTS family mannose/fructose/sorbose porter component IID 33624 34466 -1
CDS - ZP_07906068.1 HMPREF9223_0109 PTS family mannose/fructose/sorbose porter component IIC 34429 35334 -1
CDS levE ZP_07906069.1 HMPREF9223_0110 PTS family mannose/fructose/sorbose porter, IIB component 35346 35837 -1
CDS nagA ZP_07906070.1 HMPREF9223_0111 N-acetylglucosamine-6-phosphate deacetylase 35916 37088 -1
CDS agaS ZP_07906071.1 HMPREF9223_0112 sugar isomerase protein AgaS 37100 38269 -1
CDS - ZP_07906072.1 HMPREF9223_0113 GntR family transcriptional regulator 38291 39001 -1
CDS - ZP_07906073.1 HMPREF9223_0114 conserved hypothetical protein 39699 40406 -1
CDS - ZP_07906074.1 HMPREF9223_0115 type III restriction-modification enzyme 40422 43061 -1
CDS - ZP_07906075.1 HMPREF9223_0116 type III restriction-modification system: methylase 43064 45028 -1
CDS sthIM ZP_07906076.1 HMPREF9223_0117 adenine specific DNA methylase Mod 45033 46949 -1
CDS pfo ZP_07906077.1 HMPREF9223_0118 perfringolysin O 47109 48668 -1
CDS - ZP_07906078.1 HMPREF9223_0119 nucleoside deoxyribosyltransferase 48870 49346 1
CDS ptsI ZP_07906079.1 HMPREF9223_0120 PTS family porter, enzyme I 49475 51211 -1
CDS ptsH ZP_07906080.1 HMPREF9223_0121 PTS family porter component HPr 51211 51477 -1
CDS - ZP_07906081.1 HMPREF9223_0122 conserved hypothetical protein 51605 51793 -1
CDS clpE ZP_07906082.1 HMPREF9223_0123 ATP-dependent Clp protease ATP-binding subunit ClpE 51874 54051 1
CDS - ZP_07906083.1 HMPREF9223_0124 conserved hypothetical protein 54106 54384 1
CDS - ZP_07906084.1 HMPREF9223_0125 band 7/mec-2 family protein 54567 55448 -1
CDS - ZP_07906085.1 HMPREF9223_0126 ABC superfamily ATP binding cassette transporter membrane-spanning subunit 55598 56407 -1
CDS nodI ZP_07906086.1 HMPREF9223_0127 nodulation ATP-binding protein I 56400 57311 -1
CDS amyX ZP_07906087.1 HMPREF9223_0128 thermostable pullulanase 57589 62775 -1
CDS murC ZP_07906088.1 HMPREF9223_0129 UDP-N-acetylmuramate--L-alanine ligase 62897 64219 -1
CDS pheT ZP_07906089.1 HMPREF9223_0130 phenylalanyl-tRNA synthetase beta subunit 64254 64907 -1
CDS trxA2 ZP_07906090.1 HMPREF9223_0131 thioredoxin 64923 65243 -1
CDS trmB ZP_07906091.1 HMPREF9223_0132 tRNA (guanine-N(7)-)-methyltransferase 65262 65912 -1
CDS - ZP_07906092.1 HMPREF9223_0133 ABC superfamily ATP binding cassette transporter permease 65924 67120 -1
CDS - ZP_07906093.1 HMPREF9223_0134 ABC superfamily ATP binding cassette transporter, ABC protein 67104 67853 -1
CDS hit ZP_07906094.1 HMPREF9223_0135 HIT family protein 67944 68381 1
CDS - ZP_07906095.1 HMPREF9223_0136 hypothetical protein 68393 68704 1
CDS prsA ZP_07906096.1 HMPREF9223_0137 peptidyl-prolyl cis-trans isomerase 68795 69688 1
CDS cbf ZP_07906097.1 HMPREF9223_0138 CMP-binding-factor 1 69815 70792 -1
CDS - ZP_07906098.1 HMPREF9223_0139 conserved hypothetical protein 70794 73190 -1
CDS - ZP_07906099.1 HMPREF9223_0140 phosphoesterase 73174 74397 -1
CDS - ZP_07906100.1 HMPREF9223_0141 conserved hypothetical protein 74407 74757 -1
CDS pbp2A ZP_07906101.1 HMPREF9223_0142 penicillin-binding protein 2A 74776 76854 -1
CDS rluD ZP_07906102.1 HMPREF9223_0143 ribosomal large subunit pseudouridine synthase D 76915 77793 1
CDS fba ZP_07906103.1 HMPREF9223_0144 fructose-bisphosphate aldolase class-II 77880 78794 -1
CDS argS ZP_07906104.1 HMPREF9223_0145 arginine--tRNA ligase 78890 80566 -1
CDS dacA ZP_07906105.1 HMPREF9223_0146 serine-type D-Ala-D-Ala carboxypeptidase 80828 82117 -1
CDS agl ZP_07906106.1 HMPREF9223_0147 alpha-glucosidase 82089 84374 -1
CDS - ZP_07906107.1 HMPREF9223_0148 carbohydrate kinase 84378 85247 -1
tRNA - - HMPREF9223_t0001 tRNA-Leu 85328 85411 1
CDS - ZP_07906108.1 HMPREF9223_0149 class II aldolase/adducin domain protein 85613 86317 -1
CDS - ZP_07906109.1 HMPREF9223_0150 hypothetical protein 86389 86577 -1
CDS pts36C ZP_07906110.1 HMPREF9223_0151 PTS family galactitol porter IIC component 86594 88159 -1
CDS pts36B ZP_07906111.1 HMPREF9223_0152 PTS family galactitol porter IIB component 88178 88495 -1
CDS pts36A ZP_07906112.1 HMPREF9223_0153 PTS family galactitol porter IIA component 88504 88974 -1
CDS - ZP_07906113.1 HMPREF9223_0154 transcription regulator 89137 89901 1
CDS - ZP_07906114.1 HMPREF9223_0155 phosphoglycerate mutase 90046 90612 -1
CDS - ZP_07906115.1 HMPREF9223_0156 polysaccharide biosynthesis family protein 90636 92264 -1
CDS leuS ZP_07906116.1 HMPREF9223_0157 leucine--tRNA ligase 92286 94592 -1
CDS - ZP_07906117.1 HMPREF9223_0158 MFS family major facilitator transporter 94986 96452 -1
CDS metK ZP_07906118.1 HMPREF9223_0159 methionine adenosyltransferase 96445 97650 -1
tRNA - - HMPREF9223_t0002 tRNA-Val 97771 97843 -1
tRNA - - HMPREF9223_t0003 tRNA-Glu 97848 97919 -1