xBASE Logo
About | Contact | Home

Lactobacillus iners ATCC 55195 contig00008, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_07906362.1 HMPREF9223_0403 conserved hypothetical protein 245 508 1
CDS - ZP_07906363.1 HMPREF9223_0404 MarR family transcriptional regulator 513 710 1
CDS - ZP_07906364.1 HMPREF9223_0405 conserved hypothetical protein 763 939 1
CDS - ZP_07906365.1 HMPREF9223_0406 ISHne1 transposase 942 1157 1
CDS - ZP_07906366.1 HMPREF9223_0407 YjcQ protein 1144 1512 1
CDS - ZP_07906367.1 HMPREF9223_0408 chaperonin 1844 2587 1
CDS hrcA ZP_07906368.1 HMPREF9223_0409 heat-inducible transcription repressor HrcA 2822 3904 1
CDS grpE ZP_07906369.1 HMPREF9223_0410 heat shock protein GrpE 4050 4463 1
CDS dnaK ZP_07906370.1 HMPREF9223_0411 chaperone DnaK 4480 6321 1
CDS dnaJ ZP_07906371.1 HMPREF9223_0412 chaperone DnaJ 6390 7523 1
CDS lepA ZP_07906372.1 HMPREF9223_0413 GTP-binding protein LepA 7701 9551 1
CDS srtA ZP_07906373.1 HMPREF9223_0414 sortase SrtA 9553 10065 1
CDS - ZP_07906374.1 HMPREF9223_0415 sortase 10062 10238 1
CDS recJ ZP_07906375.1 HMPREF9223_0416 single-stranded-DNA-specific exonuclease RecJ 10235 12520 1
CDS apt ZP_07906376.1 HMPREF9223_0417 adenine phosphoribosyltransferase 12616 13143 1
CDS thyA ZP_07906377.1 HMPREF9223_0418 thymidylate synthase 13207 14163 1
CDS folA ZP_07906378.1 HMPREF9223_0419 dihydrofolate reductase 14185 14685 1
CDS - ZP_07906379.1 HMPREF9223_0420 conserved hypothetical protein 14716 15051 1
CDS trmU ZP_07906380.1 HMPREF9223_0421 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 15062 16189 1
CDS pgm ZP_07906381.1 HMPREF9223_0422 phosphoglycerate mutase 16218 16874 1
CDS - ZP_07906382.1 HMPREF9223_0423 TPR repeat-containing protein 16874 17506 1
CDS - ZP_07906383.1 HMPREF9223_0424 exodeoxyribonuclease V alpha subunit 17534 19876 1
CDS - ZP_07906384.1 HMPREF9223_0425 metallo-beta-lactamase superfamily protein 19915 21594 -1
CDS - ZP_07906385.1 HMPREF9223_0426 conserved hypothetical protein 21603 21827 -1
CDS def ZP_07906386.1 HMPREF9223_0427 peptide deformylase 21964 22518 -1
CDS typA ZP_07906387.1 HMPREF9223_0428 GTP-binding protein TypA 22705 24603 1
CDS ftsW ZP_07906388.1 HMPREF9223_0429 FtsW/RodA/SpoVE family cell division protein 24747 25949 1
CDS - ZP_07906389.1 HMPREF9223_0430 conserved hypothetical protein 25927 26259 1
CDS rsmD ZP_07906390.1 HMPREF9223_0431 methyltransferase 26262 26810 1
CDS coaD ZP_07906391.1 HMPREF9223_0432 pantetheine-phosphate adenylyltransferase 26797 27294 1
CDS - ZP_07906392.1 HMPREF9223_0433 PDZ domain protein 27296 28327 1
CDS celA ZP_07906393.1 HMPREF9223_0434 competence protein CelA 28361 29002 1
CDS comEC ZP_07906394.1 HMPREF9223_0435 ComE operon protein ComEC 28971 31250 1
CDS holA ZP_07906395.1 HMPREF9223_0436 DNA-directed DNA polymerase III delta subunit 31247 32233 1
CDS rpsT ZP_07906396.1 HMPREF9223_0437 30S ribosomal protein S20 32282 32536 -1
CDS rpsO ZP_07906397.1 HMPREF9223_0438 30S ribosomal protein S15 32728 32997 1
CDS - ZP_07906398.1 HMPREF9223_0439 metallo-beta-lactamase superfamily protein 33184 35070 1
CDS - ZP_07906399.1 HMPREF9223_0440 conserved hypothetical protein 35039 35908 1
CDS tuf ZP_07906400.1 HMPREF9223_0441 translation elongation factor Tu 36078 37268 1
CDS tig ZP_07906401.1 HMPREF9223_0442 trigger factor 37395 38723 1
CDS clpX ZP_07906402.1 HMPREF9223_0443 ATP-dependent Clp protease ATP-binding subunit 38819 40120 1
CDS ysxC ZP_07906403.1 HMPREF9223_0444 ribosome biogenesis GTP-binding protein YsxC 40110 40697 1
CDS - ZP_07906404.1 HMPREF9223_0445 conserved hypothetical protein 40727 41287 1
CDS sdaB ZP_07906405.1 HMPREF9223_0446 L-serine dehydratase beta subunit 41368 42030 1
CDS sdaA ZP_07906406.1 HMPREF9223_0447 L-serine ammonia-lyase alpha subunit 42051 42932 1
CDS yitW ZP_07906407.1 HMPREF9223_0448 N-6 adenine-specific DNA methylase YitW 42925 43248 1
CDS - ZP_07906408.1 HMPREF9223_0449 conserved hypothetical protein 43285 43662 1
CDS - ZP_07906409.1 HMPREF9223_0450 inosine-uridine preferring nucleoside hydrolase 43850 44785 -1
CDS uvrC ZP_07906410.1 HMPREF9223_0451 excinuclease ABC subunit C 44906 46723 1
CDS obg ZP_07906411.1 HMPREF9223_0452 Spo0B-associated GTP-binding protein 46811 48094 1
CDS - ZP_07906412.1 HMPREF9223_0453 acyltransferase 48111 50033 1
CDS rnz ZP_07906413.1 HMPREF9223_0454 ribonuclease Z 50040 50966 1
CDS kduD ZP_07906414.1 HMPREF9223_0455 short-chain dehydrogenase/reductase family oxidoreductase 50971 51765 1
CDS rpmF ZP_07906415.1 HMPREF9223_0456 50S ribosomal protein L32 51889 52080 1
CDS - ZP_07906416.1 HMPREF9223_0457 conserved hypothetical protein 52185 52442 -1
CDS dnaE ZP_07906417.1 HMPREF9223_0458 DNA-directed DNA polymerase III alpha subunit 52593 55715 1
CDS pfkA ZP_07906418.1 HMPREF9223_0459 6-phosphofructokinase 55854 56813 1
CDS pyk ZP_07906419.1 HMPREF9223_0460 pyruvate kinase 56851 58620 1
CDS yitL ZP_07906420.1 HMPREF9223_0461 nucleic acid-binding protein YitL 58724 59617 1
CDS xerD ZP_07906421.1 HMPREF9223_0462 integrase/recombinase XerD 59607 60500 1
CDS - ZP_07906422.1 HMPREF9223_0463 putative riboflavin biosynthesis acetyltransferase RibT 60469 60870 1
CDS scpA ZP_07906423.1 HMPREF9223_0464 segregation and condensation protein A 60867 61598 1
CDS scpB ZP_07906424.1 HMPREF9223_0465 segregation and condensation protein B 61600 62166 1
CDS rluB ZP_07906425.1 HMPREF9223_0466 ribosomal large subunit pseudouridine synthase B 62185 62904 1
CDS - ZP_07906426.1 HMPREF9223_0467 hypothetical protein 62971 63756 1
CDS - ZP_07906427.1 HMPREF9223_0468 conserved hypothetical protein 64027 64620 1
CDS cmk ZP_07906428.1 HMPREF9223_0469 cytidylate kinase 64708 65370 1
CDS rpsA ZP_07906429.1 HMPREF9223_0470 30S ribosomal protein S1 65433 66620 1
CDS engA ZP_07906430.1 HMPREF9223_0471 ribosome-associated GTPase EngA 66690 67997 1
CDS hup ZP_07906431.1 HMPREF9223_0472 DNA-binding protein HU 68144 68419 1
CDS - ZP_07906432.1 HMPREF9223_0473 tetratricopeptide repeat family protein 68509 69765 1
CDS nylA ZP_07906433.1 HMPREF9223_0474 amidase 69809 71299 1
CDS - ZP_07906434.1 HMPREF9223_0475 YitT family protein 71370 72302 -1
CDS papS ZP_07906435.1 HMPREF9223_0476 poly A polymerase 72235 73611 1
CDS hlyIII ZP_07906436.1 HMPREF9223_0477 hemolysin III 73707 74372 -1
CDS - ZP_07906437.1 HMPREF9223_0478 DegV family protein 74498 75349 1
CDS - ZP_07906438.1 HMPREF9223_0479 conserved hypothetical protein 75391 75585 1
CDS ctpA ZP_07906439.1 HMPREF9223_0480 carboxy-terminal processing protease CtpA 75590 76972 1
CDS ylqF ZP_07906440.1 HMPREF9223_0481 ribosome biogenesis GTP-binding protein YlqF 77185 78030 1
CDS rnhB ZP_07906441.1 HMPREF9223_0482 ribonuclease HII 78027 78779 1
CDS - ZP_07906442.1 HMPREF9223_0483 Rossmann fold nucleotide-binding protein for DNA uptake 78828 79673 1
CDS topA ZP_07906443.1 HMPREF9223_0484 DNA topoisomerase TopA 79743 81830 1
CDS trmFO ZP_07906444.1 HMPREF9223_0485 tRNA:M(5)U-54 methyltransferase 81880 83193 1
CDS xerC ZP_07906445.1 HMPREF9223_0486 tyrosine recombinase XerC 83196 84119 1
CDS hslV ZP_07906446.1 HMPREF9223_0487 ATP-dependent protease HslVU 84123 84647 1
CDS hslU ZP_07906447.1 HMPREF9223_0488 ATP-dependent hsl protease ATP-binding subunit HslU 84637 86052 1
CDS - ZP_07906448.1 HMPREF9223_0489 aldose epimerase 86069 86959 1