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Lactobacillus iners ATCC 55195 contig00009, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS plsY ZP_07906449.1 HMPREF9223_0490 acyl-phosphate glycerol 3-phosphate acyltransferase 15 707 -1
CDS parE ZP_07906450.1 HMPREF9223_0491 DNA topoisomerase (ATP-hydrolyzing) ParE 755 2698 1
CDS parC ZP_07906451.1 HMPREF9223_0492 DNA topoisomerase (ATP-hydrolyzing) ParC 2724 5219 1
CDS ppaC ZP_07906452.1 HMPREF9223_0493 inorganic diphosphatase PpaC 5298 6233 1
CDS ppiB ZP_07906453.1 HMPREF9223_0494 peptidyl-prolyl cis-trans isomerase 6354 6956 1
CDS - ZP_07906454.1 HMPREF9223_0495 DegV family protein 7044 8018 -1
CDS fbpA ZP_07906455.1 HMPREF9223_0496 fibronectin/fibrinogen binding protein 8110 9879 1
CDS - ZP_07906456.1 HMPREF9223_0497 carbamoyl-phosphate synthase 9874 11163 -1
CDS carB ZP_07906457.1 HMPREF9223_0498 carbamoyl-phosphate synthase, large subunit 11136 13040 -1
CDS carA ZP_07906458.1 HMPREF9223_0499 carbamoyl-phosphate synthase, small subunit 13047 14108 -1
CDS rluD2 ZP_07906459.1 HMPREF9223_0500 ribosomal large subunit pseudouridine synthase D 14113 15048 -1
CDS lspA ZP_07906460.1 HMPREF9223_0501 signal peptidase II 15056 15532 -1
CDS fhs ZP_07906461.1 HMPREF9223_0502 formate-tetrahydrofolate ligase 15533 17209 -1
CDS - ZP_07906462.1 HMPREF9223_0503 conserved hypothetical protein 17209 17556 -1
CDS - ZP_07906463.1 HMPREF9223_0504 site-specific DNA-methyltransferase 17649 18773 -1
CDS - ZP_07906464.1 HMPREF9223_0505 cell division initiation protein 19246 19587 -1
CDS - ZP_07906465.1 HMPREF9223_0506 conserved hypothetical protein 19663 20202 -1
CDS recU ZP_07906466.1 HMPREF9223_0507 recombination protein U 20275 20865 1
CDS pbp1A ZP_07906467.1 HMPREF9223_0508 penicillin-binding protein 1A 20870 23176 1
CDS nth ZP_07906468.1 HMPREF9223_0509 endonuclease III 23227 23853 -1
CDS dnaD ZP_07906469.1 HMPREF9223_0510 DNA replication protein DnaD 23879 24514 -1
CDS asnS ZP_07906470.1 HMPREF9223_0511 asparagine--tRNA ligase 24575 25876 -1
CDS - ZP_07906471.1 HMPREF9223_0512 conserved hypothetical protein 25931 26449 -1
CDS dinG ZP_07906472.1 HMPREF9223_0513 ATP-dependent DNA helicase 26446 29256 -1
CDS addA ZP_07906473.1 HMPREF9223_0514 ATP-dependent exonuclease subunit A 29271 31610 -1
CDS - ZP_07906474.1 HMPREF9223_0515 ATP-dependent exonuclease subunit A 31604 32890 -1
CDS addB ZP_07906475.1 HMPREF9223_0516 ATP-dependent exonuclease subunit B 32883 36356 -1
CDS mvaK ZP_07906476.1 HMPREF9223_0517 mevalonate kinase 36425 37345 1
CDS mvaD ZP_07906477.1 HMPREF9223_0518 diphosphomevalonate decarboxylase 37360 38337 1
CDS mvaK2 ZP_07906478.1 HMPREF9223_0519 phosphomevalonate kinase 38349 39422 1
CDS fni ZP_07906479.1 HMPREF9223_0520 isopentenyl-diphosphate delta-isomerase 39435 40460 1
CDS - ZP_07906480.1 HMPREF9223_0521 NOL1/NOP2/sun family protein 40495 41904 -1
CDS - ZP_07906481.1 HMPREF9223_0522 conserved hypothetical protein 41904 42896 -1
CDS - ZP_07906482.1 HMPREF9223_0523 SAM-dependent methyltransferase 42871 43632 -1
CDS spsB ZP_07906483.1 HMPREF9223_0524 signal peptidase IB 43705 44307 1
CDS - ZP_07906484.1 HMPREF9223_0525 peptidase S26A 44568 45428 -1
CDS - ZP_07906485.1 HMPREF9223_0526 DNA-damage-inducibile protein 45495 45779 1
CDS msrA ZP_07906486.1 HMPREF9223_0527 methionine sulfoxide reductase A 46009 46899 -1
CDS - ZP_07906487.1 HMPREF9223_0528 ABC superfamily ATP binding cassette transporter permease 47005 47727 -1
CDS - ZP_07906488.1 HMPREF9223_0529 ABC superfamily ATP binding cassette transporter, ABC protein 47745 48434 -1
CDS gntR ZP_07906489.1 HMPREF9223_0530 GntR family transcriptional regulator 48427 48801 -1
CDS pepT2 ZP_07906490.1 HMPREF9223_0531 tripeptide aminopeptidase 49112 50443 -1
CDS - ZP_07906491.1 HMPREF9223_0532 NIF3 family protein 50376 51173 -1
CDS - ZP_07906492.1 HMPREF9223_0533 SAM-dependent methyltransferase 51160 51843 -1
CDS rpoD ZP_07906493.1 HMPREF9223_0534 RNA polymerase sigma factor rpoD 51904 53052 -1
CDS dnaG ZP_07906494.1 HMPREF9223_0535 DNA primase 53064 54866 -1
CDS glyS ZP_07906495.1 HMPREF9223_0536 glycyl-tRNA synthetase beta subunit 54885 56954 -1
CDS glyQ ZP_07906496.1 HMPREF9223_0537 glycyl-tRNA synthetase alpha subunit 56956 57861 -1
CDS recO ZP_07906497.1 HMPREF9223_0538 DNA repair protein RecO 58116 58781 -1
CDS era ZP_07906498.1 HMPREF9223_0539 GTP-binding protein Era 58865 59767 -1
CDS - ZP_07906499.1 HMPREF9223_0540 metal-dependent hydrolase 59783 60310 -1
CDS phoH ZP_07906500.1 HMPREF9223_0541 PhoH family protein 60307 61269 -1
CDS - ZP_07906501.1 HMPREF9223_0542 GatB/Yqey family protein 61289 61732 -1
CDS rpsU ZP_07906502.1 HMPREF9223_0543 30S ribosomal protein S21 61829 62005 -1
CDS - ZP_07906503.1 HMPREF9223_0544 protein of hypothetical function DUF299 62207 63040 1
CDS - ZP_07906504.1 HMPREF9223_0545 YitT family protein 63092 63970 -1
CDS nqr ZP_07906505.1 HMPREF9223_0546 flavin reductase 64096 64668 -1
CDS aspS ZP_07906506.1 HMPREF9223_0547 aspartate--tRNA ligase 64749 66587 -1
CDS hisS ZP_07906507.1 HMPREF9223_0548 histidine--tRNA ligase 66590 67876 -1
CDS dtd ZP_07906508.1 HMPREF9223_0549 D-tyrosyl-tRNA(Tyr) deacylase 68123 68560 -1
CDS relA ZP_07906509.1 HMPREF9223_0550 GTP diphosphokinase 68560 70428 -1
CDS - ZP_07906510.1 HMPREF9223_0551 GTP diphosphokinase 70479 70811 -1
CDS - ZP_07906511.1 HMPREF9223_0552 conserved hypothetical protein 70821 71201 -1
CDS prmA ZP_07906512.1 HMPREF9223_0553 ribosomal protein L11 methyltransferase 71238 72170 -1
CDS - ZP_07906513.1 HMPREF9223_0554 YbaK/EbsC family protein 72232 72738 1
CDS - ZP_07906514.1 HMPREF9223_0555 integral membrane protein 72793 74172 -1
CDS - ZP_07906515.1 HMPREF9223_0556 ABC superfamily ATP binding cassette transporter, membrane protein 74295 74996 -1
CDS - ZP_07906516.1 HMPREF9223_0557 ABC superfamily ATP binding cassette transporter, binding protein 74989 76038 -1
CDS - ZP_07906517.1 HMPREF9223_0558 ABC superfamily ATP binding cassette transporter, ABC protein 76419 78041 -1
CDS pulA ZP_07906518.1 HMPREF9223_0559 pullulanase 78059 79930 -1
CDS eno ZP_07906519.1 HMPREF9223_0560 enolase 80066 81352 -1
CDS - ZP_07906520.1 HMPREF9223_0561 membrane-associated phosphatase 81497 82072 -1
tRNA - - HMPREF9223_t0016 tRNA-Ser 82146 82232 -1
CDS - ZP_07906521.1 HMPREF9223_0562 cation-transporting ATPase 82355 84613 1
CDS pulA2 ZP_07906522.1 HMPREF9223_0563 pullulanase 84619 86607 -1
CDS - ZP_07906523.1 HMPREF9223_0564 ABC superfamily ATP binding cassette transporter, membrane protein 86674 88182 -1
CDS - ZP_07906524.1 HMPREF9223_0565 ABC superfamily ATP binding cassette transporter, ABC protein 88175 89128 -1
CDS - ZP_07906525.1 HMPREF9223_0566 major facilitator superfamily transporter permease 89169 90344 -1
CDS glnA ZP_07906526.1 HMPREF9223_0567 glutamate-ammonia ligase 90447 91784 -1
CDS miaA ZP_07906527.1 HMPREF9223_0568 tRNA delta(2)-isopentenylpyrophosphate transferase 91889 92830 -1
CDS - ZP_07906528.1 HMPREF9223_0569 conserved hypothetical protein 92899 93078 1
CDS - ZP_07906529.1 HMPREF9223_0570 rhodanese family protein 93133 93534 -1
CDS - ZP_07906530.1 HMPREF9223_0571 conserved hypothetical protein 93568 93786 -1
CDS - ZP_07906531.1 HMPREF9223_0572 membrane-associated serine protease 93786 94484 -1
CDS fthC ZP_07906532.1 HMPREF9223_0573 5-formyltetrahydrofolate cyclo-ligase 94498 95049 -1
CDS rpmG ZP_07906533.1 HMPREF9223_0574 50S ribosomal protein L33 95106 95255 -1
tRNA - - HMPREF9223_t0017 tRNA-Arg 95430 95503 -1
CDS pepN ZP_07906534.1 HMPREF9223_0575 aminopeptidase N 95581 98121 -1
CDS pepX ZP_07906535.1 HMPREF9223_0576 xaa-Pro dipeptidyl-peptidase 98272 100656 1
CDS rpoN ZP_07906536.1 HMPREF9223_0577 DNA-directed RNA polymerase sigma subunit RpoN 100730 102010 -1
CDS - ZP_07906537.1 HMPREF9223_0578 MgtC family magnesium (Mg2+) transporter 102024 102728 -1
CDS - ZP_07906538.1 HMPREF9223_0579 PTS family porter component II 102729 103556 -1
CDS ptsC ZP_07906539.1 HMPREF9223_0580 PTS system, mannose/fructose family IIC component 103553 104377 -1
CDS ulaB ZP_07906540.1 HMPREF9223_0581 PTS family ascorbate porter, IIB component 104394 104885 -1
CDS - ZP_07906541.1 HMPREF9223_0582 PTS family fructose/mannitol (fru) porter component IIA 104903 105310 -1
CDS - ZP_07906542.1 HMPREF9223_0583 transcriptional antiterminator 105443 108025 -1
CDS pbpB ZP_07906543.1 HMPREF9223_0584 penicillin-binding protein 2B 108032 110134 -1
CDS greA ZP_07906544.1 HMPREF9223_0585 transcription elongation factor GreA 110189 110713 -1
CDS pabC ZP_07906545.1 HMPREF9223_0586 aminodeoxychorismate lyase 110747 111847 -1
CDS pheT2 ZP_07906546.1 HMPREF9223_0587 phenylalanyl-tRNA synthetase beta subunit 111871 114285 -1