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Lactobacillus iners ATCC 55195 contig00013, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_07906694.1 HMPREF9223_0735 conserved hypothetical protein 1 2645 -1
CDS - ZP_07906695.1 HMPREF9223_0736 hypothetical protein 3242 3664 -1
CDS - ZP_07906696.1 HMPREF9223_0737 XRE family transcriptional regulator 3669 3890 -1
CDS - ZP_07906697.1 HMPREF9223_0738 conserved hypothetical protein 4058 10009 -1
CDS - ZP_07906698.1 HMPREF9223_0739 conserved hypothetical protein 10202 11266 -1
CDS - ZP_07906699.1 HMPREF9223_0740 hypothetical protein 11481 12083 -1
CDS - ZP_07906700.1 HMPREF9223_0741 conserved hypothetical protein 12506 12631 -1
CDS abiGII ZP_07906701.1 HMPREF9223_0742 abortive infection protein AbiGII 12695 13537 -1
CDS - ZP_07906702.1 HMPREF9223_0743 transcriptional regulator 13534 14121 -1
CDS cobC ZP_07906703.1 HMPREF9223_0744 alpha-ribazole-5-phosphate phosphatase 14463 14999 -1
CDS - ZP_07906704.1 HMPREF9223_0745 GNAT family acetyltransferase 15117 15623 -1
CDS - ZP_07906705.1 HMPREF9223_0746 hypothetical protein 15780 16460 -1
CDS - ZP_07906706.1 HMPREF9223_0747 conserved hypothetical protein 16444 16779 -1
CDS - ZP_07906707.1 HMPREF9223_0748 conserved hypothetical protein 16779 17153 -1
CDS - ZP_07906708.1 HMPREF9223_0749 conserved hypothetical protein 17153 17527 -1
CDS - ZP_07906709.1 HMPREF9223_0750 conserved hypothetical protein 17527 17901 -1
CDS - ZP_07906710.1 HMPREF9223_0751 transposase 17901 18386 -1
CDS - ZP_07906711.1 HMPREF9223_0752 conserved hypothetical protein 18615 19208 -1
CDS - ZP_07906712.1 HMPREF9223_0753 XRE family transcriptional regulator 19201 19560 -1
CDS - ZP_07906713.1 HMPREF9223_0754 3-methylcrotonyl-CoA carboxylase 19791 21104 -1
CDS - ZP_07906714.1 HMPREF9223_0755 conserved hypothetical protein 21409 21708 1
CDS - ZP_07906715.1 HMPREF9223_0756 hypothetical protein 21803 22477 -1
CDS - ZP_07906716.1 HMPREF9223_0757 hypothetical protein 22490 22846 -1
CDS - ZP_07906717.1 HMPREF9223_0758 conserved hypothetical protein 23732 23974 -1
CDS - ZP_07906718.1 HMPREF9223_0759 conserved hypothetical protein 24037 24417 -1
CDS - ZP_07906719.1 HMPREF9223_0760 conserved hypothetical protein 24442 24774 -1
CDS - ZP_07906720.1 HMPREF9223_0761 conserved hypothetical protein 25278 25598 -1
CDS - ZP_07906721.1 HMPREF9223_0762 ABC superfamily ATP binding cassette transporter, ABC protein 25682 27268 -1
CDS dinJ ZP_07906722.1 HMPREF9223_0763 DNA-damage-inducible protein J 27336 27506 -1
CDS - ZP_07906723.1 HMPREF9223_0764 conserved hypothetical protein 28021 28326 1
CDS - ZP_07906724.1 HMPREF9223_0765 conserved hypothetical protein 28323 28649 1
CDS - ZP_07906725.1 HMPREF9223_0766 XRE family transcriptional regulator 28916 29548 -1
CDS - ZP_07906726.1 HMPREF9223_0767 conserved hypothetical protein 29978 30154 -1
CDS - ZP_07906727.1 HMPREF9223_0768 conserved hypothetical protein 30129 30314 -1
CDS - ZP_07906728.1 HMPREF9223_0769 putative cadmium binding protein 30638 31249 -1
CDS - ZP_07906729.1 HMPREF9223_0770 conserved hypothetical protein 32278 32748 -1
CDS - ZP_07906730.1 HMPREF9223_0771 conserved hypothetical protein 32947 33918 -1
CDS - ZP_07906731.1 HMPREF9223_0772 hypothetical protein 34935 35399 1
CDS - ZP_07906732.1 HMPREF9223_0773 cro/CI family transcriptional regulator 35402 35605 1
CDS - ZP_07906733.1 HMPREF9223_0774 conserved hypothetical protein 35953 36117 -1
CDS - ZP_07906734.1 HMPREF9223_0775 conserved hypothetical protein 36180 36755 -1
CDS - ZP_07906735.1 HMPREF9223_0776 cytidine/deoxycytidylate deaminase 36921 37355 -1
CDS - ZP_07906736.1 HMPREF9223_0777 NUDIX family hydrolase 37553 38083 -1
CDS - ZP_07906737.1 HMPREF9223_0778 MccC family protein 38272 39300 -1
CDS - ZP_07906738.1 HMPREF9223_0779 ATPase 39555 39713 -1
CDS - ZP_07906739.1 HMPREF9223_0780 conserved hypothetical protein 40318 41406 -1
CDS - ZP_07906740.1 HMPREF9223_0781 GNAT family acetyltransferase 42367 42684 -1
CDS rumA2 ZP_07906741.1 HMPREF9223_0782 23S rRNA (uracil-5-)-methyltransferase 42856 44199 -1
CDS nhaC ZP_07906742.1 HMPREF9223_0783 NhaC family sodium:proton (Na+:H) antiporter 44555 45934 1
CDS - ZP_07906743.1 HMPREF9223_0784 integral membrane protein, interacts with FtsH 46009 46722 1
CDS - ZP_07906744.1 HMPREF9223_0785 ErfK family cell surface protein 46766 47440 -1
CDS - ZP_07906745.1 HMPREF9223_0786 diacylglycerol kinase catalytic domain protein 47526 48434 -1
CDS gatB ZP_07906746.1 HMPREF9223_0787 glutamyl-tRNA(Gln) amidotransferase subunit B 48454 49884 -1
CDS gatA ZP_07906747.1 HMPREF9223_0788 glutamyl-tRNA(Gln) amidotransferase subunit A 49888 51327 -1
CDS gatC ZP_07906748.1 HMPREF9223_0789 glutamyl-tRNA(Gln) amidotransferase subunit C 51327 51629 -1
CDS - ZP_07906749.1 HMPREF9223_0790 lipoprotein 51640 52770 -1
CDS ligA ZP_07906750.1 HMPREF9223_0791 NAD-dependent DNA ligase LigA 52776 54794 -1
CDS pcrA ZP_07906751.1 HMPREF9223_0792 ATP-dependent DNA helicase PcrA 54808 57042 -1
CDS amiD ZP_07906752.1 HMPREF9223_0793 N-acetylmuramoyl-L-alanine amidase 57138 57749 -1
CDS - ZP_07906753.1 HMPREF9223_0794 integral membrane protein 57752 58363 -1
tRNA - - HMPREF9223_t0022 tRNA-Leu 58421 58506 -1
CDS guaB ZP_07906754.1 HMPREF9223_0795 inosine-5'-monophosphate dehydrogenase 58578 59720 -1
CDS pacL ZP_07906755.1 HMPREF9223_0796 P-type cation-transporting ATPase 59868 62531 -1
CDS nadE ZP_07906756.1 HMPREF9223_0797 NH(3)-dependent NAD(+) synthetase 62688 63551 -1
CDS - ZP_07906757.1 HMPREF9223_0798 nicotinate phosphoribosyltransferase 63554 65032 -1
CDS - ZP_07906758.1 HMPREF9223_0799 glycosyltransferase 65083 65781 -1
CDS - ZP_07906759.1 HMPREF9223_0800 glycosyltransferase group 1 protein 65844 66932 -1
CDS tarA ZP_07906760.1 HMPREF9223_0801 mannosaminyltransferase 66968 67693 -1
CDS epsU ZP_07906761.1 HMPREF9223_0802 capsular polysaccharide synthesis protein 67697 69124 -1
CDS rodC ZP_07906762.1 HMPREF9223_0803 teichoic acid biosynthesis protein 69139 70272 -1
CDS tagD ZP_07906763.1 HMPREF9223_0804 glycerol-3-phosphate cytidylyltransferase 70410 70799 1
CDS - ZP_07906764.1 HMPREF9223_0805 major facilitator superfamily transporter permease 71028 72281 1
CDS gntR3 ZP_07906765.1 HMPREF9223_0806 GntR family transcriptional regulator 72381 73082 -1
tRNA - - HMPREF9223_t0023 tRNA-Gln 73214 73285 -1
tRNA - - HMPREF9223_t0024 tRNA-Tyr 73293 73374 -1
CDS ldh ZP_07906766.1 HMPREF9223_0807 L-lactate dehydrogenase 73486 74394 -1
tRNA - - HMPREF9223_t0025 tRNA-Gln 74505 74579 -1
CDS mvaS ZP_07906767.1 HMPREF9223_0808 hydroxymethylglutaryl-CoA synthase 74636 75799 -1
CDS mvaA ZP_07906768.1 HMPREF9223_0809 hydroxymethylglutaryl-CoA reductase 75799 77019 -1
CDS atoB ZP_07906769.1 HMPREF9223_0810 acetyl-CoA acetyltransferase 77004 78170 -1
CDS lysM ZP_07906770.1 HMPREF9223_0811 LysM domain protein 78408 78968 1
CDS - ZP_07906771.1 HMPREF9223_0812 conserved hypothetical protein 79041 79325 -1
CDS brnQ ZP_07906772.1 HMPREF9223_0813 LIVCS family branched chain amino acid:cation symporter 79606 80979 -1
CDS - ZP_07906773.1 HMPREF9223_0814 M20/M25/M40 family peptidase 81369 82589 -1
CDS metQ ZP_07906774.1 HMPREF9223_0815 D-methionine ABC superfamily ATP binding cassette transporter, binding protein 82634 83473 -1
CDS - ZP_07906775.1 HMPREF9223_0816 conserved hypothetical protein 83867 85942 -1
CDS - ZP_07906776.1 HMPREF9223_0817 ABC superfamily ATP binding cassette transporter, membrane protein 86242 87039 -1
CDS - ZP_07906777.1 HMPREF9223_0818 metal cation ABC superfamily ATP binding cassette transporter, ABC protein 87036 87707 -1
CDS adcA ZP_07906778.1 HMPREF9223_0819 metal cation ABC superfamily ATP binding cassette transporter, binding protein 87700 88611 -1
CDS - ZP_07906779.1 HMPREF9223_0820 integral membrane protein 88775 89296 -1
CDS smpB ZP_07906780.1 HMPREF9223_0821 SsrA-binding protein 89406 89864 -1
CDS rnr ZP_07906781.1 HMPREF9223_0822 ribonuclease R 89867 92143 -1
CDS secG ZP_07906782.1 HMPREF9223_0823 preprotein translocase subunit SecG 92214 92447 -1
CDS eno2 ZP_07906783.1 HMPREF9223_0824 enolase 92566 93864 -1
CDS tpiA ZP_07906784.1 HMPREF9223_0825 triose-phosphate isomerase 93915 94670 -1
CDS pgk ZP_07906785.1 HMPREF9223_0826 phosphoglycerate kinase 94688 95902 -1
CDS gap ZP_07906786.1 HMPREF9223_0827 glyceraldehyde-3-phosphate dehydrogenase 96011 97027 -1
CDS cggR ZP_07906787.1 HMPREF9223_0828 central glycolytic gene regulator 97084 98151 -1
CDS clpP ZP_07906788.1 HMPREF9223_0829 ATP-dependent Clp protease proteolytic subunit 98628 99212 1
CDS - ZP_07906789.1 HMPREF9223_0830 ATPase 99321 100577 -1