xBASE Logo
About | Contact | Home

Lactobacillus iners DSM 13335, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS fnbA ZP_05744390.1 HMPREF0520_0998 fibronectin-binding protein A 1 280 1
CDS comGA ZP_05744391.1 HMPREF0520_0999 competence protein ComGA 404 1378 1
CDS - ZP_05744392.1 HMPREF0520_1000 competence protein 1350 2345 1
CDS - ZP_05744393.1 HMPREF0520_1001 conserved hypothetical protein 2360 2686 1
CDS - ZP_05744394.1 HMPREF0520_1002 conserved hypothetical protein 2670 3101 1
CDS - ZP_05744395.1 HMPREF0520_1003 hypothetical protein 3091 3309 1
CDS - ZP_05744396.1 HMPREF0520_1004 conserved hypothetical protein 3296 3787 1
CDS - ZP_05744397.1 HMPREF0520_1005 conserved hypothetical protein 3771 3944 1
CDS - ZP_05744398.1 HMPREF0520_1006 conserved hypothetical protein 4035 5036 1
CDS ackA2 ZP_05744399.1 HMPREF0520_1007 acetate kinase 5047 6258 1
CDS - ZP_05744400.1 HMPREF0520_1008 hypothetical protein 6674 6796 1
CDS - ZP_05744401.1 HMPREF0520_1009 minor capsid protein 7278 7568 1
CDS - ZP_05744402.1 HMPREF0520_1010 conserved hypothetical protein 7573 7770 1
CDS - ZP_05744403.1 HMPREF0520_1011 arsenate reductase 8094 8402 1
CDS - ZP_05744404.1 HMPREF0520_1012 sensor histidine kinase 8389 8556 1
CDS - ZP_05744405.1 HMPREF0520_1013 conserved hypothetical protein 8730 8888 1
CDS - ZP_05744406.1 HMPREF0520_1014 major facilitator superfamily transporter 9011 9619 1
CDS - ZP_05744407.1 HMPREF0520_1015 ABC superfamily ATP binding cassette transporter, permease protein 9619 10308 1
CDS - ZP_05744408.1 HMPREF0520_1016 ABC superfamily ATP binding cassette transporter, ABC protein 10302 11678 1
CDS dexB ZP_05744409.1 HMPREF0520_1017 glucan 1,6-alpha-glucosidase 11736 13355 1
CDS - ZP_05744410.1 HMPREF0520_1018 conserved hypothetical protein 13394 14611 -1
CDS - ZP_05744411.1 HMPREF0520_1019 ABC superfamily ATP binding cassette transporter, binding protein 15005 16000 1
CDS - ZP_05744412.1 HMPREF0520_1020 ABC superfamily ATP binding cassette transporter, membrane protein 16000 16899 1
CDS - ZP_05744413.1 HMPREF0520_1021 ABC superfamily ATP binding cassette transporter, ABC protein 16892 17653 1
CDS - ZP_05744414.1 HMPREF0520_1022 MFS family major facilitator transporter 17763 19211 1
CDS - ZP_05744415.1 HMPREF0520_1023 ABC superfamily ATP binding cassette transporter, ABC protein 19451 20380 1
CDS - ZP_05744416.1 HMPREF0520_1024 ABC superfamily ATP binding cassette transporter, permease protein 20367 21167 1
CDS pyrP ZP_05744417.1 HMPREF0520_1025 NCS family uracil:cation symporter 21220 22530 -1
CDS - ZP_05744418.1 HMPREF0520_1026 major facilitator family transporter 22729 23928 -1
CDS - ZP_05744419.1 HMPREF0520_1027 M42 family peptidase 24095 25183 1
CDS glnQ ZP_05744420.1 HMPREF0520_1028 glutamine ABC superfamily ATP binding cassette transporter, ABC protein 25312 26097 1
CDS glnH ZP_05744421.1 HMPREF0520_1029 glutamine ABC superfamily ATP binding cassette transporter, binding protein 26094 26927 1
CDS glnM ZP_05744422.1 HMPREF0520_1030 glutamine ABC superfamily ATP binding cassette transporter, permease protein 26924 27562 1
CDS glnP ZP_05744423.1 HMPREF0520_1031 ABC superfamily ATP binding cassette transporter, membrane protein 27572 28231 1
CDS rpmB ZP_05744424.1 HMPREF0520_1032 50S ribosomal protein L28 28413 28628 -1
CDS - ZP_05744425.1 HMPREF0520_1033 alkaline shock protein 28726 29133 1
CDS - ZP_05744426.1 HMPREF0520_1034 DAK2 domain protein 29157 30821 1
CDS recG ZP_05744427.1 HMPREF0520_1035 DNA helicase RecG 30823 32844 1
CDS plsX ZP_05744428.1 HMPREF0520_1036 fatty acid/phospholipid synthesis protein PlsX 32865 33866 1
CDS acpP ZP_05744429.1 HMPREF0520_1037 acyl carrier protein 33917 34159 1
CDS oppD ZP_05744430.1 HMPREF0520_1038 oligopeptide ABC superfamily ATP binding cassette transporter, ABC protein 34289 35311 1
CDS oppF ZP_05744431.1 HMPREF0520_1039 oligopeptide ABC superfamily ATP binding cassette transporter, ABC protein 35321 36289 1
CDS appB ZP_05744432.1 HMPREF0520_1040 oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein 36291 37253 1
CDS oppC ZP_05744433.1 HMPREF0520_1041 oligopeptide ABC superfamily ATP binding cassette transporter, permease protein 37268 38197 1
CDS oppA ZP_05744434.1 HMPREF0520_1042 oligopeptide ABC superfamily ATP binding cassette transporter, binding protein 38652 40403 1
CDS rnc ZP_05744435.1 HMPREF0520_1043 ribonuclease III 40538 41215 1
CDS - ZP_05744436.1 HMPREF0520_1044 conserved hypothetical protein 41238 44795 1
CDS ftsY ZP_05744437.1 HMPREF0520_1045 signal recognition particle-docking protein FtsY 44779 45816 1
CDS pepDA ZP_05744438.1 HMPREF0520_1046 dipeptidase A 45843 47267 1
CDS - ZP_05744439.1 HMPREF0520_1047 cell division initiation protein 47373 48200 1
CDS vva ZP_05744440.1 HMPREF0520_1048 cold shock domain family protein 51200 51418 1
CDS nudF ZP_05744441.1 HMPREF0520_1049 MutT/NUDIX family protein 51424 51987 1
CDS - ZP_05744442.1 HMPREF0520_1050 conserved hypothetical protein 51980 52231 1
CDS mtnN ZP_05744443.1 HMPREF0520_1051 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 52243 52932 1
CDS iscS ZP_05744444.1 HMPREF0520_1052 cysteine desulfurase 52954 54099 1
CDS folB ZP_05744445.1 HMPREF0520_1053 dihydroneopterin aldolase 54241 54576 1
CDS folK ZP_05744446.1 HMPREF0520_1054 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase 54573 55088 1
CDS folE ZP_05744447.1 HMPREF0520_1055 GTP cyclohydrolase I 55069 55629 1
CDS folC ZP_05744448.1 HMPREF0520_1056 tetrahydrofolate synthase 55635 56897 1
CDS - ZP_05744449.1 HMPREF0520_1057 conserved hypothetical protein 56890 57489 1
CDS folP ZP_05744450.1 HMPREF0520_1058 dihydropteroate synthase 57489 58625 1
CDS rplU ZP_05744451.1 HMPREF0520_1059 50S ribosomal protein L21 58684 59103 1
CDS rpmA ZP_05744452.1 HMPREF0520_1060 50S ribosomal protein L27 59120 59419 1
CDS pepQ ZP_05744453.1 HMPREF0520_1061 xaa-Pro dipeptidase 59487 60596 1
CDS efp ZP_05744454.1 HMPREF0520_1062 elongation factor P 60686 61240 1
CDS asp ZP_05744455.1 HMPREF0520_1063 alkaline shock protein 61273 61686 1
CDS nusB ZP_05744456.1 HMPREF0520_1064 conserved hypothetical protein 61686 62087 1
CDS folD ZP_05744457.1 HMPREF0520_1065 conserved hypothetical protein 62088 62993 1
CDS xseA ZP_05744458.1 HMPREF0520_1066 exodeoxyribonuclease VII 62983 64341 1
CDS xseB ZP_05744459.1 HMPREF0520_1067 exodeoxyribonuclease VII 64334 64576 1
CDS ispA ZP_05744460.1 HMPREF0520_1068 geranyltranstransferase 64579 65445 1
CDS tlyA ZP_05744461.1 HMPREF0520_1069 hemolysin A 65445 66257 1
CDS recN ZP_05744462.1 HMPREF0520_1070 DNA repair protein RecN 66270 67949 1
CDS ylxM ZP_05744463.1 HMPREF0520_1071 signal recognition particle associated protein 68045 68395 1
CDS ffh ZP_05744464.1 HMPREF0520_1072 signal recognition particle protein 68397 69824 1
CDS rpsP ZP_05744465.1 HMPREF0520_1073 30S ribosomal protein S16 69915 70187 1
CDS rimM ZP_05744466.1 HMPREF0520_1074 16S rRNA processing protein RimM 70243 70764 1
CDS trmD ZP_05744467.1 HMPREF0520_1075 tRNA (guanine-N(1)-)-methyltransferase 70754 71470 1
CDS argB ZP_05744468.1 HMPREF0520_1076 acetylglutamate kinase 71562 71939 1
CDS - ZP_05744469.1 HMPREF0520_1077 conserved hypothetical protein 72077 72859 1
CDS lexA ZP_05744470.1 HMPREF0520_1078 transcriptional repressor LexA 72904 73488 -1
CDS - ZP_05744471.1 HMPREF0520_1079 conserved hypothetical protein 73612 73857 1
CDS - ZP_05744472.1 HMPREF0520_1080 conserved hypothetical protein 73917 74138 1
CDS - ZP_05744473.1 HMPREF0520_1081 MDR family ABC superfamily ATP binding cassette transporter 74213 75979 1
CDS - ZP_05744474.1 HMPREF0520_1082 MDR family ABC superfamily ATP binding cassette transporter 75960 77765 1
CDS plsC ZP_05744475.1 HMPREF0520_1083 acyltransferase 77814 78446 -1
CDS - ZP_05744476.1 HMPREF0520_1084 methyltransferase 78488 79516 1
CDS rpsB ZP_05744477.1 HMPREF0520_1085 30S ribosomal protein S2 79663 80436 1
CDS tsf ZP_05744478.1 HMPREF0520_1086 elongation factor EF1B 80466 81344 1
CDS pyrH ZP_05744479.1 HMPREF0520_1087 UMP kinase 81500 82225 1
CDS frr ZP_05744480.1 HMPREF0520_1088 ribosome recycling factor 82225 82782 1
CDS uppS ZP_05744481.1 HMPREF0520_1089 di-trans,poly-cis-decaprenylcistransferase 82798 83517 1
CDS cdsA ZP_05744482.1 HMPREF0520_1090 phosphatidate cytidylyltransferase 83535 84332 1
CDS - ZP_05744483.1 HMPREF0520_1091 peptidase 84342 85598 1
CDS proS ZP_05744484.1 HMPREF0520_1092 proline-tRNA ligase 85570 87315 1
CDS - ZP_05744485.1 HMPREF0520_1093 DNA polymerase III 87320 91582 1
CDS - ZP_05744486.1 HMPREF0520_1094 conserved hypothetical protein 91704 92180 1
CDS nusA ZP_05744487.1 HMPREF0520_1095 N utilization substance protein A 92164 93288 1
CDS ylxR ZP_05744488.1 HMPREF0520_1096 cytosolic protein YlxR 93313 93609 1
CDS - ZP_05744489.1 HMPREF0520_1097 ribosomal protein L7A family protein 93599 93916 1