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Lactobacillus iners DSM 13335, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05744513.1 HMPREF0520_1121 hypothetical protein 1 8476 -1
CDS nox ZP_05744514.1 HMPREF0520_1122 NADH oxidase 8720 10066 -1
CDS xpkA ZP_05744515.1 HMPREF0520_1123 xylulose-5-phosphate phosphoketolase 10173 12569 -1
CDS gntR ZP_05744516.1 HMPREF0520_1124 transcriptional regulator 12717 13442 -1
CDS rihA ZP_05744517.1 HMPREF0520_1125 cytidine/uridine-specific hydrolase 13442 14374 -1
CDS rpiA ZP_05744518.1 HMPREF0520_1126 ribose 5-phosphate isomerase 14478 15173 -1
CDS rbsK ZP_05744519.1 HMPREF0520_1127 ribokinase 15160 16098 -1
CDS - ZP_05744520.1 HMPREF0520_1128 ACT domain protein 16252 16518 1
CDS - ZP_05744521.1 HMPREF0520_1129 glycerol-3-phosphate dehydrogenase 16536 17879 1
CDS - ZP_05744522.1 HMPREF0520_1130 conserved hypothetical protein 18029 19087 -1
CDS - ZP_05744523.1 HMPREF0520_1131 conserved hypothetical protein 19320 19505 -1
CDS dps ZP_05744524.1 HMPREF0520_1132 DNA protection during starvation protein 2 19686 20153 -1
CDS sufB ZP_05744525.1 HMPREF0520_1133 FeS assembly protein SufB 20231 21634 -1
CDS nifU ZP_05744526.1 HMPREF0520_1134 NifU domain protein 21636 22085 -1
CDS sufS ZP_05744527.1 HMPREF0520_1135 cysteine desulfurase SufS 22075 23313 -1
CDS sufD ZP_05744528.1 HMPREF0520_1136 FeS assembly protein SufD 23279 24577 -1
CDS sufC ZP_05744529.1 HMPREF0520_1137 SUF system FeS assembly ATPase 24590 25381 -1
CDS - ZP_05744530.1 HMPREF0520_1138 conserved hypothetical protein 25442 26065 -1
CDS - ZP_05744531.1 HMPREF0520_1139 PiT family inorganic phosphate transporter 26075 27127 -1
CDS gluA ZP_05744532.1 HMPREF0520_1140 glutamate ABC superfamily ATP binding cassette transporter, ABC protein 27248 27988 -1
CDS glnP2 ZP_05744533.1 HMPREF0520_1141 glutamine ABC superfamily ATP binding cassette transporter, permease protein 27981 29477 -1
CDS udk ZP_05744534.1 HMPREF0520_1142 uridine kinase 29622 30257 1
CDS - ZP_05744535.1 HMPREF0520_1143 thiamine diphosphokinase 30277 30978 -1
CDS rpe ZP_05744536.1 HMPREF0520_1144 ribulose-phosphate 3-epimerase 30975 31667 -1
CDS rsgA ZP_05744537.1 HMPREF0520_1145 ribosome small subunit-dependent GTPase A 31633 32526 -1
CDS - ZP_05744538.1 HMPREF0520_1146 serine/threonine-protein kinase PrkC 32526 34472 -1
CDS stp ZP_05744539.1 HMPREF0520_1147 serine/threonine protein phosphatase Stp1 34448 35197 -1
CDS sun ZP_05744540.1 HMPREF0520_1148 RNA methyltransferase Sun 35203 36516 -1
CDS fmt ZP_05744541.1 HMPREF0520_1149 methionyl-tRNA formyltransferase 36506 37450 -1
CDS priA ZP_05744542.1 HMPREF0520_1150 DNA replication factor Y 37473 39863 -1
CDS rpoZ ZP_05744543.1 HMPREF0520_1151 DNA-directed RNA polymerase subunit omega 39921 40139 -1
CDS gmk ZP_05744544.1 HMPREF0520_1152 guanylate kinase 40141 40767 -1
CDS - ZP_05744545.1 HMPREF0520_1153 conserved hypothetical protein 40896 41186 -1
CDS - ZP_05744546.1 HMPREF0520_1154 conserved hypothetical protein 41189 41611 -1
CDS fstZ ZP_05744547.1 HMPREF0520_1155 cell division protein FtsZ 41634 42896 -1
CDS fstA ZP_05744548.1 HMPREF0520_1156 cell division protein FtsA 42915 44282 -1
CDS - ZP_05744549.1 HMPREF0520_1157 cell division septal protein 44347 45183 -1
CDS murG ZP_05744550.1 HMPREF0520_1158 conserved hypothetical protein 45212 46324 -1
CDS murD ZP_05744551.1 HMPREF0520_1159 UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase 46327 47709 -1
CDS mraY ZP_05744552.1 HMPREF0520_1160 phospho-N-acetylmuramoyl-pentapeptide- transferase 47723 48694 -1
CDS ftsI ZP_05744553.1 HMPREF0520_1161 penicillin-binding protein 48691 50844 -1
CDS ftsL ZP_05744554.1 HMPREF0520_1162 cell division protein FtsL 50841 51206 -1
CDS mraW ZP_05744555.1 HMPREF0520_1163 S-adenosyl-L-methionine-dependent methyltransferase MraW 51234 52181 -1
CDS - ZP_05744556.1 HMPREF0520_1164 conserved hypothetical protein 52184 52621 -1
CDS - ZP_05744557.1 HMPREF0520_1165 conserved hypothetical protein 52779 53114 -1
CDS mreD ZP_05744558.1 HMPREF0520_1166 rod shape-determining protein MreD 53406 53933 -1
CDS mreC ZP_05744559.1 HMPREF0520_1167 rod shape-determining protein MreC 53933 54781 -1
CDS mreB ZP_05744560.1 HMPREF0520_1168 rod shape-determining protein MreB 54831 55874 -1
CDS radC ZP_05744561.1 HMPREF0520_1169 DNA repair protein RadC 55925 56542 -1
CDS - ZP_05744562.1 HMPREF0520_1170 conserved hypothetical protein 56575 57252 -1
CDS folC2 ZP_05744563.1 HMPREF0520_1171 FolC family protein 57233 58498 -1
CDS valS ZP_05744564.1 HMPREF0520_1172 valine-tRNA ligase 58502 61141 -1
CDS thiI ZP_05744565.1 HMPREF0520_1173 thiamine biosynthesis protein ThiI 61433 62632 -1
CDS iscS2 ZP_05744566.1 HMPREF0520_1174 cysteine desulfurase 62661 63815 -1
CDS ezrA ZP_05744567.1 HMPREF0520_1175 septation ring formation regulator 63916 65643 -1
CDS rpsD ZP_05744568.1 HMPREF0520_1176 30S ribosomal protein S4 65887 66513 1
CDS - ZP_05744569.1 HMPREF0520_1177 AAA family ATPase 66576 67895 1
CDS - ZP_05744570.1 HMPREF0520_1178 universal stress protein 68492 68965 1
CDS ftsW ZP_05744571.1 HMPREF0520_1179 FtsW/RodA/SpoVE family cell division protein 69035 70228 -1
CDS - ZP_05744572.1 HMPREF0520_1180 conserved hypothetical protein 70245 70508 -1
CDS - ZP_05744573.1 HMPREF0520_1181 conserved hypothetical protein 70486 70845 -1
CDS mbl ZP_05744574.1 HMPREF0520_1182 rod shape-determining protein Mbl 70847 71836 -1
CDS - ZP_05744575.1 HMPREF0520_1183 conserved hypothetical protein 71902 72135 -1
CDS atpC ZP_05744576.1 HMPREF0520_1184 ATP synthase F1 72185 72619 -1
CDS atpD ZP_05744577.1 HMPREF0520_1185 ATP synthase F1 sector subunit beta 72631 74100 -1
CDS atpG ZP_05744578.1 HMPREF0520_1186 ATP synthase F1 74097 75050 -1
CDS atpA ZP_05744579.1 HMPREF0520_1187 ATP synthase F1 75068 76579 -1
CDS atpH ZP_05744580.1 HMPREF0520_1188 ATP synthase subunit delta 76569 77138 -1
CDS atpF ZP_05744581.1 HMPREF0520_1189 H+ transporting ATPase/ATP synthase 77138 77638 -1
CDS atpE ZP_05744582.1 HMPREF0520_1190 conserved hypothetical protein 77683 77895 -1
CDS atpB ZP_05744583.1 HMPREF0520_1191 ATP synthase F0 77914 78666 -1
CDS upp ZP_05744584.1 HMPREF0520_1192 uracil phosphoribosyltransferase 78725 79402 -1
CDS - ZP_05744585.1 HMPREF0520_1193 Sua5/YciO/YrdC/YwlC family protein 79452 80468 -1
CDS prmC ZP_05744586.1 HMPREF0520_1194 protein-(glutamine-N5) methyltransferase 80452 81297 -1
CDS prfA ZP_05744587.1 HMPREF0520_1195 peptide chain release factor RF1 81284 82372 -1
CDS tdk ZP_05744588.1 HMPREF0520_1196 thymidine kinase 82405 82998 -1
CDS murE2 ZP_05744589.1 HMPREF0520_1197 Mur ligase 83128 84480 1
CDS - ZP_05744590.1 HMPREF0520_1198 conserved hypothetical protein 84483 85496 -1
tRNA - - HMPREF0520_t0028 tRNA-Glu 85623 85694 1
tRNA - - HMPREF0520_t0029 tRNA-Gln 85699 85771 1
CDS - ZP_05744591.1 HMPREF0520_1199 conserved hypothetical protein 85835 87064 -1
CDS - ZP_05744592.1 HMPREF0520_1200 ABC superfamily ATP binding cassette transporter, ABC protein 87061 87990 -1
CDS pgi ZP_05744593.1 HMPREF0520_1201 glucose-6-phosphate isomerase 88046 89386 -1
CDS - ZP_05744594.1 HMPREF0520_1202 sulfatase domain protein 89608 91788 1
CDS srrA2 ZP_05744595.1 HMPREF0520_1203 DNA-binding response regulator 91904 92617 -1
CDS - ZP_05744596.1 HMPREF0520_1204 conserved hypothetical protein 92619 93008 -1
CDS manA ZP_05744597.1 HMPREF0520_1205 mannose-6-phosphate isomerase 93020 93988 -1
CDS - ZP_05744598.1 HMPREF0520_1206 hypothetical protein 94016 95407 -1
CDS - ZP_05744599.1 HMPREF0520_1207 ABC superfamily ATP binding cassette transporter, permease protein 95539 97506 -1
CDS - ZP_05744600.1 HMPREF0520_1208 ABC superfamily ATP binding cassette transporter, ABC protein 97506 98261 -1
CDS - ZP_05744601.1 HMPREF0520_1209 conserved hypothetical protein 98361 99278 -1
CDS - ZP_05744602.1 HMPREF0520_1210 DNA-binding response regulator 99283 99951 -1
CDS - ZP_05744603.1 HMPREF0520_1211 ABC superfamily ATP binding cassette transporter, binding protein 100051 101358 -1
tRNA - - HMPREF0520_t0030 tRNA-Thr 101541 101613 -1