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Lactobacillus iners LactinV 03V1-b contig00018, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_07700956.1 HMPREF9212_0307 comF family protein 39 722 -1
CDS - ZP_07700941.1 HMPREF9212_0308 putative ComF operon protein 1 700 1989 -1
CDS - ZP_07701014.1 HMPREF9212_0309 hypothetical protein 2031 2168 1
CDS - ZP_07700967.1 HMPREF9212_0310 hypothetical protein 2303 2479 1
CDS - ZP_07700981.1 HMPREF9212_0311 hypothetical protein 2431 2694 1
CDS - ZP_07700939.1 HMPREF9212_0312 glycosyltransferase, group 4 family 2741 3877 -1
CDS - ZP_07700999.1 HMPREF9212_0313 conserved hypothetical protein YmdA/YtgF 3972 5264 -1
CDS - ZP_07700950.1 HMPREF9212_0314 hypothetical protein 5353 5601 -1
CDS recA ZP_07700977.1 HMPREF9212_0315 RecA protein 5685 6722 -1
CDS pgsA ZP_07700987.1 HMPREF9212_0316 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 6845 7423 -1
CDS - ZP_07700963.1 HMPREF9212_0317 hypothetical protein 7426 8475 -1
CDS - ZP_07700984.1 HMPREF9212_0318 peptidase, M16 (pitrilysin) family 8612 9835 -1
CDS - ZP_07701009.1 HMPREF9212_0319 peptidase M16 inactive domain protein 9832 11046 -1
CDS spoIIIE ZP_07701001.1 HMPREF9212_0320 stage III sporulation protein E 11051 13315 -1
CDS - ZP_07700979.1 HMPREF9212_0321 hypothetical protein 13331 13738 -1
CDS - ZP_07700978.1 HMPREF9212_0322 RNA methyltransferase, TrmH family, group 2 13749 14261 -1
CDS - ZP_07700942.1 HMPREF9212_0323 hypothetical protein 14362 15366 -1
CDS - ZP_07700973.1 HMPREF9212_0324 hypothetical protein 15513 15893 -1
CDS - ZP_07700993.1 HMPREF9212_0325 hypothetical protein 16029 17048 1
CDS uppP ZP_07700935.1 HMPREF9212_0326 undecaprenyl-diphosphatase UppP 17057 17890 1
CDS - ZP_07701005.1 HMPREF9212_0327 pseudouridine synthase, RluA family 17930 18838 -1
CDS - ZP_07700954.1 HMPREF9212_0328 NAD(+)/NADH kinase 18825 19634 -1
CDS - ZP_07701008.1 HMPREF9212_0329 RelA/SpoT domain protein 19631 20257 -1
CDS - ZP_07700970.1 HMPREF9212_0330 adenylate cyclase 20335 20949 1
CDS - ZP_07700988.1 HMPREF9212_0332 hypothetical protein 21015 21632 1
CDS - ZP_07700995.1 HMPREF9212_0331 hypothetical protein 21625 21828 -1
CDS - ZP_07700990.1 HMPREF9212_0333 hypothetical protein 21993 22496 -1
CDS - ZP_07700951.1 HMPREF9212_0334 adaptor family protein 22574 23332 -1
CDS spxA ZP_07701002.1 HMPREF9212_0335 regulatory protein spx 23423 23821 -1
CDS - ZP_07700996.1 HMPREF9212_0336 hypothetical protein 24593 25018 1
CDS - ZP_07700947.1 HMPREF9212_0337 hypothetical protein 25055 25915 -1
CDS - ZP_07700980.1 HMPREF9212_0338 Gram-positive signal peptide protein, YSIRK family 26050 26829 -1
CDS - ZP_07700971.1 HMPREF9212_0339 Gram-positive signal peptide protein, YSIRK family 27003 28304 -1
CDS - ZP_07700961.1 HMPREF9212_0340 hypothetical protein 28605 28883 1
CDS - ZP_07700975.1 HMPREF9212_0341 hypothetical protein 28904 29266 1
CDS - ZP_07700966.1 HMPREF9212_0342 glycosyl hydrolase family 25 29509 30609 -1
CDS - ZP_07700952.1 HMPREF9212_0343 hypothetical protein 30621 31301 -1
CDS - ZP_07700949.1 HMPREF9212_0344 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 31282 31926 -1
CDS - ZP_07700994.1 HMPREF9212_0345 hypothetical protein 32119 32385 -1
CDS - ZP_07701000.1 HMPREF9212_0346 hypothetical protein 32422 32634 -1
CDS - ZP_07701017.1 HMPREF9212_0347 hypothetical protein 32832 33266 1
CDS - ZP_07701004.1 HMPREF9212_0348 potassium transporter 33377 35449 1
CDS - ZP_07700937.1 HMPREF9212_0349 amidohydrolase 35563 36747 1
CDS - ZP_07700974.1 HMPREF9212_0350 ABC 3 transport family protein 36777 37598 -1
CDS - ZP_07700965.1 HMPREF9212_0351 ABC transporter, ATP-binding protein 37703 38257 -1
CDS - ZP_07700945.1 HMPREF9212_0352 Cof-like hydrolase 38280 39068 -1
CDS - ZP_07700976.1 HMPREF9212_0353 DNA/pantothenate metabolism flavoprotein 39210 39722 -1
CDS - ZP_07700998.1 HMPREF9212_0354 putative phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 39730 40407 -1
CDS rpoC ZP_07700969.1 HMPREF9212_0355 DNA-directed RNA polymerase, beta' subunit 40530 44195 -1
CDS rpoB ZP_07701006.1 HMPREF9212_0356 DNA-directed RNA polymerase, beta subunit 44214 47885 -1
CDS clpC ZP_07701011.1 HMPREF9212_0357 negative regulator of genetic competence ClpC/MecB 48097 50520 -1
CDS - ZP_07700991.1 HMPREF9212_0358 putative aspartate transaminase 50603 51781 -1
CDS - ZP_07701016.1 HMPREF9212_0359 hypothetical protein 51899 52408 -1
CDS - ZP_07700959.1 HMPREF9212_0360 hypothetical protein 52398 53252 -1
tRNA - - HMPREF9212_0361 tRNA-Pro 53267 53340 -1
tRNA - - HMPREF9212_0362 tRNA-Gly 53379 53450 -1
CDS lysS ZP_07700946.1 HMPREF9212_0363 lysine--tRNA ligase 53504 55015 -1
CDS - ZP_07700983.1 HMPREF9212_0364 TIM-barrel protein, nifR3 family 55033 56028 -1
CDS hflB ZP_07700972.1 HMPREF9212_0365 ATP-dependent metallopeptidase HflB 56108 58153 -1
CDS tilS ZP_07700938.1 HMPREF9212_0366 tRNA(Ile)-lysidine synthetase 58237 59466 -1
CDS - ZP_07700992.1 HMPREF9212_0367 hypothetical protein 59557 59895 -1
CDS - ZP_07700997.1 HMPREF9212_0368 septum formation initiator 59895 60269 -1
CDS - ZP_07700985.1 HMPREF9212_0369 S4 domain protein 60352 60594 -1
CDS mfd ZP_07700982.1 HMPREF9212_0370 transcription-repair coupling factor 60608 63940 -1
CDS pth ZP_07700962.1 HMPREF9212_0371 aminoacyl-tRNA hydrolase 63962 64519 -1
CDS - ZP_07700964.1 HMPREF9212_0372 L-lactate dehydrogenase 64658 65629 1
CDS - ZP_07701015.1 HMPREF9212_0373 CBS domain protein 65769 66452 1
CDS alr ZP_07700943.1 HMPREF9212_0374 alanine racemase 66529 67326 -1
CDS - ZP_07700936.1 HMPREF9212_0375 alanine racemase, N-terminal domain protein 67284 67655 -1
CDS acpS ZP_07701013.1 HMPREF9212_0376 holo-[acyl-carrier-protein] synthase 67659 68015 -1
CDS cshA ZP_07700960.1 HMPREF9212_0377 DEAD-box ATP-dependent RNA helicase CshA 68138 69601 -1
CDS - ZP_07700957.1 HMPREF9212_0378 putative UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 69617 70429 -1
CDS - ZP_07700948.1 HMPREF9212_0379 Mur ligase family, catalytic domain protein 70389 70985 -1
CDS rpmE ZP_07700986.1 HMPREF9212_0380 ribosomal protein L31 71124 71375 -1
CDS - ZP_07700944.1 HMPREF9212_0381 transporter, major facilitator family protein 71634 73016 1
CDS - ZP_07701010.1 HMPREF9212_0382 hypothetical protein 73171 73704 1
CDS - ZP_07700940.1 HMPREF9212_0383 hypothetical protein 73710 73940 1
CDS dcm ZP_07701007.1 HMPREF9212_0384 DNA (cytosine-5-)-methyltransferase 73942 74952 -1
CDS - ZP_07700958.1 HMPREF9212_0385 hypothetical protein 75914 76117 1
CDS - ZP_07700953.1 HMPREF9212_0386 hypothetical protein 76074 76349 1
CDS - ZP_07700968.1 HMPREF9212_0387 copper-exporting ATPase 76700 78796 -1
CDS - ZP_07700989.1 HMPREF9212_0388 copper transport repressor, CopY/TcrY family 78816 79148 -1
CDS - ZP_07701003.1 HMPREF9212_0389 hypothetical protein 79112 79264 -1
CDS - ZP_07701012.1 HMPREF9212_0390 hypothetical protein 80014 80286 -1
CDS - ZP_07700955.1 HMPREF9212_0391 hypothetical protein 80867 81193 -1