• Summary page

Sequences

• contig00038, whole genome shotgun sequence
• contig00037, whole genome shotgun sequence
• contig00078, whole genome shotgun sequence
• contig00026, whole genome shotgun sequence
• contig00010, whole genome shotgun sequence
• contig00031, whole genome shotgun sequence
• contig00023, whole genome shotgun sequence
• contig00021, whole genome shotgun sequence
• contig00049, whole genome shotgun sequence
• contig00066, whole genome shotgun sequence
• contig00032, whole genome shotgun sequence
• contig00068, whole genome shotgun sequence
• contig00075, whole genome shotgun sequence
• contig00025, whole genome shotgun sequence
• contig00014, whole genome shotgun sequence
• contig00036, whole genome shotgun sequence
• contig00040, whole genome shotgun sequence
• contig00015, whole genome shotgun sequence
• contig00057, whole genome shotgun sequence
• contig00084, whole genome shotgun sequence
• contig00034, whole genome shotgun sequence
• contig00059, whole genome shotgun sequence
• contig00044, whole genome shotgun sequence
• contig00080, whole genome shotgun sequence
• contig00070, whole genome shotgun sequence
• contig00046, whole genome shotgun sequence
• contig00016, whole genome shotgun sequence
• contig00020, whole genome shotgun sequence
• contig00062, whole genome shotgun sequence
• contig00074, whole genome shotgun sequence
• contig00067, whole genome shotgun sequence
• contig00086, whole genome shotgun sequence
• contig00050, whole genome shotgun sequence
• contig00024, whole genome shotgun sequence
• contig00076, whole genome shotgun sequence
• contig00064, whole genome shotgun sequence
• contig00104, whole genome shotgun sequence
• contig00002, whole genome shotgun sequence
• contig00022, whole genome shotgun sequence
• contig00001, whole genome shotgun sequence
• contig00035, whole genome shotgun sequence
• contig00030, whole genome shotgun sequence
• contig00033, whole genome shotgun sequence
• contig00045, whole genome shotgun sequence
• contig00019, whole genome shotgun sequence
• contig00073, whole genome shotgun sequence
• contig00058, whole genome shotgun sequence
• contig00029, whole genome shotgun sequence
• contig00063, whole genome shotgun sequence
• contig00027, whole genome shotgun sequence
• contig00047, whole genome shotgun sequence
• contig00051, whole genome shotgun sequence
• contig00028, whole genome shotgun sequence
• contig00018, whole genome shotgun sequence
• contig00009, whole genome shotgun sequence
• contig00004, whole genome shotgun sequence
• contig00041, whole genome shotgun sequence
• contig00013, whole genome shotgun sequence
• contig00060, whole genome shotgun sequence
• contig00054, whole genome shotgun sequence
• contig00012, whole genome shotgun sequence
• contig00043, whole genome shotgun sequence
• contig00005, whole genome shotgun sequence
• contig00039, whole genome shotgun sequence
• contig00042, whole genome shotgun sequence
• contig00048, whole genome shotgun sequence
• contig00007, whole genome shotgun sequence

Taxonomy

cellular organisms
» Bacteria
» Firmicutes
» Bacilli
» Lactobacillales
» Lactobacillaceae
» Lactobacillus
» Lactobacillus iners

Lactobacillus iners LactinV 03V1-b

HMPREF9212_1027 - exonuclease, DNA polymerase III, epsilon subunit family

Analysis Tools

View alignment of region with nucmer

Design primers within region using Primer3Plus

View region in Artemis

Retrieve HMPREF9212_1027 nucleotide sequence in FASTA format

Retrieve HMPREF9212_1027 protein sequence in FASTA format

Retrieve HMPREF9212_1027 nucleotide sequence with 10 50 100 200 400 600 800 1000 2000 bp. flanking sequence
Include translation of coding sequence
Include complementary strand.

Run NCBI BLASTP PSI-BLAST against the Non-redundant protein sequences (nr) SwissProt Protein Data Bank (PDB) database using HMPREF9212_1027 protein sequence
(optional - restrict search to taxonomic group: root cellular organisms Bacteria Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Lactobacillus iners )

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Annotation

Product:

exonuclease, DNA polymerase III, epsilon subunit family

GenBank ID: ZP_07701238.1

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