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Lactobacillus iners LactinV 11V1-d contig00008, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_07697248.1 HMPREF9214_0401 hypothetical protein 33 755 -1
CDS - ZP_07697276.1 HMPREF9214_0402 hypothetical protein 773 943 -1
CDS - ZP_07697208.1 HMPREF9214_0403 hypothetical protein 1050 1460 -1
CDS - ZP_07697272.1 HMPREF9214_0404 transcriptional regulator, GntR family 1453 1827 -1
CDS pepT ZP_07697222.1 HMPREF9214_0405 peptidase T 2145 3389 -1
CDS - ZP_07697331.1 HMPREF9214_0406 dinuclear metal center protein, YbgI family 3409 4206 -1
CDS - ZP_07697190.1 HMPREF9214_0407 hypothetical protein 4285 4875 -1
CDS rpoD ZP_07697283.1 HMPREF9214_0408 RNA polymerase sigma factor RpoD 4936 6084 -1
CDS dnaG ZP_07697385.1 HMPREF9214_0409 DNA primase 6096 7898 -1
CDS - ZP_07697252.1 HMPREF9214_0410 hypothetical protein 7917 8054 -1
CDS - ZP_07697374.1 HMPREF9214_0411 glycine--tRNA ligase, beta subunit 8170 9591 -1
CDS - ZP_07697383.1 HMPREF9214_0412 hypothetical protein 9660 9986 -1
CDS glyQ ZP_07697325.1 HMPREF9214_0413 glycine--tRNA ligase, alpha subunit 9988 10893 -1
CDS recO ZP_07697270.1 HMPREF9214_0414 DNA repair protein RecO 11147 11893 -1
CDS era ZP_07697353.1 HMPREF9214_0415 ribosome biogenesis GTPase Era 11897 12799 -1
CDS ybeY ZP_07697243.1 HMPREF9214_0416 translation metalloprotein YbeY 12815 13342 -1
CDS ybeZ ZP_07697378.1 HMPREF9214_0417 PhoH-like protein 13339 14301 -1
CDS - ZP_07697215.1 HMPREF9214_0418 YqeY-like protein 14321 14764 -1
CDS rpsU ZP_07697249.1 HMPREF9214_0419 ribosomal protein S21 14861 15037 -1
CDS - ZP_07697247.1 HMPREF9214_0420 hypothetical protein 15239 16072 1
CDS - ZP_07697418.1 HMPREF9214_0421 hypothetical protein 16125 17003 -1
CDS - ZP_07697265.1 HMPREF9214_0422 flavin reductase 17129 17701 -1
CDS aspS ZP_07697311.1 HMPREF9214_0423 aspartate--tRNA ligase 17782 19620 -1
CDS hisS ZP_07697341.1 HMPREF9214_0424 histidine--tRNA ligase 19623 20909 -1
CDS dtd ZP_07697207.1 HMPREF9214_0425 D-tyrosyl-tRNA(Tyr) deacylase 21156 21593 -1
CDS relA ZP_07697297.1 HMPREF9214_0426 GTP diphosphokinase 21593 23461 -1
CDS - ZP_07697409.1 HMPREF9214_0427 hypothetical protein 23512 23844 -1
CDS - ZP_07697218.1 HMPREF9214_0428 hypothetical protein 23854 24234 -1
CDS prmA ZP_07697333.1 HMPREF9214_0429 ribosomal protein L11 methyltransferase 24271 25203 -1
CDS - ZP_07697365.1 HMPREF9214_0430 putative YbaK/EbsC protein 25265 25756 1
CDS - ZP_07697261.1 HMPREF9214_0431 hypothetical protein 25827 27206 -1
CDS metI ZP_07697206.1 HMPREF9214_0432 D-methionine transport system permease protein MetI 27329 28030 -1
CDS - ZP_07697277.1 HMPREF9214_0433 ABC transporter, ATP-binding protein 28023 29072 -1
CDS - ZP_07697388.1 HMPREF9214_0435 ABC transporter, ATP-binding protein 29453 31075 -1
CDS pulA_1 ZP_07697281.1 HMPREF9214_0436 pullulanase, type I 31093 32964 -1
CDS eno ZP_07697371.1 HMPREF9214_0437 phosphopyruvate hydratase 33100 34386 -1
CDS - ZP_07697238.1 HMPREF9214_0438 PAP2 family protein 34540 35094 -1
tRNA - - HMPREF9214_0439 tRNA-Ser 35188 35274 -1
CDS - ZP_07697377.1 HMPREF9214_0440 E1-E2 ATPase 35397 37655 1
CDS pulA_2 ZP_07697351.1 HMPREF9214_0441 pullulanase, type I 37661 39598 -1
CDS - ZP_07697391.1 HMPREF9214_0442 ABC transporter, substrate-binding protein, QAT family 39715 41232 -1
CDS - ZP_07697195.1 HMPREF9214_0443 ABC transporter, ATP-binding protein 41225 42178 -1
CDS - ZP_07697357.1 HMPREF9214_0444 transporter, major facilitator family protein 42218 43393 -1
CDS glnA ZP_07697201.1 HMPREF9214_0445 glutamine synthetase, type I 43496 44833 -1
CDS miaA ZP_07697323.1 HMPREF9214_0446 tRNA dimethylallyltransferase 44938 45873 -1
CDS - ZP_07697397.1 HMPREF9214_0447 hypothetical protein 45948 46127 1
CDS - ZP_07697260.1 HMPREF9214_0448 rhodanese-like protein 46182 46583 -1
CDS - ZP_07697315.1 HMPREF9214_0449 hypothetical protein 46618 46836 -1
CDS - ZP_07697194.1 HMPREF9214_0450 peptidase, S54 family 46836 47534 -1
CDS - ZP_07697322.1 HMPREF9214_0451 5-formyltetrahydrofolate cyclo-ligase 47548 48099 -1
CDS rpmG ZP_07697390.1 HMPREF9214_0452 ribosomal protein L33 48156 48305 -1
tRNA - - HMPREF9214_0453 tRNA-Arg 48479 48552 -1
CDS pepN ZP_07697345.1 HMPREF9214_0454 membrane alanyl aminopeptidase 48630 51170 -1
CDS pepX ZP_07697234.1 HMPREF9214_0455 Xaa-Pro dipeptidyl-peptidase 51321 53705 1
CDS rpoN ZP_07697415.1 HMPREF9214_0456 RNA polymerase sigma-54 factor 53779 55059 -1
CDS - ZP_07697287.1 HMPREF9214_0457 Mg2+ transporter-C family protein 55073 55777 -1
CDS - ZP_07697313.1 HMPREF9214_0458 putative mannose permease IID component 55778 56605 -1
CDS - ZP_07697246.1 HMPREF9214_0459 PTS system sorbose-specific iic component 56602 57426 -1
CDS - ZP_07697375.1 HMPREF9214_0460 PTS system sorbose subfamily IIB component 57443 57934 -1
CDS - ZP_07697275.1 HMPREF9214_0461 PTS system fructose IIA component 57952 58359 -1
CDS - ZP_07697328.1 HMPREF9214_0462 Sigma-54 interaction domain protein 58492 61053 -1
CDS - ZP_07697209.1 HMPREF9214_0463 penicillin-binding protein, transpeptidase domain protein 61081 63183 -1
CDS greA ZP_07697227.1 HMPREF9214_0464 transcription elongation factor GreA 63238 63723 -1
CDS - ZP_07697356.1 HMPREF9214_0465 conserved hypothetical protein, YceG family 63796 64797 -1
CDS pheT ZP_07697267.1 HMPREF9214_0466 phenylalanine--tRNA ligase, beta subunit 64919 67333 -1
CDS pheS ZP_07697367.1 HMPREF9214_0467 phenylalanine--tRNA ligase, alpha subunit 67333 68382 -1
CDS - ZP_07697342.1 HMPREF9214_0469 transcriptional regulator, HxlR family 68675 69022 -1
CDS - ZP_07697236.1 HMPREF9214_0470 RNA methyltransferase, TrmH family 69095 69862 -1
CDS - ZP_07697282.1 HMPREF9214_0471 membrane protein insertase, YidC/Oxa1 family 70039 70965 1
CDS - ZP_07697392.1 HMPREF9214_0472 putative signal transduction histidine-protein kinase ArlS 71005 72546 -1
CDS arlR ZP_07697286.1 HMPREF9214_0473 response regulator ArlR 72524 73213 -1
CDS - ZP_07697400.1 HMPREF9214_0474 hypothetical protein 73364 73891 -1
CDS - ZP_07697395.1 HMPREF9214_0475 hypothetical protein 73892 75055 -1
CDS - ZP_07697221.1 HMPREF9214_0476 putative iojap-like protein 75199 75405 -1
CDS - ZP_07697291.1 HMPREF9214_0477 hydrolase, HD family 75417 76025 -1
CDS nadD ZP_07697337.1 HMPREF9214_0478 nicotinate-nucleotide adenylyltransferase 76018 76647 -1
CDS ppdK ZP_07697310.1 HMPREF9214_0479 GTP-binding protein 76647 77171 -1
CDS - ZP_07697405.1 HMPREF9214_0480 GTP-binding family protein 77288 77758 -1
CDS - ZP_07697274.1 HMPREF9214_0481 HAD phosphatase, family IIIA 77763 78275 -1
CDS fruA ZP_07697410.1 HMPREF9214_0482 PTS system fructose-specific EIIABC component 78394 80286 -1
CDS pfkB ZP_07697266.1 HMPREF9214_0483 1-phosphofructokinase 80314 81228 -1
CDS - ZP_07697384.1 HMPREF9214_0484 transcriptional regulator, DeoR family 81242 81979 -1
CDS rplT ZP_07697290.1 HMPREF9214_0485 ribosomal protein L20 82123 82479 -1
CDS rpmI ZP_07697380.1 HMPREF9214_0486 ribosomal protein L35 82516 82716 -1
CDS infC ZP_07697255.1 HMPREF9214_0487 translation initiation factor IF-3 82738 83142 -1
CDS thrS ZP_07697413.1 HMPREF9214_0489 threonine--tRNA ligase 83443 85374 -1
CDS - ZP_07697288.1 HMPREF9214_0490 primosomal protein DnaI 85643 86542 -1
CDS - ZP_07697211.1 HMPREF9214_0491 hypothetical protein 86559 86888 -1
CDS - ZP_07697210.1 HMPREF9214_0492 replication initiation and membrane attachment protein, DnaB/DnaD family 86918 87904 -1
CDS nrdR ZP_07697366.1 HMPREF9214_0493 transcriptional regulator NrdR 87908 88375 -1
CDS coaE ZP_07697355.1 HMPREF9214_0494 dephospho-CoA kinase 88450 88971 -1
CDS mutM ZP_07697193.1 HMPREF9214_0495 DNA-formamidopyrimidine glycosylase 88968 89798 -1
CDS polA ZP_07697312.1 HMPREF9214_0496 DNA-directed DNA polymerase 89811 92462 -1
CDS - ZP_07697389.1 HMPREF9214_0497 hypothetical protein 92513 95497 -1
CDS prfC ZP_07697319.1 HMPREF9214_0498 peptide chain release factor 3 95603 97174 -1
CDS - ZP_07697197.1 HMPREF9214_0499 transporter associated domain protein 97174 97785 -1
CDS - ZP_07697330.1 HMPREF9214_0500 hypothetical protein 97794 98048 -1
CDS - ZP_07697230.1 HMPREF9214_0501 hypothetical protein 98333 98545 -1
CDS - ZP_07697363.1 HMPREF9214_0502 hypothetical protein 98604 99095 -1
CDS recX ZP_07697259.1 HMPREF9214_0503 regulatory protein RecX 99115 99873 -1