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Lactobacillus iners LactinV 11V1-d contig00056, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_07697869.1 HMPREF9214_1314 Gram-positive signal peptide protein, YSIRK family 1 308 -1
CDS - ZP_07697852.1 HMPREF9214_1315 Gram-positive signal peptide protein, YSIRK family 481 1782 -1
CDS - ZP_07697826.1 HMPREF9214_1316 hypothetical protein 2084 2542 1
CDS - ZP_07697867.1 HMPREF9214_1317 glycosyl hydrolase family 25 2989 4089 -1
CDS - ZP_07697809.1 HMPREF9214_1318 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 4101 5405 -1
CDS - ZP_07697837.1 HMPREF9214_1319 hypothetical protein 5598 5864 -1
CDS - ZP_07697881.1 HMPREF9214_1320 hypothetical protein 5900 6112 -1
CDS - ZP_07697845.1 HMPREF9214_1321 hypothetical protein 6311 6745 1
CDS - ZP_07697808.1 HMPREF9214_1322 potassium transporter 6858 8930 1
CDS - ZP_07697838.1 HMPREF9214_1323 amidohydrolase 9044 10228 1
CDS - ZP_07697804.1 HMPREF9214_1324 ABC 3 transport family protein 10287 11078 -1
CDS - ZP_07697887.1 HMPREF9214_1325 ABC transporter, ATP-binding protein 11082 11735 -1
CDS - ZP_07697874.1 HMPREF9214_1326 Cof-like hydrolase 11758 12546 -1
CDS coaBC ZP_07697853.1 HMPREF9214_1327 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 12688 13884 -1
CDS rpoC ZP_07697824.1 HMPREF9214_1328 DNA-directed RNA polymerase, beta' subunit 14007 17672 -1
CDS rpoB ZP_07697873.1 HMPREF9214_1329 DNA-directed RNA polymerase, beta subunit 17691 21365 -1
CDS clpC ZP_07697806.1 HMPREF9214_1330 negative regulator of genetic competence ClpC/MecB 21577 24000 -1
CDS - ZP_07697814.1 HMPREF9214_1331 putative aspartate transaminase 24083 25261 -1
CDS - ZP_07697842.1 HMPREF9214_1332 hypothetical protein 25379 25888 -1
CDS - ZP_07697866.1 HMPREF9214_1333 hypothetical protein 25878 26732 -1
tRNA - - HMPREF9214_1334 tRNA-Pro 26747 26820 -1
tRNA - - HMPREF9214_1335 tRNA-Gly 26859 26930 -1
CDS lysS ZP_07697834.1 HMPREF9214_1336 lysine--tRNA ligase 26984 28495 -1
CDS - ZP_07697832.1 HMPREF9214_1337 TIM-barrel protein, nifR3 family 28513 29508 -1
CDS hflB ZP_07697880.1 HMPREF9214_1338 ATP-dependent metallopeptidase HflB 29588 31633 -1
CDS tilS ZP_07697886.1 HMPREF9214_1339 tRNA(Ile)-lysidine synthetase 31717 32973 -1
CDS - ZP_07697807.1 HMPREF9214_1340 hypothetical protein 33039 33377 -1
CDS - ZP_07697799.1 HMPREF9214_1341 septum formation initiator 33377 33751 -1
CDS - ZP_07697846.1 HMPREF9214_1342 S4 domain protein 33834 34076 -1
CDS mfd ZP_07697847.1 HMPREF9214_1343 transcription-repair coupling factor 34090 37422 -1
CDS pth ZP_07697872.1 HMPREF9214_1344 aminoacyl-tRNA hydrolase 37443 38000 -1
CDS - ZP_07697848.1 HMPREF9214_1345 L-lactate dehydrogenase 38139 39110 1
CDS - ZP_07697802.1 HMPREF9214_1346 CBS domain protein 39250 39933 1
CDS alr ZP_07697843.1 HMPREF9214_1347 alanine racemase 40010 41137 -1
CDS - ZP_07697801.1 HMPREF9214_1348 putative holo-[acyl-carrier-protein] synthase 41141 41452 -1
CDS cshA ZP_07697841.1 HMPREF9214_1349 DEAD-box ATP-dependent RNA helicase CshA 41621 43084 -1
CDS murF ZP_07697827.1 HMPREF9214_1350 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 43100 44467 -1
CDS rpmE ZP_07697831.1 HMPREF9214_1351 ribosomal protein L31 44606 44857 -1
CDS - ZP_07697860.1 HMPREF9214_1352 transporter, major facilitator family protein 45172 46500 1
CDS - ZP_07697825.1 HMPREF9214_1353 hypothetical protein 46650 47420 1
CDS dcm ZP_07697844.1 HMPREF9214_1354 DNA (cytosine-5-)-methyltransferase 47422 48432 -1
CDS - ZP_07697829.1 HMPREF9214_1355 hypothetical protein 49169 49285 -1
CDS - ZP_07697870.1 HMPREF9214_1356 hypothetical protein 49285 49617 -1
CDS - ZP_07697812.1 HMPREF9214_1357 hypothetical protein 49617 50030 -1
CDS - ZP_07697836.1 HMPREF9214_1358 hypothetical protein 50030 50680 -1
CDS - ZP_07697821.1 HMPREF9214_1359 putative toxin-antitoxin system, toxin component 50823 51356 -1
CDS - ZP_07697800.1 HMPREF9214_1360 toxin-antitoxin system, antitoxin component, Xre family 51358 51717 -1
CDS - ZP_07697861.1 HMPREF9214_1361 site-specific recombinase, phage integrase family 52125 52700 -1
CDS - ZP_07697859.1 HMPREF9214_1362 hypothetical protein 52682 53362 -1
CDS - ZP_07697854.1 HMPREF9214_1363 hypothetical protein 53359 53562 -1
CDS - ZP_07697840.1 HMPREF9214_1364 hypothetical protein 53633 54094 -1
CDS - ZP_07697817.1 HMPREF9214_1365 hypothetical protein 54252 54515 -1
CDS - ZP_07697875.1 HMPREF9214_1366 hypothetical protein 54606 55445 -1
CDS - ZP_07697849.1 HMPREF9214_1367 putative lipoprotein 55447 56004 -1
CDS - ZP_07697823.1 HMPREF9214_1368 hypothetical protein 56004 56369 -1
CDS - ZP_07697818.1 HMPREF9214_1369 hypothetical protein 56943 58166 -1
CDS - ZP_07697850.1 HMPREF9214_1370 hypothetical protein 58153 60102 -1
CDS - ZP_07697828.1 HMPREF9214_1371 hypothetical protein 60105 60818 -1
CDS - ZP_07697811.1 HMPREF9214_1372 hypothetical protein 60808 60999 -1
CDS - ZP_07697876.1 HMPREF9214_1373 hypothetical protein 61035 61256 -1
CDS - ZP_07697803.1 HMPREF9214_1374 hypothetical protein 61445 63526 -1
CDS - ZP_07697865.1 HMPREF9214_1375 hypothetical protein 63675 63797 -1
CDS - ZP_07697815.1 HMPREF9214_1376 hypothetical protein 63832 65196 -1
CDS - ZP_07697879.1 HMPREF9214_1377 GMP synthase (glutamine-hydrolyzing), C-terminal domain protein 65369 66922 -1
CDS xpt ZP_07697805.1 HMPREF9214_1379 xanthine phosphoribosyltransferase 67260 67838 1
CDS pbuX ZP_07697862.1 HMPREF9214_1380 xanthine permease 67838 69121 1
CDS rplL ZP_07697797.1 HMPREF9214_1381 ribosomal protein L7/L12 69200 69562 -1
CDS rplJ ZP_07697884.1 HMPREF9214_1382 ribosomal protein L10 69607 70107 -1
CDS rplA ZP_07697855.1 HMPREF9214_1384 ribosomal protein L1 70350 71042 -1
CDS rplK ZP_07697798.1 HMPREF9214_1385 ribosomal protein L11 71139 71564 -1
CDS nusG ZP_07697835.1 HMPREF9214_1386 transcription termination/antitermination factor NusG 71706 72257 -1
CDS secE ZP_07697858.1 HMPREF9214_1387 preprotein translocase, SecE subunit 72335 72502 -1
CDS rpmG ZP_07697813.1 HMPREF9214_1388 ribosomal protein L33 72508 72657 -1
CDS - ZP_07697885.1 HMPREF9214_1389 transporter, major facilitator family protein 72841 74061 1
CDS - ZP_07697883.1 HMPREF9214_1390 RNA polymerase sigma factor, sigma-70 family 74175 74720 -1
CDS - ZP_07697822.1 HMPREF9214_1391 RNA methyltransferase, TrmH family, group 3 74833 75609 -1
CDS - ZP_07697856.1 HMPREF9214_1392 RNase3 domain protein 75590 76033 -1
CDS - ZP_07697878.1 HMPREF9214_1393 DALR domain protein 76020 76352 -1
CDS cysS ZP_07697877.1 HMPREF9214_1394 cysteine--tRNA ligase 76358 77431 -1
CDS gltX ZP_07697819.1 HMPREF9214_1395 glutamate--tRNA ligase 77551 79056 -1
CDS radA ZP_07697868.1 HMPREF9214_1396 DNA repair protein RadA 79130 80509 -1
CDS dut ZP_07697810.1 HMPREF9214_1397 dUTP diphosphatase 80509 81060 -1
CDS pepC ZP_07697820.1 HMPREF9214_1398 aminopeptidase C 81208 82554 1
CDS - ZP_07697816.1 HMPREF9214_1399 hypothetical protein 82595 82966 -1
CDS - ZP_07697839.1 HMPREF9214_1400 hypothetical protein 83002 83529 -1
CDS - ZP_07697871.1 HMPREF9214_1401 phosphoglycerate mutase 1 family 83593 84270 -1
CDS - ZP_07697830.1 HMPREF9214_1402 hypothetical protein 84272 84472 -1
CDS - ZP_07697851.1 HMPREF9214_1403 hypothetical protein 84475 84711 -1
CDS - ZP_07697863.1 HMPREF9214_1404 putative cadmium, cobalt and zinc/H(+)-K(+) antiporter 84736 85623 -1
CDS - ZP_07697864.1 HMPREF9214_1405 phosphoglycerate mutase family protein 85638 86327 -1
CDS - ZP_07697882.1 HMPREF9214_1406 DJ-1 family protein 86471 87049 1
CDS emrE ZP_07697857.1 HMPREF9214_1407 multidrug transporter EmrE 87064 87387 -1
CDS - ZP_07697833.1 HMPREF9214_1408 hypothetical protein 87546 87773 -1