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Lactobacillus iners LactinV 11V1-d contig00007, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_07697926.1 HMPREF9214_0310 hypothetical protein 124 300 -1
CDS - ZP_07697917.1 HMPREF9214_0311 hypothetical protein 419 616 -1
CDS - ZP_07697910.1 HMPREF9214_0312 hypothetical protein 806 1240 -1
CDS - ZP_07697922.1 HMPREF9214_0313 hypothetical protein 1183 1644 -1
CDS - ZP_07697915.1 HMPREF9214_0314 hypothetical protein 1718 1867 -1
CDS - ZP_07697902.1 HMPREF9214_0315 hypothetical protein 2015 2137 -1
CDS - ZP_07697899.1 HMPREF9214_0316 hypothetical protein 2104 2265 -1
CDS - ZP_07697938.1 HMPREF9214_0317 hypothetical protein 2881 3012 -1
CDS - ZP_07697945.1 HMPREF9214_0318 hypothetical protein 3508 4089 -1
CDS - ZP_07697965.1 HMPREF9214_0319 hypothetical protein 4093 4212 -1
CDS - ZP_07697947.1 HMPREF9214_0320 hypothetical protein 4940 5575 -1
CDS - ZP_07697889.1 HMPREF9214_0321 recombinase 5648 5959 -1
CDS - ZP_07697921.1 HMPREF9214_0322 resolvase, N-terminal domain protein 5981 6406 -1
CDS - ZP_07697914.1 HMPREF9214_0323 toxin-antitoxin system, toxin component, Fic family 6969 7811 -1
CDS - ZP_07697895.1 HMPREF9214_0324 divergent AAA domain protein 7826 8413 -1
CDS - ZP_07697924.1 HMPREF9214_0325 hypothetical protein 8494 8610 -1
CDS rumA ZP_07697944.1 HMPREF9214_0326 23S rRNA (uracil-5-)-methyltransferase RumA 8717 10069 -1
CDS nhaC ZP_07697918.1 HMPREF9214_0328 Na+/H+ antiporter NhaC 10425 11804 1
CDS - ZP_07697950.1 HMPREF9214_0329 hypothetical protein 11879 12592 1
CDS - ZP_07697955.1 HMPREF9214_0330 ErfK/YbiS/YcfS/YnhG 12636 13265 -1
CDS - ZP_07697934.1 HMPREF9214_0331 lipid kinase, YegS/Rv2252/BmrU family 13403 14311 -1
CDS gatB ZP_07697963.1 HMPREF9214_0332 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit 14331 15761 -1
CDS gatA ZP_07697907.1 HMPREF9214_0333 aspartyl/glutamyl-tRNA amidotransferase subunit A 15765 17204 -1
CDS gatC ZP_07697896.1 HMPREF9214_0334 glutamyl-tRNA(Gln) amidotransferase, C subunit 17204 17506 -1
CDS - ZP_07697929.1 HMPREF9214_0335 CamS sex pheromone family protein 17517 18647 -1
CDS ligA ZP_07697919.1 HMPREF9214_0336 DNA ligase (NAD+) 18653 20671 -1
CDS pcrA ZP_07697890.1 HMPREF9214_0337 ATP-dependent DNA helicase PcrA 20685 22913 -1
CDS - ZP_07697936.1 HMPREF9214_0338 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 23015 23626 -1
CDS - ZP_07697943.1 HMPREF9214_0339 hypothetical protein 23629 24240 -1
tRNA - - HMPREF9214_0340 tRNA-Leu 24298 24383 -1
CDS guaB ZP_07697930.1 HMPREF9214_0341 inosine-5'-monophosphate dehydrogenase 24455 25597 -1
CDS - ZP_07697928.1 HMPREF9214_0342 putative potassium/sodium efflux P-type ATPase, fungal-type 25745 28408 -1
CDS nadE ZP_07697912.1 HMPREF9214_0343 NAD+ synthase 28566 29429 -1
CDS pncB ZP_07697913.1 HMPREF9214_0344 nicotinate phosphoribosyltransferase 29432 30688 -1
CDS - ZP_07697964.1 HMPREF9214_0345 nicotinate phosphoribosyltransferase domain protein 30676 30909 -1
CDS - ZP_07697893.1 HMPREF9214_0346 hypothetical protein 30960 31658 -1
CDS - ZP_07697888.1 HMPREF9214_0347 glycosyltransferase, group 1 family protein 31721 32422 -1
CDS - ZP_07697961.1 HMPREF9214_0348 hypothetical protein 32491 32808 -1
CDS - ZP_07697908.1 HMPREF9214_0349 glycosyltransferase, WecB/TagA/CpsF family 32844 33500 -1
CDS - ZP_07697905.1 HMPREF9214_0350 polysaccharide biosynthesis protein 33574 35001 -1
CDS - ZP_07697897.1 HMPREF9214_0351 CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase 35016 36149 -1
CDS tagD ZP_07697932.1 HMPREF9214_0352 glycerol-3-phosphate cytidylyltransferase 36287 36676 1
CDS - ZP_07697894.1 HMPREF9214_0353 transporter, major facilitator family protein 36906 38159 1
CDS - ZP_07697956.1 HMPREF9214_0354 UbiC transcription regulator-associated domain protein 38259 38960 -1
tRNA - - HMPREF9214_0355 tRNA-Gln 39092 39163 -1
tRNA - - HMPREF9214_0356 tRNA-Tyr 39171 39252 -1
CDS dhkM ZP_07697891.1 HMPREF9214_0357 L-2-hydroxyisocaproate dehydrogenase 39364 40272 -1
tRNA - - HMPREF9214_0358 tRNA-Gln 40383 40457 -1
CDS - ZP_07697952.1 HMPREF9214_0359 hydroxymethylglutaryl-CoA synthase 40514 41677 -1
CDS - ZP_07697958.1 HMPREF9214_0360 hydroxymethylglutaryl-CoA reductase, degradative 41677 42885 -1
CDS - ZP_07697906.1 HMPREF9214_0361 acetyl-CoA C-acetyltransferase 42882 44048 -1
CDS - ZP_07697903.1 HMPREF9214_0362 hypothetical protein 44286 44846 1
CDS - ZP_07697916.1 HMPREF9214_0363 hypothetical protein 44918 45202 -1
CDS brnQ ZP_07697935.1 HMPREF9214_0364 branched-chain amino acid transport system II carrier protein 45482 46855 -1
CDS - ZP_07697948.1 HMPREF9214_0366 succinyl-diaminopimelate desuccinylase 47246 48400 -1
CDS - ZP_07697960.1 HMPREF9214_0367 NLPA lipoprotein 48510 49349 -1
CDS - ZP_07697904.1 HMPREF9214_0369 hypothetical protein 49743 51818 -1
CDS - ZP_07697937.1 HMPREF9214_0370 ABC 3 transport family protein 52117 52911 -1
CDS - ZP_07697939.1 HMPREF9214_0371 ABC transporter, ATP-binding protein 52911 53582 -1
CDS - ZP_07697925.1 HMPREF9214_0372 ABC transporter, substrate-binding protein 53575 54486 -1
CDS - ZP_07697954.1 HMPREF9214_0373 hypothetical protein 54650 55171 -1
CDS smpB ZP_07697923.1 HMPREF9214_0374 SsrA-binding protein 55281 55739 -1
CDS rnr ZP_07697920.1 HMPREF9214_0375 ribonuclease R 55742 57484 -1
CDS - ZP_07697931.1 HMPREF9214_0376 ribonuclease B OB domain protein 57481 58017 -1
CDS secG ZP_07697927.1 HMPREF9214_0377 preprotein translocase, SecG subunit 58088 58321 -1
CDS eno ZP_07697946.1 HMPREF9214_0378 phosphopyruvate hydratase 58440 59738 -1
CDS tpiA ZP_07697898.1 HMPREF9214_0379 triose-phosphate isomerase 59789 60544 -1
CDS pgk ZP_07697933.1 HMPREF9214_0380 phosphoglycerate kinase 60562 61776 -1
CDS gap ZP_07697966.1 HMPREF9214_0381 glyceraldehyde-3-phosphate dehydrogenase, type I 61885 62901 -1
CDS - ZP_07697901.1 HMPREF9214_0382 putative transcriptional regulator 62958 63989 -1
tRNA - - HMPREF9214_0383 tRNA-OTHER 64217 64288 1
CDS clpP ZP_07697892.1 HMPREF9214_0384 ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 64503 65087 1
CDS - ZP_07697942.1 HMPREF9214_0385 ATPase, AAA family 65196 66452 -1
CDS - ZP_07697911.1 HMPREF9214_0386 hypothetical protein 66468 67961 -1
CDS - ZP_07697949.1 HMPREF9214_0387 hypothetical protein 67954 68898 -1
CDS - ZP_07697968.1 HMPREF9214_0388 hypothetical protein 68898 69932 -1
CDS - ZP_07697900.1 HMPREF9214_0389 hypothetical protein 69945 70370 -1
CDS - ZP_07697962.1 HMPREF9214_0390 hypothetical protein 70438 70821 -1
CDS uvrA ZP_07697953.1 HMPREF9214_0391 excinuclease ABC, A subunit 70873 73689 -1
CDS uvrB ZP_07697909.1 HMPREF9214_0392 excinuclease ABC, B subunit 73717 75591 -1
CDS - ZP_07697951.1 HMPREF9214_0393 phosphoglucomutase family protein 75771 77354 -1
CDS trxB ZP_07697969.1 HMPREF9214_0395 thioredoxin-disulfide reductase 77514 78446 -1
CDS gpsA ZP_07697959.1 HMPREF9214_0396 glycerol-3-phosphate dehydrogenase [NAD(P)+] 78459 79478 -1
CDS lgt ZP_07697957.1 HMPREF9214_0397 prolipoprotein diacylglyceryl transferase 79515 80348 -1
CDS hprK ZP_07697940.1 HMPREF9214_0398 HPr(Ser) kinase/phosphatase 80363 81301 -1
CDS prfB ZP_07697941.1 HMPREF9214_0399 peptide chain release factor 2 81617 82696 -1
CDS - ZP_07697967.1 HMPREF9214_0400 SecA wing/scaffold domain protein 82775 83965 -1