xBASE Logo
About | Contact | Home

Lactobacillus iners LactinV 11V1-d contig00005, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_07698320.1 HMPREF9214_0176 putative DNA polymerase III, alpha subunit, Gram-positive type 148 2172 -1
CDS - ZP_07698297.1 HMPREF9214_0177 PHP domain protein 2133 4421 -1
CDS proS ZP_07698290.1 HMPREF9214_0178 proline--tRNA ligase 4426 6126 -1
CDS rseP ZP_07698372.1 HMPREF9214_0179 RIP metalloprotease RseP 6143 7399 -1
CDS cdsA ZP_07698309.1 HMPREF9214_0180 phosphatidate cytidylyltransferase 7409 8206 -1
CDS - ZP_07698381.1 HMPREF9214_0181 di-trans,poly-cis-decaprenylcistransferase-like protein 8224 8448 -1
CDS - ZP_07698353.1 HMPREF9214_0182 putative di-trans,poly-cis-decaprenylcistransferase 8457 8942 -1
CDS frr ZP_07698302.1 HMPREF9214_0183 ribosome recycling factor 8958 9515 -1
CDS pyrH ZP_07698323.1 HMPREF9214_0184 UMP kinase 9515 10240 -1
CDS tsf ZP_07698384.1 HMPREF9214_0185 translation elongation factor Ts 10396 11271 -1
CDS rpsB ZP_07698367.1 HMPREF9214_0186 ribosomal protein S2 11304 12077 -1
CDS - ZP_07698321.1 HMPREF9214_0187 methyltransferase small domain protein 12399 13253 -1
CDS - ZP_07698318.1 HMPREF9214_0188 Acyltransferase 13313 13927 1
CDS - ZP_07698278.1 HMPREF9214_0189 ABC transporter, ATP-binding protein 13976 15772 -1
CDS - ZP_07698351.1 HMPREF9214_0190 ABC transporter, ATP-binding protein 15762 17528 -1
CDS - ZP_07698396.1 HMPREF9214_0191 hypothetical protein 17603 17818 -1
CDS - ZP_07698325.1 HMPREF9214_0192 hypothetical protein 17883 18128 -1
CDS - ZP_07698392.1 HMPREF9214_0193 LexA DNA binding domain protein 18252 18425 1
CDS - ZP_07698300.1 HMPREF9214_0194 hypothetical protein 18575 18835 1
CDS - ZP_07698364.1 HMPREF9214_0195 hypothetical protein 18880 19275 -1
CDS - ZP_07698344.1 HMPREF9214_0196 putative lipoprotein 19469 19660 -1
CDS rplS ZP_07698311.1 HMPREF9214_0197 ribosomal protein L19 19797 20147 -1
CDS trmD ZP_07698365.1 HMPREF9214_0198 tRNA (guanine-N(1)-)-methyltransferase 20266 20982 -1
CDS rimM ZP_07698354.1 HMPREF9214_0199 16S rRNA processing protein RimM 20972 21493 -1
CDS rpsP ZP_07698359.1 HMPREF9214_0200 ribosomal protein S16 21549 21821 -1
CDS - ZP_07698379.1 HMPREF9214_0201 Signal peptide binding domain protein 21911 22357 -1
CDS ffh ZP_07698355.1 HMPREF9214_0202 signal recognition particle protein 22347 22733 -1
CDS - ZP_07698341.1 HMPREF9214_0203 SRP54-type protein, helical bundle domain protein 22711 23340 -1
CDS - ZP_07698348.1 HMPREF9214_0204 helix-turn-helix protein, YlxM/p13 family 23342 23683 -1
CDS recN ZP_07698324.1 HMPREF9214_0205 DNA repair protein RecN 23788 25467 -1
CDS rrmJ ZP_07698292.1 HMPREF9214_0206 ribosomal RNA large subunit methyltransferase J 25480 26292 -1
CDS - ZP_07698286.1 HMPREF9214_0207 polyprenyl synthetase 26292 27158 -1
CDS xseB ZP_07698305.1 HMPREF9214_0208 exodeoxyribonuclease VII, small subunit 27161 27403 -1
CDS xseA ZP_07698317.1 HMPREF9214_0209 exodeoxyribonuclease VII, large subunit 27416 28753 -1
CDS - ZP_07698345.1 HMPREF9214_0210 tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain protein 28743 29507 -1
CDS nusB ZP_07698363.1 HMPREF9214_0211 transcription antitermination factor NusB 29648 30049 -1
CDS - ZP_07698349.1 HMPREF9214_0212 hypothetical protein 30049 30462 -1
CDS efp ZP_07698377.1 HMPREF9214_0213 translation elongation factor P 30495 31055 -1
CDS - ZP_07698362.1 HMPREF9214_0214 putative Xaa-Pro dipeptidase 31139 31894 -1
CDS - ZP_07698314.1 HMPREF9214_0215 hypothetical protein 31933 32247 -1
CDS rpmA ZP_07698370.1 HMPREF9214_0216 ribosomal protein L27 32315 32611 -1
CDS rplU ZP_07698283.1 HMPREF9214_0217 ribosomal protein L21 32631 32942 -1
CDS - ZP_07698285.1 HMPREF9214_0219 hypothetical protein 33109 33261 -1
CDS - ZP_07698294.1 HMPREF9214_0220 hypothetical protein 33471 33626 -1
CDS - ZP_07698280.1 HMPREF9214_0221 LytTr DNA-binding domain protein 33851 34366 -1
CDS - ZP_07698301.1 HMPREF9214_0222 ABC-2 type transporter 34375 35118 -1
CDS - ZP_07698282.1 HMPREF9214_0223 ABC transporter, ATP-binding protein 35102 35971 -1
CDS - ZP_07698304.1 HMPREF9214_0224 hypothetical protein 35973 36818 -1
CDS - ZP_07698382.1 HMPREF9214_0225 hypothetical protein 37445 37618 -1
CDS - ZP_07698374.1 HMPREF9214_0226 hypothetical protein 37647 37793 -1
CDS folP ZP_07698357.1 HMPREF9214_0227 dihydropteroate synthase 37950 39086 -1
CDS - ZP_07698368.1 HMPREF9214_0228 Ham1 family protein 39086 39685 -1
CDS folC ZP_07698334.1 HMPREF9214_0229 bifunctional protein FolC 39678 40940 -1
CDS folE ZP_07698299.1 HMPREF9214_0230 GTP cyclohydrolase I 40946 41506 -1
CDS folK ZP_07698378.1 HMPREF9214_0231 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase 41487 42002 -1
CDS folB ZP_07698386.1 HMPREF9214_0232 dihydroneopterin aldolase 41999 42292 -1
CDS - ZP_07698350.1 HMPREF9214_0233 aminotransferase, class V 42476 43621 -1
CDS mtnN ZP_07698279.1 HMPREF9214_0234 MTA/SAH nucleosidase 43643 44332 -1
CDS - ZP_07698375.1 HMPREF9214_0235 hypothetical protein 44344 44595 -1
CDS - ZP_07698328.1 HMPREF9214_0236 hydrolase, NUDIX family 44588 45151 -1
CDS cspG ZP_07698316.1 HMPREF9214_0237 cold shock-like protein CspG 45157 45375 -1
CDS ileS ZP_07698333.1 HMPREF9214_0238 isoleucine--tRNA ligase 45375 48161 -1
CDS - ZP_07698296.1 HMPREF9214_0240 putative dipeptidase B 49308 50549 -1
CDS - ZP_07698340.1 HMPREF9214_0241 hypothetical protein 50561 50731 -1
CDS ftsY ZP_07698389.1 HMPREF9214_0242 signal recognition particle-docking protein FtsY 50758 51660 -1
CDS - ZP_07698380.1 HMPREF9214_0243 hypothetical protein 51657 51770 -1
CDS - ZP_07698383.1 HMPREF9214_0244 RecF/RecN/SMC N-terminal domain protein 51778 53091 -1
CDS - ZP_07698326.1 HMPREF9214_0245 RecF/RecN/SMC N-terminal domain protein 53103 55334 -1
CDS rnc ZP_07698293.1 HMPREF9214_0246 ribonuclease III 55357 56034 -1
CDS - ZP_07698373.1 HMPREF9214_0247 ABC transporter, substrate-binding protein, family 5 56169 57920 -1
CDS - ZP_07698387.1 HMPREF9214_0248 ABC transporter, permease protein 58374 59303 -1
CDS - ZP_07698393.1 HMPREF9214_0249 putative oligopeptide ABC transporter, permease protein AppB 59318 60280 -1
CDS appF ZP_07698308.1 HMPREF9214_0250 oligopeptide ABC transporter, ATP-binding protein AppF 60282 61250 -1
CDS oppD ZP_07698329.1 HMPREF9214_0251 oligopeptide transport ATP-binding protein OppD 61260 62264 -1
CDS acpP ZP_07698322.1 HMPREF9214_0252 acyl carrier protein 62412 62654 -1
CDS - ZP_07698310.1 HMPREF9214_0253 putative fatty acid/phospholipid synthesis protein PlsX 62704 63216 -1
CDS plsX ZP_07698313.1 HMPREF9214_0254 fatty acid/phospholipid synthesis protein PlsX 63182 63706 -1
CDS recG ZP_07698376.1 HMPREF9214_0255 ATP-dependent DNA helicase RecG 63727 65748 -1
CDS - ZP_07698303.1 HMPREF9214_0256 DAK2 domain fusion protein YloV 65750 67414 -1
CDS - ZP_07698315.1 HMPREF9214_0257 hypothetical protein 67438 67797 -1
CDS rpmB ZP_07698391.1 HMPREF9214_0258 ribosomal protein L28 67973 68158 1
CDS - ZP_07698336.1 HMPREF9214_0259 putative glutamine ABC transporter, permease protein GlnP 68334 68993 -1
CDS - ZP_07698277.1 HMPREF9214_0260 putative glutamine ABC transporter, permease protein GlnM 69003 69641 -1
CDS glnH ZP_07698360.1 HMPREF9214_0261 ABC transporter glutamine-binding protein GlnH 69638 70459 -1
CDS glnQ ZP_07698331.1 HMPREF9214_0262 glutamine ABC transporter, ATP-binding protein GlnQ 70468 71208 -1
CDS - ZP_07698291.1 HMPREF9214_0263 M42 glutamyl aminopeptidase 71381 72469 -1
CDS - ZP_07698343.1 HMPREF9214_0264 transporter, major facilitator family protein 72636 73835 1
CDS pyrP ZP_07698289.1 HMPREF9214_0266 uracil permease 74033 75346 1
CDS - ZP_07698307.1 HMPREF9214_0267 ABC-2 type transporter 75399 76199 -1
CDS - ZP_07698361.1 HMPREF9214_0268 ABC transporter, ATP-binding protein 76186 77115 -1
CDS - ZP_07698356.1 HMPREF9214_0269 transporter, major facilitator family protein 77357 78805 -1
CDS - ZP_07698395.1 HMPREF9214_0270 ABC transporter, ATP-binding protein 78915 79676 -1
CDS - ZP_07698284.1 HMPREF9214_0271 branched-chain amino acid ABC transporter, permease protein 79669 80568 -1
CDS - ZP_07698394.1 HMPREF9214_0272 ABC transporter substrate binding protein 80568 81563 -1
CDS - ZP_07698338.1 HMPREF9214_0273 bacteriophage peptidoglycan hydrolase 81957 83174 1
CDS dexB ZP_07698346.1 HMPREF9214_0274 glucan 1,6-alpha-glucosidase 83213 84547 -1
CDS - ZP_07698295.1 HMPREF9214_0275 glucan 1,6-alpha-glucosidase domain protein 84538 84831 -1
CDS - ZP_07698388.1 HMPREF9214_0276 ABC transporter, ATP-binding protein 84889 86265 -1
CDS - ZP_07698312.1 HMPREF9214_0277 cobalt transport protein 86259 86948 -1
CDS - ZP_07698366.1 HMPREF9214_0278 conserved hypothetical protein TIGR02185 86964 87557 -1