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Lactobacillus iners LEAF 2053A-b contig00050, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_07734931.1 HMPREF9216_0922 SecA cross-linking domain protein 1 1200 -1
CDS - EFQ48082.1 HMPREF9216_0922 - 1 1200 -1
CDS raiA ZP_07734739.1 HMPREF9216_0923 ribosomal subunit interface protein 1363 1920 -1
CDS raiA EFQ47890.1 HMPREF9216_0923 - 1363 1920 -1
CDS - ZP_07734818.1 HMPREF9216_0924 comF family protein 2001 2684 -1
CDS - EFQ47969.1 HMPREF9216_0924 - 2001 2684 -1
CDS - ZP_07734888.1 HMPREF9216_0925 putative ComF operon protein 1 2662 3951 -1
CDS - EFQ48039.1 HMPREF9216_0925 - 2662 3951 -1
CDS - ZP_07734969.1 HMPREF9216_0926 conserved hypothetical protein, YigZ family 3993 4658 1
CDS - EFQ48120.1 HMPREF9216_0926 - 3993 4658 1
CDS - ZP_07734780.1 HMPREF9216_0927 glycosyltransferase, group 4 family 4704 5840 -1
CDS - EFQ47931.1 HMPREF9216_0927 - 4704 5840 -1
CDS - ZP_07734822.1 HMPREF9216_0928 conserved hypothetical protein YmdA/YtgF 5935 7566 -1
CDS - EFQ47973.1 HMPREF9216_0928 - 5935 7566 -1
CDS recA ZP_07734837.1 HMPREF9216_0929 RecA protein 7650 8687 -1
CDS recA EFQ47988.1 HMPREF9216_0929 - 7650 8687 -1
CDS pgsA ZP_07734926.1 HMPREF9216_0930 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 8810 9388 -1
CDS pgsA EFQ48077.1 HMPREF9216_0930 - 8810 9388 -1
CDS - ZP_07735016.1 HMPREF9216_0931 conserved hypothetical protein 9391 10467 -1
CDS - EFQ48167.1 HMPREF9216_0931 - 9391 10467 -1
CDS - ZP_07734797.1 HMPREF9216_0932 peptidase, M16 family 10576 11799 -1
CDS - EFQ47948.1 HMPREF9216_0932 - 10576 11799 -1
CDS - ZP_07734871.1 HMPREF9216_0933 peptidase M16 inactive domain protein 11796 13010 -1
CDS - EFQ48022.1 HMPREF9216_0933 - 11796 13010 -1
CDS spoIIIE ZP_07734939.1 HMPREF9216_0934 stage III sporulation protein E 13015 15279 -1
CDS spoIIIE EFQ48090.1 HMPREF9216_0934 - 13015 15279 -1
CDS - ZP_07734820.1 HMPREF9216_0935 conserved hypothetical protein 15295 15702 -1
CDS - EFQ47971.1 HMPREF9216_0935 - 15295 15702 -1
CDS - ZP_07735029.1 HMPREF9216_0936 RNA methyltransferase, TrmH family, group 2 15713 16225 -1
CDS - EFQ48180.1 HMPREF9216_0936 - 15713 16225 -1
CDS - ZP_07734936.1 HMPREF9216_0937 putative membrane protein 16326 17468 -1
CDS - EFQ48087.1 HMPREF9216_0937 - 16326 17468 -1
CDS - ZP_07734882.1 HMPREF9216_0938 conserved hypothetical protein 17478 17858 -1
CDS - EFQ48033.1 HMPREF9216_0938 - 17478 17858 -1
CDS - ZP_07734910.1 HMPREF9216_0939 conserved hypothetical protein 17994 19013 1
CDS - EFQ48061.1 HMPREF9216_0939 - 17994 19013 1
CDS uppP ZP_07734963.1 HMPREF9216_0940 undecaprenyl-diphosphatase UppP 19022 19855 1
CDS uppP EFQ48114.1 HMPREF9216_0940 - 19022 19855 1
CDS - ZP_07734769.1 HMPREF9216_0941 pseudouridine synthase, RluA family 19895 20803 -1
CDS - EFQ47920.1 HMPREF9216_0941 - 19895 20803 -1
CDS - ZP_07734829.1 HMPREF9216_0942 NAD(+)/NADH kinase 20790 21596 -1
CDS - EFQ47980.1 HMPREF9216_0942 - 20790 21596 -1
CDS - ZP_07735019.1 HMPREF9216_0943 RelA/SpoT domain protein 21596 22222 -1
CDS - EFQ48170.1 HMPREF9216_0943 - 21596 22222 -1
CDS - ZP_07734750.1 HMPREF9216_0944 adenylate cyclase 22300 22914 1
CDS - EFQ47901.1 HMPREF9216_0944 - 22300 22914 1
CDS - ZP_07734879.1 HMPREF9216_0946 conserved hypothetical protein 22979 23596 1
CDS - EFQ48030.1 HMPREF9216_0946 - 22979 23596 1
CDS - ZP_07734823.1 HMPREF9216_0945 competence protein CoiA-like protein 23589 24458 -1
CDS - EFQ47974.1 HMPREF9216_0945 - 23589 24458 -1
CDS - ZP_07734988.1 HMPREF9216_0947 adaptor family protein 24536 25303 -1
CDS - EFQ48139.1 HMPREF9216_0947 - 24536 25303 -1
CDS spxA ZP_07734804.1 HMPREF9216_0948 regulatory protein spx 25394 25792 -1
CDS spxA EFQ47955.1 HMPREF9216_0948 - 25394 25792 -1
CDS - ZP_07734872.1 HMPREF9216_0949 RNA polymerase sigma factor, sigma-70 family 26009 26503 1
CDS - EFQ48023.1 HMPREF9216_0949 - 26009 26503 1
CDS - ZP_07734912.1 HMPREF9216_0950 conserved hypothetical protein 26565 26990 1
CDS - EFQ48063.1 HMPREF9216_0950 - 26565 26990 1
CDS - ZP_07735020.1 HMPREF9216_0951 hypothetical protein 27027 27887 -1
CDS - EFQ48171.1 HMPREF9216_0951 - 27027 27887 -1
CDS - ZP_07734934.1 HMPREF9216_0952 Gram-positive signal peptide protein, YSIRK family 28021 30120 -1
CDS - EFQ48085.1 HMPREF9216_0952 - 28021 30120 -1
CDS - ZP_07735022.1 HMPREF9216_0953 Gram-positive signal peptide protein, YSIRK family 30299 31600 -1
CDS - EFQ48173.1 HMPREF9216_0953 - 30299 31600 -1
CDS - ZP_07735002.1 HMPREF9216_0954 conserved hypothetical protein 31902 32564 1
CDS - EFQ48153.1 HMPREF9216_0954 - 31902 32564 1
CDS - ZP_07734947.1 HMPREF9216_0955 glycosyl hydrolase family 25 32806 33906 -1
CDS - EFQ48098.1 HMPREF9216_0955 - 32806 33906 -1
CDS - ZP_07734895.1 HMPREF9216_0956 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 33918 35222 -1
CDS - EFQ48046.1 HMPREF9216_0956 - 33918 35222 -1
CDS - ZP_07734971.1 HMPREF9216_0957 conserved hypothetical protein 35415 35681 -1
CDS - EFQ48122.1 HMPREF9216_0957 - 35415 35681 -1
CDS - ZP_07734789.1 HMPREF9216_0958 conserved hypothetical protein 35717 35929 -1
CDS - EFQ47940.1 HMPREF9216_0958 - 35717 35929 -1
CDS - ZP_07734828.1 HMPREF9216_0959 conserved hypothetical protein 36129 36563 1
CDS - EFQ47979.1 HMPREF9216_0959 - 36129 36563 1
CDS - ZP_07734776.1 HMPREF9216_0960 potassium transporter 36676 38748 1
CDS - EFQ47927.1 HMPREF9216_0960 - 36676 38748 1
CDS - ZP_07734923.1 HMPREF9216_0961 amidohydrolase 38862 40046 1
CDS - EFQ48074.1 HMPREF9216_0961 - 38862 40046 1
CDS - ZP_07734958.1 HMPREF9216_0962 ABC 3 transport family protein 40105 40896 -1
CDS - EFQ48109.1 HMPREF9216_0962 - 40105 40896 -1
CDS - ZP_07734915.1 HMPREF9216_0963 ABC transporter, ATP-binding protein 40900 41553 -1
CDS - EFQ48066.1 HMPREF9216_0963 - 40900 41553 -1
CDS - ZP_07734850.1 HMPREF9216_0964 Cof-like hydrolase 41576 42364 -1
CDS - EFQ48001.1 HMPREF9216_0964 - 41576 42364 -1
CDS coaBC ZP_07734830.1 HMPREF9216_0965 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 42506 43702 -1
CDS coaBC EFQ47981.1 HMPREF9216_0965 - 42506 43702 -1
CDS rpoC ZP_07735008.1 HMPREF9216_0966 DNA-directed RNA polymerase, beta' subunit 43825 47490 -1
CDS rpoC EFQ48159.1 HMPREF9216_0966 - 43825 47490 -1
CDS rpoB_1 ZP_07734782.1 HMPREF9216_0967 DNA-directed RNA polymerase, beta subunit 47509 49353 -1
CDS rpoB_1 EFQ47933.1 HMPREF9216_0967 - 47509 49353 -1
CDS rpoB_2 ZP_07734781.1 HMPREF9216_0968 DNA-directed RNA polymerase, beta subunit 49410 51197 -1
CDS rpoB_2 EFQ47932.1 HMPREF9216_0968 - 49410 51197 -1
CDS clpC ZP_07734813.1 HMPREF9216_0969 negative regulator of genetic competence ClpC/MecB 51409 53832 -1
CDS clpC EFQ47964.1 HMPREF9216_0969 - 51409 53832 -1
CDS - ZP_07734913.1 HMPREF9216_0970 putative aspartate transaminase 53915 55093 -1
CDS - EFQ48064.1 HMPREF9216_0970 - 53915 55093 -1
CDS - ZP_07734983.1 HMPREF9216_0971 conserved hypothetical protein 55211 55720 -1
CDS - EFQ48134.1 HMPREF9216_0971 - 55211 55720 -1