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Lactobacillus jensenii JV-V16, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_03955628.1 HMPREF0526_0497 integral membrane protein 1 549 -1
CDS - ZP_03955629.1 HMPREF0526_0498 possible acyl-ACP thioesterase 542 1270 -1
CDS - ZP_03955630.1 HMPREF0526_0499 tetrapyrrole (corrin/porphyrin) methyltransferase 1273 2127 -1
CDS - ZP_03955631.1 HMPREF0526_0500 DNA replication intiation control protein YabA 2111 2476 -1
CDS - ZP_03955632.1 HMPREF0526_0501 DNA polymerase III, delta subunit 2485 3333 -1
CDS - ZP_03955633.1 HMPREF0526_0502 protein of hypothetical function DUF970 3333 3653 -1
CDS tmk ZP_03955634.1 HMPREF0526_0503 dTMP kinase 3653 4300 -1
CDS - ZP_03955635.1 HMPREF0526_0504 conserved hypothetical protein 4391 4630 -1
CDS recR ZP_03955636.1 HMPREF0526_0505 recombination protein RecR 4627 5226 -1
CDS - ZP_03955637.1 HMPREF0526_0506 conserved hypothetical protein 5226 5555 -1
CDS - ZP_03955638.1 HMPREF0526_0507 DNA polymerase III (DNA directed ) gamma-tau 5596 7377 -1
CDS - ZP_03955639.1 HMPREF0526_0508 cytosine/adenosine deaminase 7536 8060 -1
CDS - ZP_03955640.1 HMPREF0526_0509 methyltransferase 8070 8681 -1
CDS - ZP_03955641.1 HMPREF0526_0510 ribosomal protein L7/L12 8765 9127 -1
CDS rplJ ZP_03955642.1 HMPREF0526_0511 50S ribosomal protein L10 9193 9711 -1
CDS - ZP_03955643.1 HMPREF0526_0512 transcriptional regulator/sugar kinase 9893 10813 -1
CDS rfaG ZP_03955644.1 HMPREF0526_0513 glycosyltransferase 10915 11931 -1
CDS rplA ZP_03955645.1 HMPREF0526_0514 50S ribosomal protein L1 12108 12800 -1
CDS rplK ZP_03955646.1 HMPREF0526_0515 50S ribosomal protein L11 12897 13322 -1
CDS nusG ZP_03955647.1 HMPREF0526_0516 transcriptional antiterminator NusG 13453 14010 -1
CDS secE ZP_03955648.1 HMPREF0526_0517 preprotein translocase subunit SecE 14112 14282 -1
CDS - ZP_03955649.1 HMPREF0526_0518 ribosomal protein L33 14285 14434 -1
CDS - ZP_03955650.1 HMPREF0526_0519 conserved hypothetical protein 14582 14800 -1
CDS - ZP_03955651.1 HMPREF0526_0520 DNA-directed RNA polymerase sigma factor 14857 15408 -1
CDS - ZP_03955652.1 HMPREF0526_0521 TrmH family tRNA/rRNA methyltransferase 15512 16267 -1
CDS - ZP_03955653.1 HMPREF0526_0522 ribonuclease III 16254 16697 -1
CDS cysS ZP_03955654.1 HMPREF0526_0523 cys-tRNA synthetase 16690 18111 -1
CDS - ZP_03955655.1 HMPREF0526_0524 hypothetical protein 18206 18511 -1
CDS - ZP_03955656.1 HMPREF0526_0525 hypothetical protein 18632 18946 -1
CDS - ZP_03955657.1 HMPREF0526_0526 hypothetical protein 19097 19525 -1
CDS gltX ZP_03955658.1 HMPREF0526_0527 glutamyl-tRNA synthetase 19658 21175 -1
CDS - ZP_03955659.1 HMPREF0526_0528 DNA repair protein RadA 21232 22608 -1
CDS dut ZP_03955660.1 HMPREF0526_0529 dUTP diphosphatase 22622 23161 -1
CDS - ZP_03955661.1 HMPREF0526_0530 hypothetical protein 23361 23555 1
CDS - ZP_03955662.1 HMPREF0526_0531 bleomycin hydrolase family protein 23622 24971 1
CDS - ZP_03955663.1 HMPREF0526_0532 2',3'-cyclic nucleotide 25020 25955 -1
CDS gpmA2 ZP_03955664.1 HMPREF0526_0533 phosphoglycerate mutase 26041 26718 -1
CDS - ZP_03955665.1 HMPREF0526_0534 hypothetical protein 26729 26905 -1
CDS - ZP_03955666.1 HMPREF0526_0535 CDF family cation diffusion facilitator 26898 27788 -1
CDS - ZP_03955667.1 HMPREF0526_0536 phosphoglycerate mutase 27797 28477 -1
CDS - ZP_03955668.1 HMPREF0526_0537 integral membrane protein 28542 29294 -1
CDS - ZP_03955669.1 HMPREF0526_0538 possible transcriptional regulator 29386 29958 1
CDS - ZP_03955670.1 HMPREF0526_0539 acetyltransferase 30034 30570 1
CDS - ZP_03955671.1 HMPREF0526_0540 major facilitator transporter 30703 31929 1
CDS - ZP_03955672.1 HMPREF0526_0541 ABC superfamily ATP binding cassette transporter 31962 33545 -1
CDS - ZP_03955673.1 HMPREF0526_0542 XRE family transcriptional regulator 33714 34577 -1
CDS rpsI ZP_03955674.1 HMPREF0526_0543 30S ribosomal protein S9 34738 35133 -1
CDS rplM ZP_03955675.1 HMPREF0526_0544 50S ribosomal protein L13 35150 35620 -1
CDS truA ZP_03955676.1 HMPREF0526_0545 tRNA pseudouridine synthase A 35690 36478 -1
CDS - ZP_03955677.1 HMPREF0526_0546 ABC superfamily ATP binding cassette transporter, membrane protein 36478 37275 -1
CDS - ZP_03955678.1 HMPREF0526_0547 metal ion ABC superfamily ATP binding cassette transporter, ABC protein 37268 38131 -1
CDS - ZP_03955679.1 HMPREF0526_0548 ABC superfamily ATP binding cassette transporter, ABC protein 38107 39018 -1
CDS rplQ ZP_03955680.1 HMPREF0526_0549 50S ribosomal protein L17 39128 39511 -1
CDS rpoA ZP_03955681.1 HMPREF0526_0550 DNA-directed RNA polymerase subunit alpha 39539 40480 -1
CDS - ZP_03955682.1 HMPREF0526_0551 ribosomal protein S11 40526 40915 -1
CDS rpsM ZP_03955683.1 HMPREF0526_0552 30S ribosomal protein S13 40945 41295 -1
CDS rpmJ ZP_03955684.1 HMPREF0526_0553 50S ribosomal protein L36 41322 41438 -1
CDS - ZP_03955685.1 HMPREF0526_0554 initiation factor IF1 41453 41674 -1
CDS adk ZP_03955686.1 HMPREF0526_0555 adenylate kinase 41746 42399 -1
CDS secY ZP_03955687.1 HMPREF0526_0556 preprotein translocase subunit SecY 42413 43705 -1
CDS rplO ZP_03955688.1 HMPREF0526_0557 50S ribosomal protein L15 43705 44145 -1
CDS rpmD ZP_03955689.1 HMPREF0526_0558 50S ribosomal protein L30 44168 44353 -1
CDS rpsE ZP_03955690.1 HMPREF0526_0559 30S ribosomal protein S5 44364 44879 -1
CDS rplR ZP_03955691.1 HMPREF0526_0560 50S ribosomal protein L18 44897 45256 -1
CDS - ZP_03955692.1 HMPREF0526_0561 ribosomal protein L6 45279 45809 -1
CDS - ZP_03955693.1 HMPREF0526_0562 ribosomal protein S8 45834 46232 -1
CDS rpsN ZP_03955694.1 HMPREF0526_0563 30S ribosomal protein S14 46256 46441 -1
CDS - ZP_03955695.1 HMPREF0526_0564 ribosomal protein L5 46456 46998 -1
CDS - ZP_03955696.1 HMPREF0526_0565 ribosomal protein L24 47013 47327 -1
CDS - ZP_03955697.1 HMPREF0526_0566 ribosomal protein L14 47349 47717 -1
CDS rpsQ ZP_03955698.1 HMPREF0526_0567 30S ribosomal protein S17 47750 48016 -1
CDS - ZP_03955699.1 HMPREF0526_0568 ribosomal protein L29 48039 48236 -1
CDS rplP ZP_03955700.1 HMPREF0526_0569 50S ribosomal protein L16 48226 48666 -1
CDS - ZP_03955701.1 HMPREF0526_0570 ribosomal protein S3 48666 49340 -1
CDS rplV ZP_03955702.1 HMPREF0526_0571 50S ribosomal protein L22 49354 49707 -1
CDS rpsS ZP_03955703.1 HMPREF0526_0572 30S ribosomal protein S19 49731 50006 -1
CDS rplB ZP_03955704.1 HMPREF0526_0573 50S ribosomal protein L2 50028 50864 -1
CDS - ZP_03955705.1 HMPREF0526_0574 ribosomal protein L23 50880 51176 -1
CDS rplD ZP_03955706.1 HMPREF0526_0575 50S ribosomal protein L4 51176 51793 -1
CDS rplC ZP_03955707.1 HMPREF0526_0576 50S ribosomal protein L3 51808 52437 -1
CDS rpsJ ZP_03955708.1 HMPREF0526_0577 30S ribosomal protein S10 52465 52899 -1
CDS - ZP_03955709.1 HMPREF0526_0578 hypothetical protein 52953 53072 -1
CDS - ZP_03955710.1 HMPREF0526_0579 possible MFS superfamily major facilitator transporter 53080 53553 -1
CDS - ZP_03955711.1 HMPREF0526_0580 MFS superfamily major facilitator transporter 53555 54610 -1
CDS - ZP_03955712.1 HMPREF0526_0581 elongation factor EF2 54760 56850 -1
CDS - ZP_03955713.1 HMPREF0526_0582 ribosomal protein S7 56887 57357 -1
CDS rpsL ZP_03955714.1 HMPREF0526_0583 30S ribosomal protein S12 57372 57779 -1
CDS - ZP_03955715.1 HMPREF0526_0584 possible prepilin peptidase 57962 58183 1
CDS - ZP_03955716.1 HMPREF0526_0585 possible prepilin peptidase 58188 58646 1
CDS rpoC ZP_03955717.1 HMPREF0526_0586 DNA-directed RNA polymerase subunit beta' 58716 62384 -1
CDS rpoB ZP_03955718.1 HMPREF0526_0587 DNA-directed RNA polymerase subunit beta 62396 66034 -1
CDS clpC ZP_03955719.1 HMPREF0526_0588 ATPase 66253 68736 -1
CDS - ZP_03955720.1 HMPREF0526_0589 integral membrane protein 68834 69679 -1
tRNA - - HMPREF0526_t0013 tRNA-Gly 69834 69908 -1
tRNA - - HMPREF0526_t0014 tRNA-Pro 69968 70041 -1
tRNA - - HMPREF0526_t0015 tRNA-Gly 70084 70158 -1
CDS - ZP_03955721.1 HMPREF0526_0590 hypothetical protein 70231 70722 -1
CDS - ZP_03955722.1 HMPREF0526_0591 ABC superfamily ATP binding cassette transporter, ATP-binding protein 70715 71314 -1
CDS - ZP_03955723.1 HMPREF0526_0592 conserved hypothetical protein 71327 71926 -1
CDS - ZP_03955724.1 HMPREF0526_0593 conserved hypothetical protein 71926 72741 -1