xBASE Logo
About | Contact | Home

Lactobacillus jensenii JV-V16, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_03955972.1 HMPREF0526_0841 possible surface protein Rib 1 1035 1
CDS - ZP_03955973.1 HMPREF0526_0842 hypothetical protein 1126 1317 -1
CDS uppP ZP_03955974.1 HMPREF0526_0843 undecaprenyl pyrophosphate phosphatase 1331 2161 -1
CDS - ZP_03955975.1 HMPREF0526_0844 carboxy-cis,cis-muconate cyclase 2172 3209 -1
CDS atp1A1 ZP_03955976.1 HMPREF0526_0845 possible sodium/potassium-exchanging ATPase 3300 6044 1
CDS - ZP_03955977.1 HMPREF0526_0846 permease 6125 7330 1
CDS - ZP_03955978.1 HMPREF0526_0847 SpoU family RNA methyltransferase 7323 7880 1
CDS - ZP_03955979.1 HMPREF0526_0848 conserved hypothetical protein 7873 8064 1
CDS - ZP_03955980.1 HMPREF0526_0849 FtsK/SpoIIIE family DNA translocase 8297 10684 1
CDS - ZP_03955981.1 HMPREF0526_0850 Zn-dependent peptidase 10668 11885 1
CDS - ZP_03955982.1 HMPREF0526_0851 M16C subfamily metallopeptidase 11882 13117 1
CDS - ZP_03955983.1 HMPREF0526_0852 possible 3-oxoacyl-[acyl-carrier-protein] reductase 13128 13856 1
CDS - ZP_03955984.1 HMPREF0526_0853 possible transcription regulation protein 13864 14967 1
CDS pgsA ZP_03955985.1 HMPREF0526_0854 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 14975 15538 1
CDS - ZP_03955986.1 HMPREF0526_0855 recombination protein A 15715 16797 1
CDS ymdA ZP_03955987.1 HMPREF0526_0856 2',3'-cyclic-nucleotide 2'-phosphodiesterase 16921 18552 1
CDS - ZP_03955988.1 HMPREF0526_0857 UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase 18658 19827 1
CDS - ZP_03955989.1 HMPREF0526_0858 protein of hypothetical function UPF0029 19865 20527 -1
CDS - ZP_03955990.1 HMPREF0526_0859 superfamily II DNA/RNA helicase ComFA 20575 21855 1
CDS - ZP_03955991.1 HMPREF0526_0860 competence protein 21852 22529 1
CDS - ZP_03955992.1 HMPREF0526_0861 ribosome-associated inhibitor protein Y 22609 23154 1
CDS - ZP_03955993.1 HMPREF0526_0862 Sec family type I general secretory pathway preprotein translocase subunit SecA 23293 25695 1
CDS - ZP_03955994.1 HMPREF0526_0863 peptide chain release factor RF2 25870 26868 1
CDS - ZP_03955995.1 HMPREF0526_0864 hypothetical protein 26881 27186 1
CDS ptsK ZP_03955996.1 HMPREF0526_0865 HPr kinase/phosphorylase 27198 28139 1
CDS - ZP_03955997.1 HMPREF0526_0866 prolipoprotein diacylglyceryl transferase 28159 28992 1
CDS gpsA ZP_03955998.1 HMPREF0526_0867 glycerol-3-phosphate dehydrogenase (NAD+) 28995 30017 1
CDS trxB ZP_03955999.1 HMPREF0526_0868 thioredoxin reductase 30087 31013 1
CDS pgcA ZP_03956000.1 HMPREF0526_0869 phosphoglucomutase 31139 32863 1
CDS uvrB ZP_03956001.1 HMPREF0526_0870 excinuclease ABC subunit B 32961 35006 1
CDS uvrA ZP_03956002.1 HMPREF0526_0871 excision endonuclease subunit UvrA 34993 37833 1
CDS - ZP_03956003.1 HMPREF0526_0872 ATP-binding protein 37930 38805 1
CDS - ZP_03956004.1 HMPREF0526_0873 protein of hypothetical function UPF0052 38806 39852 1
CDS - ZP_03956005.1 HMPREF0526_0874 protein of hypothetical function DUF199 39845 40783 1
CDS - ZP_03956006.1 HMPREF0526_0875 hypothetical protein 40924 42138 1
CDS ldhD ZP_03956007.1 HMPREF0526_0876 D-lactate dehydrogenase 42204 43196 1
CDS - ZP_03956008.1 HMPREF0526_0877 permease 43344 44537 1
CDS clpP ZP_03956009.1 HMPREF0526_0878 ATP-dependent Clp protease proteolytic subunit 44589 45170 -1
CDS fur ZP_03956010.1 HMPREF0526_0879 ferric uptake regulator 45264 45731 -1
CDS - ZP_03956011.1 HMPREF0526_0880 APC family amino acid-polyamine-organocation transporter 45819 47243 -1
CDS - ZP_03956012.1 HMPREF0526_0881 APC family amino acid-polyamine-organocation transporter 47412 49007 1
CDS - ZP_03956013.1 HMPREF0526_0882 antibiotic biosynthesis monooxygenase 49108 49434 1
tRNA - - HMPREF0526_t0022 tRNA-Arg 49473 49544 -1
CDS - ZP_03956014.1 HMPREF0526_0883 transcriptional regulator 49787 50818 1
CDS gap ZP_03956015.1 HMPREF0526_0884 glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) 50876 51892 1
CDS pgk ZP_03956016.1 HMPREF0526_0885 phosphoglycerate kinase 51998 53209 1
CDS tpiA ZP_03956017.1 HMPREF0526_0886 triosephosphate isomerase 53224 53979 1
CDS eno2 ZP_03956018.1 HMPREF0526_0887 phosphopyruvate hydratase 54039 55337 1
CDS - ZP_03956019.1 HMPREF0526_0888 Sec family type I general secretory protein SecG 55497 55715 1
CDS - ZP_03956020.1 HMPREF0526_0889 exoribonuclease R 55776 58100 1
CDS - ZP_03956021.1 HMPREF0526_0890 SsrA-binding protein 58113 58568 1
CDS - ZP_03956022.1 HMPREF0526_0891 conserved hypothetical protein 58572 59087 -1
CDS - ZP_03956023.1 HMPREF0526_0892 uracil-DNA glycosylase 59180 59869 1
CDS eutD ZP_03956024.1 HMPREF0526_0893 phosphate acetyltransferase 59881 60858 1
CDS - ZP_03956025.1 HMPREF0526_0894 ATP-binding protein 60858 61334 1
CDS - ZP_03956026.1 HMPREF0526_0895 DNA-directed DNA polymerase III 61380 61913 -1
CDS - ZP_03956027.1 HMPREF0526_0896 hypothetical protein 61872 62021 1
CDS murB ZP_03956028.1 HMPREF0526_0897 UDP-N-acetylenolpyruvoylglucosamine reductase 62018 62929 1
CDS - ZP_03956029.1 HMPREF0526_0898 ABC superfamily ATP binding cassette transporter, ABC protein 62926 64026 1
CDS - ZP_03956030.1 HMPREF0526_0899 spermidine-putrescine ABC superfamily ATP binding cassette transporter, permease protein 64010 64828 1
CDS - ZP_03956031.1 HMPREF0526_0900 spermidine/putrescine ABC superfamily ATP binding cassette transporter, membrane protein 64825 65634 1
CDS - ZP_03956032.1 HMPREF0526_0901 spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein 65631 66704 1
CDS - ZP_03956033.1 HMPREF0526_0902 protein of hypothetical function DUF147 66741 67583 1
CDS - ZP_03956034.1 HMPREF0526_0903 YbbR family protein 67580 68548 1
CDS glmM ZP_03956035.1 HMPREF0526_0904 phosphoglucomutase (glycolysis) 68567 69919 1
CDS - ZP_03956036.1 HMPREF0526_0905 HAD superfamily hydrolase 70019 70828 1
CDS - ZP_03956037.1 HMPREF0526_0906 HAD superfamily hydrolase 70837 71670 1
CDS - ZP_03956038.1 HMPREF0526_0907 penicillinase repressor 71718 72191 1
CDS - ZP_03956039.1 HMPREF0526_0908 cupredoxin family domain protein 72206 72574 1
CDS copA ZP_03956040.1 HMPREF0526_0909 copper-transporting ATPase 72574 74481 1
CDS - ZP_03956041.1 HMPREF0526_0910 camphor resistance protein 74585 74968 1
CDS - ZP_03956042.1 HMPREF0526_0911 camphor resistance protein 74965 75300 1
CDS - ZP_03956043.1 HMPREF0526_0912 conserved hypothetical protein 75301 76008 1
CDS acp1 ZP_03956044.1 HMPREF0526_0913 possible protein-tyrosine-phosphatase 76010 76477 1
CDS - ZP_03956045.1 HMPREF0526_0914 protein of hypothetical function DUF28 76524 77252 -1
CDS - ZP_03956046.1 HMPREF0526_0915 VanZ family protein 77329 77850 -1
CDS - ZP_03956047.1 HMPREF0526_0916 ABC superfamily ATP binding cassette transporter, binding protein 77898 78806 1
CDS - ZP_03956048.1 HMPREF0526_0917 APC family amino acid-polyamine-organocation transporter 79027 80640 1
CDS cglA ZP_03956049.1 HMPREF0526_0918 competence protein 80740 81560 1