xBASE Logo
About | Contact | Home

Lactobacillus jensenii JV-V16, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_03956050.1 HMPREF0526_0919 hypothetical protein 1 161 1
CDS - ZP_03956051.1 HMPREF0526_0920 competence protein 127 1128 1
CDS - ZP_03956052.1 HMPREF0526_0921 possible competence protein GC 1136 1468 1
CDS - ZP_03956053.1 HMPREF0526_0922 conserved hypothetical protein 1446 1877 1
CDS - ZP_03956054.1 HMPREF0526_0923 hypothetical protein 1864 2076 1
CDS - ZP_03956055.1 HMPREF0526_0924 conserved hypothetical protein 2066 2557 1
CDS - ZP_03956056.1 HMPREF0526_0925 hypothetical protein 2544 2693 1
CDS - ZP_03956057.1 HMPREF0526_0926 possible DNA methyltransferase 2758 3756 1
CDS ack ZP_03956058.1 HMPREF0526_0927 acetate kinase 3789 4976 1
CDS - ZP_03956059.1 HMPREF0526_0928 hypothetical protein 5685 5873 1
CDS - ZP_03956060.1 HMPREF0526_0929 hypothetical protein 5916 6158 1
CDS - ZP_03956061.1 HMPREF0526_0930 hypothetical protein 6267 6575 1
CDS - ZP_03956062.1 HMPREF0526_0931 hypothetical protein 6804 6941 1
CDS - ZP_03956063.1 HMPREF0526_0932 hypothetical protein 6963 7163 1
CDS - ZP_03956064.1 HMPREF0526_0933 hypothetical protein 7324 7530 1
CDS - ZP_03956065.1 HMPREF0526_0934 hypothetical protein 7574 7867 1
CDS - ZP_03956066.1 HMPREF0526_0935 hypothetical protein 7908 8087 1
CDS - ZP_03956067.1 HMPREF0526_0936 hypothetical protein 8197 8337 1
CDS - ZP_03956068.1 HMPREF0526_0937 hypothetical protein 8359 8490 1
CDS - ZP_03956069.1 HMPREF0526_0938 iron-sulfur ABC superfamily ATP binding cassette transporter, ABC protein 8737 9528 1
CDS sufD ZP_03956070.1 HMPREF0526_0939 iron-sulfur ABC superfamily ATP binding cassette transporter, membrane protein 9540 10769 1
CDS csd ZP_03956071.1 HMPREF0526_0940 cysteine desulfurase 10759 11952 1
CDS iscU ZP_03956072.1 HMPREF0526_0941 iron-sulfur (Fe-S) cluster formation protein IscU 11949 12392 1
CDS sufB ZP_03956073.1 HMPREF0526_0942 ABC superfamily ATP binding cassette transporter-associated protein 12392 13795 1
CDS - ZP_03956074.1 HMPREF0526_0943 integral membrane protein 13895 14470 1
CDS - ZP_03956075.1 HMPREF0526_0944 ribosomal protein L21 14598 14960 1
CDS rpmA ZP_03956076.1 HMPREF0526_0945 50S ribosomal protein L27 14979 15278 1
CDS pepP ZP_03956077.1 HMPREF0526_0946 X-Pro dipeptidase family protein 15344 16450 1
CDS - ZP_03956078.1 HMPREF0526_0947 elongation factor P 16525 17088 1
CDS - ZP_03956079.1 HMPREF0526_0948 alkaline shock protein 17113 17559 1
CDS - ZP_03956080.1 HMPREF0526_0949 transcription termination 17559 17960 1
CDS folD1 ZP_03956081.1 HMPREF0526_0950 methenyltetrahydrofolate cyclohydrolase 18007 18858 1
CDS xseA ZP_03956082.1 HMPREF0526_0951 exodeoxyribonuclease VII (large subunit) EX7L 18845 20206 1
CDS xseB ZP_03956083.1 HMPREF0526_0952 exodeoxyribonuclease VII (small subunit) EX7S 20190 20438 1
CDS - ZP_03956084.1 HMPREF0526_0953 geranyltranstransferase 20440 21306 1
CDS - ZP_03956085.1 HMPREF0526_0954 hemolysin A 21306 22118 1
CDS recN ZP_03956086.1 HMPREF0526_0955 RecN ATPase involved in DNA repair 22132 23817 1
CDS - ZP_03956087.1 HMPREF0526_0956 hypothetical protein 23872 24177 -1
CDS gmk ZP_03956088.1 HMPREF0526_0957 guanylate kinase 24390 25004 1
CDS rpoZ ZP_03956089.1 HMPREF0526_0958 DNA-directed RNA polymerase omega subunit 25008 25226 1
CDS - ZP_03956090.1 HMPREF0526_0959 primosomal replication protein n 25281 27674 1
CDS fmt ZP_03956091.1 HMPREF0526_0960 methionyl-tRNA formyltransferase FMT 27646 28635 1
CDS rmsB ZP_03956092.1 HMPREF0526_0961 rRNA SAM-dependent methyltransferase RmsB 28628 29941 1
CDS ptc7 ZP_03956093.1 HMPREF0526_0962 phosphoprotein phosphatase 29947 30696 1
CDS prkC ZP_03956094.1 HMPREF0526_0963 possible non-specific serine/threonine protein kinase 30693 32687 1
CDS - ZP_03956095.1 HMPREF0526_0964 GTP-binding protein 32684 33571 1
CDS - ZP_03956096.1 HMPREF0526_0965 possible ribulose-phosphate 3-epimerase 33605 33994 1
CDS - ZP_03956097.1 HMPREF0526_0966 possible ribulose-phosphate 3-epimerase 34009 34266 1
CDS thiN ZP_03956098.1 HMPREF0526_0967 possible thiamine diphosphokinase 34253 34927 1
CDS rpmB ZP_03956099.1 HMPREF0526_0968 50S ribosomal protein L28 34998 35183 -1
CDS - ZP_03956100.1 HMPREF0526_0969 alkaline shock protein 35360 35722 1
CDS - ZP_03956101.1 HMPREF0526_0970 glycerone kinase 35743 37398 1
CDS recG ZP_03956102.1 HMPREF0526_0971 ATP-dependent DNA helicase 37403 39427 1
CDS plsX ZP_03956103.1 HMPREF0526_0972 fatty acid/phospholipid synthesis protein PlsX 39436 40440 1
CDS - ZP_03956104.1 HMPREF0526_0973 acyl carrier protein 40498 40737 1
CDS oppD ZP_03956105.1 HMPREF0526_0974 oligopeptide ABC superfamily ATP binding cassette transporter ABC protein 40852 41868 1
CDS oppF ZP_03956106.1 HMPREF0526_0975 oligopeptide ABC superfamily ATP binding cassette transporter ABC protein 41872 42840 1
CDS - ZP_03956107.1 HMPREF0526_0976 oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein 42833 43801 1
CDS - ZP_03956108.1 HMPREF0526_0977 peptide ABC superfamily ATP binding cassette transporter, ABC protein 43816 44730 1
CDS oppA ZP_03956109.1 HMPREF0526_0978 oligopeptide ABC superfamily ATP binding cassette transporter, binding protein 45070 46842 1
CDS - ZP_03956110.1 HMPREF0526_0979 hypothetical protein 47006 47191 1
CDS - ZP_03956111.1 HMPREF0526_0980 peptide ABC superfamily ATP binding cassette transporter, binding protein 47272 48789 1
CDS rnc ZP_03956112.1 HMPREF0526_0981 ribonuclease III 48874 49566 1
CDS smc ZP_03956113.1 HMPREF0526_0982 chromosome segregation protein Smc 49576 53145 1
CDS ftsY ZP_03956114.1 HMPREF0526_0983 signal recognition particle docking protein FtsY 53145 54449 1
CDS - ZP_03956115.1 HMPREF0526_0984 dipeptidase 54442 55884 1
CDS - ZP_03956116.1 HMPREF0526_0985 conserved hypothetical protein 56354 58189 1
CDS - ZP_03956117.1 HMPREF0526_0986 hypothetical protein 58354 58920 1
CDS - ZP_03956118.1 HMPREF0526_0987 XRE family transcriptional regulator 58934 59752 1
CDS - ZP_03956119.1 HMPREF0526_0988 multidrug ABC superfamily ATP binding cassette transporter, ABC and permease component 59715 61343 1
CDS - ZP_03956120.1 HMPREF0526_0989 multidrug ABC superfamily ATP binding cassette transporter, ATPase and permease component 61340 62926 1
CDS - ZP_03956121.1 HMPREF0526_0990 hypothetical protein 63049 63282 1
CDS - ZP_03956122.1 HMPREF0526_0991 transcriptional regulator 63354 63689 1
CDS - ZP_03956123.1 HMPREF0526_0992 Sec family type I general secretory pathway protein signal recognition particle protein 63694 65121 1
CDS - ZP_03956124.1 HMPREF0526_0993 ribosomal protein S16 65211 65483 1
CDS rimM ZP_03956125.1 HMPREF0526_0994 16S rRNA processing protein RimM 65554 66066 1
CDS trmD ZP_03956126.1 HMPREF0526_0995 tRNA (guanine-N(1)-)-methyltransferase 66056 66787 1
CDS rplS ZP_03956127.1 HMPREF0526_0996 50S ribosomal protein L19 66894 67241 1
CDS - ZP_03956128.1 HMPREF0526_0997 possible membrane protein 67395 69374 1
CDS - ZP_03956129.1 HMPREF0526_0998 ABC superfamily ATP binding cassette transporter, ABC protein 69389 70057 1
CDS - ZP_03956130.1 HMPREF0526_0999 conserved hypothetical protein 70054 70386 1
CDS - ZP_03956131.1 HMPREF0526_1000 hypothetical protein 70421 70552 -1
CDS pcp ZP_03956132.1 HMPREF0526_1001 pyrrolidone-carboxylate peptidase 70825 71472 1
CDS scrR ZP_03956133.1 HMPREF0526_1002 LacI family transcriptional regulator 71503 72483 -1
CDS scrB ZP_03956134.1 HMPREF0526_1003 beta-fructofuranosidase 72483 73934 -1
CDS scrA ZP_03956135.1 HMPREF0526_1004 protein-N(pi)-phosphohistidine--sugar phosphotransferase 74174 76120 1
CDS sacP ZP_03956136.1 HMPREF0526_1005 protein-N(pi)-phosphohistidine--sugar phosphotransferase 76406 77818 1
CDS - ZP_03956137.1 HMPREF0526_1006 alpha-galactosidase 77832 80012 1
CDS - ZP_03956138.1 HMPREF0526_1007 PurR family transcriptional regulator 80204 81226 1
CDS lexA ZP_03956139.1 HMPREF0526_1008 repressor lexA 81635 82321 -1
CDS - ZP_03956140.1 HMPREF0526_1009 conserved hypothetical protein 82409 82657 1
CDS - ZP_03956141.1 HMPREF0526_1010 conserved hypothetical protein 82675 82896 1
CDS - ZP_03956142.1 HMPREF0526_1011 transporter ATPase 82912 84738 1
CDS - ZP_03956143.1 HMPREF0526_1012 transporter ATPase 84722 86515 1
CDS - ZP_03956144.1 HMPREF0526_1013 1-acyl-sn-glycerol-3-phosphate acyltransferase 86545 87159 -1
CDS - ZP_03956145.1 HMPREF0526_1014 O-methyltransferase 87223 88233 1
CDS rpsB ZP_03956146.1 HMPREF0526_1015 30S ribosomal protein S2 88403 89185 1
CDS - ZP_03956147.1 HMPREF0526_1016 elongation factor EF1B 89219 90094 1
CDS pyrH ZP_03956148.1 HMPREF0526_1017 uridine mono phosphate kinase 90222 90947 1
CDS - ZP_03956149.1 HMPREF0526_1018 ribosome recycling factor 90947 91504 1