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Lactobacillus jensenii JV-V16, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_03956377.1 HMPREF0526_1246 hypothetical protein 1 146 -1
CDS rfbD ZP_03956378.1 HMPREF0526_1247 dTDP-4-dehydrorhamnose reductase 139 978 -1
CDS rfbB ZP_03956379.1 HMPREF0526_1248 dTDP-glucose 4,6-dehydratase 1036 2067 -1
CDS rfbC ZP_03956380.1 HMPREF0526_1249 dTDP-4-dehydrorhamnose 3,5-epimerase 2079 2660 -1
CDS cpsF ZP_03956381.1 HMPREF0526_1250 rhamnosyltransferase 2661 3893 -1
CDS rfbA ZP_03956382.1 HMPREF0526_1251 glucose-1-phosphate thymidylyltransferase 3916 4794 -1
CDS - ZP_03956383.1 HMPREF0526_1252 hypothetical protein 4797 4991 -1
CDS - ZP_03956384.1 HMPREF0526_1253 oligosaccharide repeat unit polymerase Wzy 4966 5988 -1
CDS - ZP_03956385.1 HMPREF0526_1254 sugar transferase 6005 6658 -1
CDS epsD ZP_03956386.1 HMPREF0526_1255 possible protein-tyrosine-phosphatase 6683 7453 -1
CDS epsC ZP_03956387.1 HMPREF0526_1256 non-specific protein-tyrosine kinase 7456 8232 -1
CDS epsB ZP_03956388.1 HMPREF0526_1257 exopolysaccharide biosynthesis protein 8238 9110 -1
CDS epsA ZP_03956389.1 HMPREF0526_1258 LytR family transcriptional regulator 9125 10162 -1
CDS - ZP_03956390.1 HMPREF0526_1259 conserved hypothetical protein 10464 17771 -1
CDS - ZP_03956391.1 HMPREF0526_1260 possible mucus binding protein precursor Mub 17734 47061 -1
CDS - ZP_03956392.1 HMPREF0526_1261 possible tetratricopeptide repeat family protein 47290 48540 -1
CDS - ZP_03956393.1 HMPREF0526_1262 DNA-binding protein HU 48654 48929 -1
CDS - ZP_03956394.1 HMPREF0526_1263 GTP-binding protein EngA 49148 50467 -1
CDS rpsA ZP_03956395.1 HMPREF0526_1264 30S ribosomal protein S1 50537 51745 -1
CDS cmk ZP_03956396.1 HMPREF0526_1265 cytidylate kinase 51841 52506 -1
CDS - ZP_03956397.1 HMPREF0526_1266 LysM domain protein 52552 53052 -1
CDS - ZP_03956398.1 HMPREF0526_1267 membrane protein 53146 53718 -1
CDS - ZP_03956399.1 HMPREF0526_1268 pseudouridylate synthase 53935 54648 -1
CDS - ZP_03956400.1 HMPREF0526_1269 segregation and condensation protein B 54648 55247 -1
CDS - ZP_03956401.1 HMPREF0526_1270 possible segregation and condensation protein 55251 55979 -1
CDS ribT ZP_03956402.1 HMPREF0526_1271 reductase 55982 56320 -1
CDS - ZP_03956403.1 HMPREF0526_1272 site-specific recombinase 56323 57225 -1
CDS - ZP_03956404.1 HMPREF0526_1273 RNA-binding protein 57212 58090 -1
CDS kpyK ZP_03956405.1 HMPREF0526_1274 pyruvate kinase 58216 59985 -1
CDS pfk1 ZP_03956406.1 HMPREF0526_1275 6-phosphofructokinase 60017 60976 -1
CDS dnaE ZP_03956407.1 HMPREF0526_1276 possible DNA-directed DNA polymerase 61144 64266 -1
CDS - ZP_03956408.1 HMPREF0526_1277 conserved hypothetical protein 64267 64578 1
CDS - ZP_03956409.1 HMPREF0526_1278 hypothetical protein 64629 65012 -1
CDS - ZP_03956410.1 HMPREF0526_1279 hypothetical protein 65021 65353 -1
CDS yfkN ZP_03956411.1 HMPREF0526_1280 nucleotidase 65458 67023 -1
CDS rpmF ZP_03956412.1 HMPREF0526_1281 50S ribosomal protein L32 67092 67277 -1
CDS - ZP_03956413.1 HMPREF0526_1282 conserved hypothetical protein 67384 67644 -1
CDS - ZP_03956414.1 HMPREF0526_1283 short chain dehydrogenase 67644 68438 -1
CDS rnz ZP_03956415.1 HMPREF0526_1284 ribonuclease Z 68442 69371 -1
CDS - ZP_03956416.1 HMPREF0526_1285 acyltransferase 69387 71303 -1
CDS - ZP_03956417.1 HMPREF0526_1286 GTPase 71322 72620 -1
CDS uvrC ZP_03956418.1 HMPREF0526_1287 excinuclease ABC subunit C 72704 74515 -1
CDS - ZP_03956419.1 HMPREF0526_1288 alkaline phosphatase 74624 75235 1
CDS - ZP_03956420.1 HMPREF0526_1289 hypothetical protein 75405 75641 1
CDS - ZP_03956421.1 HMPREF0526_1290 hypothetical protein 75885 76079 1
CDS - ZP_03956422.1 HMPREF0526_1291 APC family amino acid-polyamine-organocation transporter 76144 77526 1
CDS - ZP_03956423.1 HMPREF0526_1292 purine nucleosidase 77592 78530 1
CDS - ZP_03956424.1 HMPREF0526_1293 aminoglycoside N(3')-acetyltransferase 78735 79544 -1
CDS - ZP_03956425.1 HMPREF0526_1294 phosphoenolpyruvate-dependent PTS family mannose/fructose/sorbose porter component EIIAB 79910 80305 1
CDS - ZP_03956426.1 HMPREF0526_1295 phosphoenolpyruvate-dependent PTS family mannose/fructose/sorbose porter component EIIAB 80332 80823 1
CDS - ZP_03956427.1 HMPREF0526_1296 PTS family mannose/fructose/sorbose porter component IIC 80823 81605 1
CDS - ZP_03956428.1 HMPREF0526_1297 PTS family mannose/fructose/sorbose porter component IID 81595 82395 1
CDS - ZP_03956429.1 HMPREF0526_1298 possible P-ATPase superfamily cation transporter 82543 83343 -1
CDS - ZP_03956430.1 HMPREF0526_1299 cation-transporting atpase 83340 84938 -1
CDS - ZP_03956431.1 HMPREF0526_1300 aspartate--ammonia ligase 84969 86024 -1
CDS - ZP_03956432.1 HMPREF0526_1301 hypothetical protein 86326 86802 -1
CDS - ZP_03956433.1 HMPREF0526_1302 hypothetical protein 86865 87059 -1
CDS - ZP_03956434.1 HMPREF0526_1303 oxygen-insensitive NAD(P)H nitroreductase 87466 88017 -1
CDS - ZP_03956435.1 HMPREF0526_1304 hypothetical protein 88201 88329 1
CDS - ZP_03956436.1 HMPREF0526_1305 GTPase 88360 88950 -1
CDS clpX ZP_03956437.1 HMPREF0526_1306 ATP-dependent protease ATP-binding subunit 88934 90217 -1
CDS tig ZP_03956438.1 HMPREF0526_1307 trigger factor 90331 91644 -1
CDS - ZP_03956439.1 HMPREF0526_1308 elongation factor Tu 91846 93036 -1
CDS - ZP_03956440.1 HMPREF0526_1309 conserved hypothetical protein 93211 94044 -1
CDS - ZP_03956441.1 HMPREF0526_1310 metallo-beta-lactamase superfamily hydrolase 94037 95776 -1
CDS rpsO ZP_03956442.1 HMPREF0526_1311 30S ribosomal protein S15 95918 96187 -1
CDS rpsT ZP_03956443.1 HMPREF0526_1312 30S ribosomal protein S20 96394 96645 1
CDS - ZP_03956444.1 HMPREF0526_1313 possible DNA-directed DNA polymerase III delta subunit 96697 97683 -1
CDS - ZP_03956445.1 HMPREF0526_1314 possible competence protein ComEC 97697 98644 -1
CDS - ZP_03956446.1 HMPREF0526_1315 possible competence protein ComEC 98692 99948 -1
CDS comEA ZP_03956447.1 HMPREF0526_1316 competence protein ComEA 99917 100567 -1
CDS - ZP_03956448.1 HMPREF0526_1317 possible S16 family peptidase 100647 101045 -1
CDS - ZP_03956449.1 HMPREF0526_1318 possible S16 family peptidase 101153 101677 -1
CDS coaD ZP_03956450.1 HMPREF0526_1319 phosphopantetheine adenylyltransferase 101667 102194 -1
CDS rsmD ZP_03956451.1 HMPREF0526_1320 possible rRNA (guanine-N(2)-)-methyltransferase 102166 102717 -1
CDS - ZP_03956452.1 HMPREF0526_1321 conserved hypothetical protein 102714 103046 -1
CDS - ZP_03956453.1 HMPREF0526_1322 FtsW/RodA/SpoVE family cell division protein 103043 104236 -1
CDS - ZP_03956454.1 HMPREF0526_1323 BipAEFTU family GTPbinding protein 104344 106209 -1
CDS def ZP_03956455.1 HMPREF0526_1324 peptide deformylase 106422 106976 1
CDS - ZP_03956456.1 HMPREF0526_1325 conserved hypothetical protein 107155 107379 1
CDS - ZP_03956457.1 HMPREF0526_1326 metallo-beta-lactamase 107383 109065 1
CDS - ZP_03956458.1 HMPREF0526_1327 exodeoxyribonuclease V alpha subunit 109173 111527 -1
CDS - ZP_03956459.1 HMPREF0526_1328 TPR repeat-containing protein 111527 112168 -1
CDS - ZP_03956460.1 HMPREF0526_1329 phosphoglycerate mutase 112168 112827 -1
CDS - ZP_03956461.1 HMPREF0526_1330 LysR family transcriptional regulator 112877 113737 -1
CDS yphH ZP_03956462.1 HMPREF0526_1331 cupin superfamily protein 113838 114236 1
CDS - ZP_03956463.1 HMPREF0526_1332 4-carboxymuconolactone decarboxylase 114248 114556 1
CDS - ZP_03956464.1 HMPREF0526_1333 conserved hypothetical protein 114653 122782 -1
CDS - ZP_03956465.1 HMPREF0526_1334 hypothetical protein 122920 123237 -1
CDS - ZP_03956466.1 HMPREF0526_1335 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 123387 124514 -1
CDS - ZP_03956467.1 HMPREF0526_1336 conserved hypothetical protein 124528 124863 -1
CDS iscS ZP_03956468.1 HMPREF0526_1337 cysteine desulfurase 124915 126078 -1
CDS mtnN ZP_03956469.1 HMPREF0526_1338 possible adenosylhomocysteine nucleosidase 126097 126786 -1
CDS - ZP_03956470.1 HMPREF0526_1339 conserved hypothetical protein 126800 127078 -1
CDS - ZP_03956471.1 HMPREF0526_1340 ADP-ribose pyrophosphatase 127071 127637 -1
CDS - ZP_03956472.1 HMPREF0526_1341 cold-shock protein 127637 127858 -1
CDS ileS ZP_03956473.1 HMPREF0526_1342 isoleucyl-tRNA synthetase 127858 130740 -1
CDS - ZP_03956474.1 HMPREF0526_1343 cell-division initiation protein 130867 131598 -1
CDS - ZP_03956475.1 HMPREF0526_1344 ribosomal protein S4e 131568 132248 -1
CDS - ZP_03956476.1 HMPREF0526_1345 cell division membrane protein 132437 132724 -1