xBASE Logo
About | Contact | Home

Lactobacillus ultunensis DSM 16047, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_04012260.1 HMPREF0548_1978 dipeptidase 58 1482 -1
CDS - ZP_04012261.1 HMPREF0548_1979 transcriptional regulator raffinose operon 1543 2400 -1
CDS - ZP_04012262.1 HMPREF0548_1980 NCS2 family nucleobase:cation symporter-2 2538 3818 -1
CDS xpt ZP_04012263.1 HMPREF0548_1981 xanthine phosphoribosyltransferase 3825 4403 -1
CDS guaA ZP_04012264.1 HMPREF0548_1982 bifunctional GMP synthase/glutamine amidotransferase protein 4767 6317 1
CDS - ZP_04012265.1 HMPREF0548_1983 hypothetical protein 6336 6458 1
CDS - ZP_04012266.1 HMPREF0548_1984 AcrR family transcriptional regulator 6559 7113 -1
CDS - ZP_04012267.1 HMPREF0548_1985 drug resistance transporter EmrB/QacA subfamily precursor 7290 9071 1
CDS - ZP_04012268.1 HMPREF0548_1986 conserved hypothetical protein 9237 9650 1
CDS - ZP_04012269.1 HMPREF0548_1987 transcriptional regulator 9684 10019 -1
CDS - ZP_04012270.1 HMPREF0548_1988 NADPH:quinone reductase 10173 11018 1
CDS - ZP_04012271.1 HMPREF0548_1989 conserved hypothetical protein 11015 11191 1
CDS - ZP_04012272.1 HMPREF0548_1990 tRNA ligase 11525 12364 1
CDS - ZP_04012273.1 HMPREF0548_1991 MFS family major facilitator transporter, multidrug:cation symporter 12368 13738 1
CDS - ZP_04012274.1 HMPREF0548_1992 hypothetical protein 14016 14204 -1
CDS - ZP_04012275.1 HMPREF0548_1993 helix-turn-helix motif protein 14307 15284 -1
CDS - ZP_04012276.1 HMPREF0548_1994 conserved hypothetical protein 15478 15738 1
CDS - ZP_04012277.1 HMPREF0548_1995 death-on-curing (DOC) family protein 15741 16145 1
CDS - ZP_04012278.1 HMPREF0548_1996 metal-dependent membrane protease 16613 17398 1
CDS - ZP_04012279.1 HMPREF0548_1997 S-methyltransferase 17458 17982 1
CDS - ZP_04012280.1 HMPREF0548_1998 MFS family major facilitator transporter, multidrug:cation symporter 18047 19450 1
CDS - ZP_04012281.1 HMPREF0548_1999 transcriptional regulator 19460 19903 1
CDS - ZP_04012282.1 HMPREF0548_2000 protein of hypothetical function DUF344 19961 20842 -1
CDS - ZP_04012283.1 HMPREF0548_2001 conserved hypothetical protein 20946 21410 1
CDS - ZP_04012284.1 HMPREF0548_2002 conserved hypothetical protein 21428 21943 -1
CDS - ZP_04012285.1 HMPREF0548_2003 conserved hypothetical protein 22099 22413 -1
CDS - ZP_04012286.1 HMPREF0548_2004 possible strepthothricin acetyltransferase 22406 22930 -1
CDS - ZP_04012287.1 HMPREF0548_2005 conserved hypothetical protein 23211 23540 1
CDS glyA ZP_04012288.1 HMPREF0548_2006 serine hydroxymethyltransferase 23607 24842 1
CDS - ZP_04012289.1 HMPREF0548_2007 APC family amino acid-polyamine-organocation transporter 24934 26526 1
CDS - ZP_04012290.1 HMPREF0548_2008 possible sugar-phosphatase 26561 27391 -1
CDS - ZP_04012291.1 HMPREF0548_2009 glucan 1,6-alpha-glucosidase 27513 29132 1
CDS - ZP_04012292.1 HMPREF0548_2010 LacI family transcriptional regulator 29238 30272 1
CDS ydhO ZP_04012293.1 HMPREF0548_2011 PTS family beta-glucoside [arbutin-salicin-cellobiose] (ASC) porter component IIC 30366 31670 1
CDS - ZP_04012294.1 HMPREF0548_2012 hypothetical protein 31685 32116 1
CDS agaR3 ZP_04012295.1 HMPREF0548_2013 alpha-galactosidase 32126 34351 1
CDS - ZP_04012296.1 HMPREF0548_2014 ribosomal protein L31 34439 34684 1
CDS murF ZP_04012297.1 HMPREF0548_2015 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 34810 36177 1
CDS - ZP_04012298.1 HMPREF0548_2016 DEAD box ATP-dependent RNA helicase SrmB 36191 37681 1
CDS acpS ZP_04012299.1 HMPREF0548_2017 holo-acyl-carrier protein 37736 38119 1
CDS alr ZP_04012300.1 HMPREF0548_2018 alanine racemase 38123 39253 1
CDS - ZP_04012301.1 HMPREF0548_2019 hypothetical protein 39299 39757 -1
CDS - ZP_04012302.1 HMPREF0548_2020 TetR family transcriptional regulator 39841 40548 1
CDS - ZP_04012303.1 HMPREF0548_2021 cystathionine beta-synthase (CBS) domain protein 40610 41317 -1
CDS ldh ZP_04012304.1 HMPREF0548_2022 L-lactate dehydrogenase 41501 42472 -1
CDS pth ZP_04012305.1 HMPREF0548_2023 peptidyl-tRNA hydrolase 42608 43165 1
CDS trcF ZP_04012306.1 HMPREF0548_2024 transcriptional repair coupling factor 43167 46661 1
CDS - ZP_04012307.1 HMPREF0548_2025 S4 RNA-binding domain protein 46642 46920 1
CDS - ZP_04012308.1 HMPREF0548_2026 possible septum formation initiator protein 46996 47373 1
CDS - ZP_04012309.1 HMPREF0548_2027 S1 family RNA-binding protein 47373 47735 1
CDS - ZP_04012310.1 HMPREF0548_2028 tRNA(Ile)-lysidine synthetase, MesJ 47777 49054 1
CDS - ZP_04012311.1 HMPREF0548_2029 M41 family endopeptidase FtsH 49129 51282 1
CDS - ZP_04012312.1 HMPREF0548_2030 heat shock protein Hsp33 51335 52225 1
CDS - ZP_04012313.1 HMPREF0548_2031 tRNA-dihydrouridine synthase 52304 53329 1
CDS lysS ZP_04012314.1 HMPREF0548_2032 lysine--tRNA ligase 53329 54891 1
CDS - ZP_04012315.1 HMPREF0548_2033 regulator 55722 56198 1
tRNA - - HMPREF0548_t0053 tRNA-Gly 56493 56567 1
tRNA - - HMPREF0548_t0054 tRNA-Gly 56688 56762 1
tRNA - - HMPREF0548_t0055 tRNA-Pro 56799 56872 1
CDS - ZP_04012316.1 HMPREF0548_2034 GAF domain protein 56950 57405 1
CDS clpC ZP_04012317.1 HMPREF0548_2035 ATPase 57509 59995 1
CDS rpoB ZP_04012318.1 HMPREF0548_2036 DNA-directed RNA polymerase subunit beta 60304 63858 1
CDS rpoC ZP_04012319.1 HMPREF0548_2037 DNA-directed RNA polymerase subunit beta' 63901 67527 1
CDS - ZP_04012320.1 HMPREF0548_2038 prepilin peptidase 67589 68116 -1
CDS - ZP_04012321.1 HMPREF0548_2039 ribosomal protein S12 68455 68862 1
CDS - ZP_04012322.1 HMPREF0548_2040 ribosomal protein S7 68878 69348 1
CDS - ZP_04012323.1 HMPREF0548_2041 elongation factor EF2 69382 71475 1
CDS rpsJ ZP_04012324.1 HMPREF0548_2042 30S ribosomal protein S10 71794 72102 1
CDS rplC ZP_04012325.1 HMPREF0548_2043 50S ribosomal protein L3 72126 72764 1
CDS rplD ZP_04012326.1 HMPREF0548_2044 50S ribosomal protein L4 72779 73396 1
CDS - ZP_04012327.1 HMPREF0548_2045 ribosomal protein L23 73396 73701 1
CDS - ZP_04012328.1 HMPREF0548_2046 ribosomal protein L2 73762 74553 1
CDS - ZP_04012329.1 HMPREF0548_2047 ribosomal protein S19 74572 74856 1
CDS - ZP_04012330.1 HMPREF0548_2048 ribosomal protein L22 74876 75229 1
CDS rpsC ZP_04012331.1 HMPREF0548_2049 30S ribosomal protein S3 75243 75917 1
CDS - ZP_04012332.1 HMPREF0548_2050 ribosomal protein L16 75917 76357 1
CDS rpmC ZP_04012333.1 HMPREF0548_2051 50S ribosomal protein L29 76347 76544 1
CDS - ZP_04012334.1 HMPREF0548_2052 ribosomal protein S17 76626 76829 1
CDS - ZP_04012335.1 HMPREF0548_2053 ribosomal protein L14 76861 77229 1
CDS rplX ZP_04012336.1 HMPREF0548_2054 50S ribosomal protein L24 77249 77482 1
CDS rplE ZP_04012337.1 HMPREF0548_2055 50S ribosomal protein L5 77497 78039 1
CDS - ZP_04012338.1 HMPREF0548_2056 ribosomal protein S14 78052 78237 1
CDS - ZP_04012339.1 HMPREF0548_2057 ribosomal protein S8 78262 78660 1
CDS - ZP_04012340.1 HMPREF0548_2058 ribosomal protein L6 78685 79215 1
CDS rplR ZP_04012341.1 HMPREF0548_2059 50S ribosomal protein L18 79242 79601 1
CDS - ZP_04012342.1 HMPREF0548_2060 ribosomal protein S5 79619 80125 1
CDS rpmD ZP_04012343.1 HMPREF0548_2061 50S ribosomal protein L30 80142 80327 1
CDS rplO ZP_04012344.1 HMPREF0548_2062 50S ribosomal protein L15 80351 80791 1
CDS secY ZP_04012345.1 HMPREF0548_2063 preprotein translocase subunit SecY 80791 82086 1
CDS adk ZP_04012346.1 HMPREF0548_2064 adenylate kinase 82097 82753 1
CDS - ZP_04012347.1 HMPREF0548_2065 initiation factor IF1 82827 83048 1
CDS rpmJ ZP_04012348.1 HMPREF0548_2066 50S ribosomal protein L36 83065 83181 1
CDS - ZP_04012349.1 HMPREF0548_2067 ribosomal protein S13 83209 83559 1
CDS - ZP_04012350.1 HMPREF0548_2068 ribosomal protein S11 83584 83973 1
CDS rpoA ZP_04012351.1 HMPREF0548_2069 DNA-directed RNA polymerase subunit alpha 84019 84957 1
CDS rplQ ZP_04012352.1 HMPREF0548_2070 50S ribosomal protein L17 84983 85366 1
CDS - ZP_04012353.1 HMPREF0548_2071 ABC superfamily ATP binding cassette transporter, ABC protein 85551 86402 1
CDS - ZP_04012354.1 HMPREF0548_2072 ABC superfamily ATP binding cassette transporter, ABC protein 86378 87232 1
CDS - ZP_04012355.1 HMPREF0548_2073 ABC superfamily ATP binding cassette transporter, membrane protein 87229 88026 1
CDS truA ZP_04012356.1 HMPREF0548_2074 tRNA pseudouridine synthase A 88029 88817 1