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Loktanella vestfoldensis SKA53, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_01002998.1 SKA53_13346 50S ribosomal protein L2 219 1061 1
CDS - ZP_01002999.1 SKA53_13351 ribosomal protein S19 1064 1342 1
CDS - ZP_01003000.1 SKA53_13356 50S ribosomal protein L22 1346 1726 1
CDS rpsC ZP_01003001.1 SKA53_13361 30S ribosomal protein S3 1726 2442 1
CDS - ZP_01003002.1 SKA53_13366 50S ribosomal protein L16 2455 2868 1
CDS - ZP_01003003.1 SKA53_13371 hypothetical protein 2972 3151 -1
CDS - ZP_01003004.1 SKA53_13376 hypothetical protein 3265 3885 -1
CDS - ZP_01003005.1 SKA53_13381 Ribosomal protein L29 4093 4299 1
CDS - ZP_01003006.1 SKA53_13386 ribosomal protein S17 4304 4534 1
CDS - ZP_01003007.1 SKA53_13391 ribosomal protein L14 4614 4982 1
CDS - ZP_01003008.1 SKA53_13396 ribosomal protein L24 4985 5290 1
CDS - ZP_01003009.1 SKA53_13401 ribosomal protein L5 5290 5853 1
CDS - ZP_01003010.1 SKA53_13406 ribosomal protein S14 5889 6179 1
CDS - ZP_01003011.1 SKA53_13411 ribosomal protein S8 6192 6584 1
CDS - ZP_01003012.1 SKA53_13416 50S ribosomal protein L6 6594 7127 1
CDS - ZP_01003013.1 SKA53_13421 ribosomal protein L18 7139 7504 1
CDS rpsE ZP_01003014.1 SKA53_13426 30S ribosomal protein S5 7631 8215 1
CDS - ZP_01003015.1 SKA53_13431 ribosomal protein L30 8219 8407 1
CDS - ZP_01003016.1 SKA53_13436 ribosomal protein L15 8675 9163 1
CDS - ZP_01003017.1 SKA53_13441 preprotein translocase SecY 9290 10630 1
CDS - ZP_01003018.1 SKA53_13446 adenylate kinase 10627 11205 1
CDS - ZP_01003019.1 SKA53_13451 30S ribosomal protein S13 11460 11774 1
CDS - ZP_01003020.1 SKA53_13456 30S ribosomal protein S11 11788 12177 1
CDS - ZP_01003021.1 SKA53_13461 DNA-directed RNA polymerase alpha subunit 12292 13308 1
CDS - ZP_01003022.1 SKA53_13466 Ribosomal protein L17 13493 13912 1
CDS - ZP_01003023.1 SKA53_13471 ATPase, AAA family 13998 15308 1
CDS - ZP_01003024.1 SKA53_13476 hypothetical protein 15340 15699 1
CDS - ZP_01003025.1 SKA53_13481 ribosomal large subunit pseudouridine synthase C 15696 16751 1
CDS - ZP_01003026.1 SKA53_13486 HAD-superfamily hydrolase, subfamily IA, variant 1 16744 17421 1
CDS - ZP_01003027.1 SKA53_13491 hypothetical protein 17418 18143 1
CDS - ZP_01003028.1 SKA53_13496 glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein 18348 19367 1
CDS - ZP_01003029.1 SKA53_13501 ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztB 19494 20708 1
CDS - ZP_01003030.1 SKA53_13506 ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztC 20710 22203 1
CDS - ZP_01003031.1 SKA53_13511 glutamate/glutamine/aspartate/asparagine ABC transporter, ATP-binding protein 22216 23010 1
CDS - ZP_01003032.1 SKA53_13516 hypothetical protein 23051 23566 -1
CDS - ZP_01003033.1 SKA53_13521 hypothetical protein 23563 24201 -1
CDS - ZP_01003034.1 SKA53_13526 acetylglutamate kinase 24204 25079 -1
CDS - ZP_01003035.1 SKA53_13531 GTP-binding protein 25076 25723 -1
CDS - ZP_01003036.1 SKA53_13536 putative inner membrane protein translocase component YidC 25739 27556 -1
CDS - ZP_01003037.1 SKA53_13541 hypothetical protein 27712 27867 -1
CDS - ZP_01003038.1 SKA53_13546 Asp-tRNA Asn/Glu-tRNA Gln amidotransferase subunit A 27860 29248 -1
CDS - ZP_01003039.1 SKA53_13551 TRAP-T family transporter, DctM (12 TMs) subunit 29235 30632 -1
CDS - ZP_01003040.1 SKA53_13556 TRAP-T family transporter, small (4 TMs) inner membrane subunit 30700 31281 -1
CDS - ZP_01003041.1 SKA53_13561 TRAP-T family transporter, periplasmic binding protein 31358 32506 -1
CDS - ZP_01003042.1 SKA53_13566 probable dehydrogenase 32696 33661 -1
CDS - ZP_01003043.1 SKA53_13571 antisigma-factor antagonist, STAS 33922 35412 1
CDS - ZP_01003044.1 SKA53_13576 hypothetical protein 35423 36283 1
CDS - ZP_01003045.1 SKA53_13581 hypothetical protein 36554 37420 1
CDS - ZP_01003046.1 SKA53_13586 hypothetical protein 37359 38522 1
CDS - ZP_01003047.1 SKA53_13591 putative Na+/H+ antiporter with cyclic nucleotide-binding domain 38485 41019 -1
CDS - ZP_01003048.1 SKA53_13596 hypothetical protein 41009 41119 1
CDS - ZP_01003049.1 SKA53_13601 hypothetical protein 41110 41328 -1
CDS - ZP_01003050.1 SKA53_13606 3-demethylubiquinone-9 3-methyltransferase 41325 41717 -1
CDS - ZP_01003051.1 SKA53_13611 3-demethylubiquinone-9 3-methyltransferase 41714 42418 -1
CDS - ZP_01003052.1 SKA53_13616 hypothetical protein 42408 43241 -1
CDS - ZP_01003053.1 SKA53_13621 probable deoxyribodipyrimidine photolyase 43213 44151 -1
CDS - ZP_01003054.1 SKA53_13626 putative ubiquinol-cytochrome-c reductase assembly protein 44141 45418 -1
CDS - ZP_01003055.1 SKA53_13631 hypothetical protein 45514 46941 -1
CDS - ZP_01003056.1 SKA53_13636 Predicted DNA-binding protein 46938 48161 -1
CDS - ZP_01003057.1 SKA53_13641 putative transcription regulator protein 48238 49140 -1
CDS - ZP_01003058.1 SKA53_13646 putative methyltransferase protein 49252 50790 1
CDS - ZP_01003059.1 SKA53_13651 3-hydroxyisobutyrate dehydrogenase 50801 51697 1
CDS - ZP_01003060.1 SKA53_13656 hypothetical protein 51699 52445 -1
CDS - ZP_01003061.1 SKA53_13661 hypothetical protein 52506 52868 -1
CDS - ZP_01003062.1 SKA53_13666 hypothetical protein 52945 53784 -1
CDS - ZP_01003063.1 SKA53_13671 hypothetical protein 53781 55868 -1
CDS - ZP_01003064.1 SKA53_13676 hypothetical protein 56028 57293 -1
CDS - ZP_01003065.1 SKA53_13681 serine/threonine protein phosphatase, putative 57293 58243 -1
CDS - ZP_01003066.1 SKA53_13686 hypothetical protein 58227 59051 -1
CDS - ZP_01003067.1 SKA53_13691 serine/threonine protein kinase 59107 61158 -1
CDS - ZP_01003068.1 SKA53_13696 glyceraldehyde-3-phosphate dehydrogenase, type I 61562 62575 1
CDS - ZP_01003069.1 SKA53_13701 ABC transporter, ATP-binding protein 62684 63607 1
CDS - ZP_01003070.1 SKA53_13706 ABC transporter, permease protein 63607 64368 1
CDS - ZP_01003071.1 SKA53_13711 peptidase, family S49 64417 65208 1
CDS - ZP_01003072.1 SKA53_13716 short chain dehydrogenase 65205 65372 1
CDS - ZP_01003073.1 SKA53_13721 oxidoreductase, short chain dehydrogenase/reductase family 65414 66145 1
CDS - ZP_01003074.1 SKA53_13726 excinuclease ABC subunit C 66431 68299 1
CDS - ZP_01003075.1 SKA53_13731 Phosphatidylglycerol phosphate synthase 68388 68978 1
CDS - ZP_01003076.1 SKA53_13736 molybdopterin converting factor, subunit 1 68975 69220 1
CDS - ZP_01003077.1 SKA53_13741 Molybdopterin converting factor subunit 2 69220 69660 1
CDS - ZP_01003078.1 SKA53_13746 DNA-3-methyladenine glycosylase I 69646 70227 -1
CDS - ZP_01003079.1 SKA53_13751 EAL domain protein 70296 71102 1
CDS - ZP_01003080.1 SKA53_13756 acetyl-CoA acetyltransferase 71246 72421 1
CDS - ZP_01003081.1 SKA53_13761 beta-ketothiolase, acetoacetyl-CoA reductase 72481 73206 1
CDS - ZP_01003082.1 SKA53_13766 hypothetical protein 73299 73466 -1
CDS - ZP_01003083.1 SKA53_13771 N-6 Adenine-specific DNA methylase 73584 74351 -1
CDS - ZP_01003084.1 SKA53_13776 hypothetical protein 74332 74550 -1
CDS - ZP_01003085.1 SKA53_13781 decaprenyl diphosphate synthase 74606 75604 1
CDS - ZP_01003086.1 SKA53_13786 TRAP dicarboxylate transporter, DctP subunit 75684 76718 -1
CDS - ZP_01003087.1 SKA53_13791 hypothetical protein 76798 78297 -1
CDS - ZP_01003088.1 SKA53_13796 methionine aminopeptidase, type I 78301 79113 -1
CDS - ZP_01003089.1 SKA53_13801 molybdenum cofactor biosynthesis domain protein 79251 79952 1
CDS - ZP_01003090.1 SKA53_13806 acetyltransferase, GNAT family 79949 80704 1
CDS - ZP_01003091.1 SKA53_13811 alkylhydroperoxidase AhpD family core domain protein 80712 81245 1
CDS - ZP_01003092.1 SKA53_13816 OmpA/MotB family protein 81242 82165 1
CDS - ZP_01003093.1 SKA53_13821 GGDEF domain protein 82171 82920 -1
CDS - ZP_01003094.1 SKA53_13826 transcriptional regulator, LysR family 82997 83902 -1
CDS - ZP_01003095.1 SKA53_13831 2,4-dienoyl-CoA reductase 84088 86112 -1
CDS - ZP_01003096.1 SKA53_13836 hypothetical protein 86220 86585 -1
CDS - ZP_01003097.1 SKA53_13841 hypothetical protein 86596 87369 -1