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Loktanella vestfoldensis SKA53, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_01004418.1 SKA53_03379 isocitrate dehydrogenase 1 101 -1
CDS - ZP_01004419.1 SKA53_03384 ribosomal small subunit pseudouridine synthase A 370 1104 1
tRNA - - SKA53_t03938 tRNA-Met 1336 1409 -1
CDS - ZP_01004420.1 SKA53_03389 phosphoribosylaminoimidazole synthetase 1588 2628 1
CDS - ZP_01004421.1 SKA53_03394 phosphoribosylglycinamide formyltransferase 2691 3221 1
CDS - ZP_01004422.1 SKA53_03399 ribonuclease D 3279 4436 1
CDS - ZP_01004423.1 SKA53_03404 Fe-S metabolism associated family protein 4469 4879 1
CDS - ZP_01004424.1 SKA53_03409 hypothetical protein 4851 5498 -1
CDS - ZP_01004425.1 SKA53_03414 hypothetical protein 5488 5667 -1
CDS - ZP_01004426.1 SKA53_03419 putative dimethylamine corrinoid protein 5720 6427 -1
CDS - ZP_01004427.1 SKA53_03424 methionine synthase I 6698 7717 -1
CDS - ZP_01004428.1 SKA53_03429 hypothetical protein 7735 8049 -1
CDS - ZP_01004429.1 SKA53_03434 phosphoribosylaminoimidazole-succinocarboxamide synthase 8182 8943 1
CDS - ZP_01004430.1 SKA53_03439 phosphoribosylformylglycinamidine synthase, PurS protein 8984 9214 1
CDS - ZP_01004431.1 SKA53_03444 phosphoribosylformylglycinamidine synthase I 9215 9883 1
CDS - ZP_01004432.1 SKA53_03449 C4-dicarboxylate transport sensor protein DctB, putative 9929 11683 1
CDS - ZP_01004433.1 SKA53_03454 C4-dicarboxylate transport transcriptional regulatory protein DctD 11693 13024 1
CDS - ZP_01004434.1 SKA53_03459 Ribonuclease E 13446 16043 1
CDS - ZP_01004435.1 SKA53_03464 hypothetical protein 16175 16402 -1
CDS - ZP_01004436.1 SKA53_03469 putative cytochrome c-type biogenesis protein CcdA 16421 17251 1
CDS - ZP_01004437.1 SKA53_03474 hypothetical protein 17281 18549 1
CDS - ZP_01004438.1 SKA53_03479 cytochrome P450 family protein 18546 19901 1
CDS - ZP_01004439.1 SKA53_03484 hypothetical protein 19959 20081 1
CDS - ZP_01004440.1 SKA53_03489 hypothetical protein 20066 20299 -1
CDS - ZP_01004441.1 SKA53_03494 hypothetical protein 20300 20476 -1
CDS - ZP_01004442.1 SKA53_03499 Fumarate lyase 20473 21864 -1
CDS - ZP_01004443.1 SKA53_03504 hypothetical protein 21930 22427 -1
CDS - ZP_01004444.1 SKA53_03509 chromate transporter 22458 23708 -1
CDS - ZP_01004445.1 SKA53_03514 hypothetical protein 23720 24367 -1
CDS - ZP_01004446.1 SKA53_03519 coproporphyrinogen III oxidase 24799 25155 -1
CDS - ZP_01004447.1 SKA53_03524 Coproporphyrinogen III oxidase, oxygen-independent (HemN) 25204 26553 -1
CDS - ZP_01004448.1 SKA53_03529 regulatory protein SenC 26614 27219 -1
CDS - ZP_01004449.1 SKA53_03534 hypothetical protein 27280 27732 -1
CDS - ZP_01004450.1 SKA53_03539 hypothetical protein 27782 28180 -1
CDS - ZP_01004451.1 SKA53_03544 ABC polyamine transporter, periplasmic substrate-binding protein 28297 29319 -1
CDS - ZP_01004452.1 SKA53_03549 hypothetical protein 29487 30221 1
CDS - ZP_01004453.1 SKA53_03554 hypothetical protein 30235 30876 1
CDS - ZP_01004454.1 SKA53_03559 oxidoreductase, zinc-binding dehydrogenase family 30940 31923 1
CDS - ZP_01004455.1 SKA53_03564 aminotransferase, class V 31916 33130 1
CDS - ZP_01004456.1 SKA53_03569 deoxyribodipyrimidine photolyase 33127 34542 1
CDS - ZP_01004457.1 SKA53_03574 Cyclopropane-fatty-acyl-phospholipid synthase CfaS 34644 35852 1
CDS - ZP_01004458.1 SKA53_03579 Tellurite resistance protein 35933 36373 1
CDS - ZP_01004459.1 SKA53_03584 O-acetylserine (Thiol)-lyase, cysteine synthase 36497 37531 1
CDS - ZP_01004460.1 SKA53_03589 mechanosensitive ion channel family protein 37528 39840 1
CDS - ZP_01004461.1 SKA53_03594 hypothetical protein 39837 40553 1
CDS - ZP_01004462.1 SKA53_03599 probable protease precursor 40557 41183 1
CDS - ZP_01004463.1 SKA53_03604 hypothetical protein 41180 42334 -1
tRNA - - SKA53_t03936 tRNA-Ser 42461 42547 1
CDS - ZP_01004464.1 SKA53_03609 SEC-C motif protein 43113 43541 -1
CDS - ZP_01004465.1 SKA53_03614 probable high affinity sulfate transporter (SulP) 43802 45553 -1
CDS - ZP_01004466.1 SKA53_03619 sulfatase family protein 45555 47219 -1
CDS - ZP_01004467.1 SKA53_03624 cytochrome P450 47219 49405 -1
CDS - ZP_01004468.1 SKA53_03629 3-alpha-hydroxysteroid dehydrogenase 49402 50214 -1
CDS - ZP_01004469.1 SKA53_03634 LysR-family transcriptional regulator 50272 51207 1
CDS - ZP_01004470.1 SKA53_03639 putative extracellular solute-binding protein 51325 52359 1
CDS - ZP_01004471.1 SKA53_03644 hypothetical protein 52471 52902 1
CDS - ZP_01004472.1 SKA53_03649 TRAP dicarboxylate transporter, DctM subunit 52914 54209 1
CDS - ZP_01004473.1 SKA53_03654 aldehyde dehydrogenase family protein 54223 55698 1
CDS - ZP_01004474.1 SKA53_03659 3-carboxy-cis,cis-muconate cycloisomerase 55830 56885 1
CDS - ZP_01004475.1 SKA53_03664 3-oxoadipate CoA-transferase, beta subunit 56910 57536 -1
CDS - ZP_01004476.1 SKA53_03669 3-ketoacid CoA transferase alpha subunit 57536 57769 -1
CDS - ZP_01004477.1 SKA53_03674 3-oxoadipate CoA-succinyl transferase, alpha subunit 57766 58230 -1
CDS - ZP_01004478.1 SKA53_03679 hypothetical protein 58227 59063 -1
CDS - ZP_01004479.1 SKA53_03684 protocatechuate 3,4-dioxygenase alpha chain 59071 59688 -1
CDS - ZP_01004480.1 SKA53_03689 protocatechuate 3,4-dioxygenase beta chain 59691 60437 -1
CDS - ZP_01004481.1 SKA53_03694 4-carboxymuconolactone decarboxylase 60434 60814 -1
CDS - ZP_01004482.1 SKA53_03699 3-oxoadipate enol-lactone hydrolase 60807 61595 -1
CDS - ZP_01004483.1 SKA53_03704 4-hydroxybenzoate 3-monooxygenase 61595 62764 -1
CDS - ZP_01004484.1 SKA53_03709 pca operon transcriptional activator PcaQ 62853 63779 1
CDS - ZP_01004485.1 SKA53_03714 possible response regulator 63772 65244 1
CDS - ZP_01004486.1 SKA53_03719 cytochrome P450 65331 66569 1
CDS - ZP_01004487.1 SKA53_03724 hypothetical protein 66569 67630 1
CDS - ZP_01004488.1 SKA53_03729 hypothetical protein 67677 69470 1
CDS - ZP_01004489.1 SKA53_03734 hypothetical protein 69525 70130 1
CDS - ZP_01004490.1 SKA53_03739 succinate-semialdehyde dehydrogenase 70141 71580 1
CDS - ZP_01004491.1 SKA53_03744 metal dependent phosphohydrolase 71577 72188 1
CDS - ZP_01004492.1 SKA53_03749 probable short-chain dehydrogenase, secreted 72190 72951 1
CDS - ZP_01004493.1 SKA53_03754 ferredoxin 72962 73276 1
CDS - ZP_01004494.1 SKA53_03759 rubredoxin reductase 73280 74509 1
CDS - ZP_01004495.1 SKA53_03764 hypothetical protein 74988 75419 -1
CDS - ZP_01004496.1 SKA53_03769 hypothetical protein 75680 75955 -1
CDS - ZP_01004497.1 SKA53_03774 hypothetical protein 75952 78822 -1
CDS - ZP_01004498.1 SKA53_03779 hypothetical protein 79206 79580 -1
CDS - ZP_01004499.1 SKA53_03784 putative phage integrase 79577 80830 -1
CDS - ZP_01004500.1 SKA53_03789 isoquinoline 1-oxidoreductase, beta subunit, putative 81451 83628 -1
CDS - ZP_01004501.1 SKA53_03794 isoquinoline 1-oxidoreductase, alpha subunit 83698 84156 -1
CDS - ZP_01004502.1 SKA53_03799 transcriptional regulator, AraC family 84370 85362 1
CDS - ZP_01004503.1 SKA53_03804 inner membrane protein 85391 85804 -1
CDS - ZP_01004504.1 SKA53_03809 hypothetical protein 85926 86339 -1
CDS - ZP_01004505.1 SKA53_03814 hypothetical protein 86430 86924 -1
CDS - ZP_01004506.1 SKA53_03819 oxidoreductase, short-chain dehydrogenase/reductase family 86968 87747 -1
CDS - ZP_01004507.1 SKA53_03824 virulence regulating protein 87895 88908 1
CDS - ZP_01004508.1 SKA53_03829 hypothetical protein 89042 89431 -1
CDS - ZP_01004509.1 SKA53_03834 resolvase 89431 90363 -1
CDS - ZP_01004510.1 SKA53_03839 hypothetical protein 90405 90680 1
CDS - ZP_01004511.1 SKA53_03844 hypothetical protein 90744 91136 1
CDS - ZP_01004512.1 SKA53_03849 Na+/H+ antiporter NhaP 91227 92465 1
CDS - ZP_01004513.1 SKA53_03854 polyhydroxybutyrate depolymerase 92800 93711 -1
CDS - ZP_01004514.1 SKA53_03859 hypothetical protein 93927 94610 -1
CDS - ZP_01004515.1 SKA53_03864 hypothetical protein 95276 95512 -1