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Oceanicola granulosus HTCC2516, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_01154712.1 OG2516_10181 hypothetical protein 50 340 -1
CDS - ZP_01154713.1 OG2516_10186 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 529 1353 1
CDS - ZP_01154714.1 OG2516_10191 hypothetical protein 1533 1766 1
CDS - ZP_01154715.1 OG2516_10196 hypothetical protein 1834 2076 1
CDS - ZP_01154716.1 OG2516_10201 hypothetical protein 2114 2422 1
CDS - ZP_01154717.1 OG2516_10206 ribosomal protein S15 2534 2803 -1
CDS - ZP_01154718.1 OG2516_10211 hypothetical protein 2946 3473 -1
CDS truB ZP_01154719.1 OG2516_10216 tRNA pseudouridine synthase B 3588 3767 1
CDS - ZP_01154720.1 OG2516_10221 tRNA pseudouridine synthase B 3770 4675 -1
CDS - ZP_01154721.1 OG2516_10226 hypothetical protein 4707 5441 -1
CDS - ZP_01154722.1 OG2516_10231 ribosome-binding factor A 5438 5869 -1
CDS - ZP_01154723.1 OG2516_10236 dihydrodipicolinate reductase 5924 6736 1
CDS - ZP_01154724.1 OG2516_10241 hypothetical protein 6836 7201 1
CDS - ZP_01154725.1 OG2516_10246 hypothetical protein 7198 7371 -1
CDS - ZP_01154726.1 OG2516_10251 ribosomal RNA small subunit methyltransferase B, putative 7444 8742 1
CDS - ZP_01154727.1 OG2516_10256 hypothetical protein 8857 10575 1
CDS purH ZP_01154728.1 OG2516_10261 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 10572 12158 1
CDS - ZP_01154729.1 OG2516_10266 lipoprotein signal peptidase 12167 12670 1
CDS - ZP_01154730.1 OG2516_10271 hypothetical protein 12724 13242 1
CDS - ZP_01154731.1 OG2516_10276 peptidase, M16 family protein 13336 14679 1
CDS - ZP_01154732.1 OG2516_10281 putative zinc protease 14676 16013 1
CDS - ZP_01154733.1 OG2516_10286 transcriptional regulator, XRE family protein 16172 16414 1
CDS - ZP_01154734.1 OG2516_10291 DNA mismatch repair protein 16461 18287 1
CDS - ZP_01154735.1 OG2516_10296 hypothetical protein 18409 18801 1
CDS - ZP_01154736.1 OG2516_10301 hypothetical protein 18788 19312 -1
CDS - ZP_01154737.1 OG2516_10306 Anti-sigma factor ChrR 19360 20013 -1
CDS - ZP_01154738.1 OG2516_10311 RNA polymerase sigma-70 factor 20017 20538 -1
CDS - ZP_01154739.1 OG2516_10316 Putative cyclopropane/cyclopropene fatty acid synthesis protein, flavin amine oxidase 20791 22086 1
CDS - ZP_01154740.1 OG2516_10321 Putative cyclopropane/cyclopropene fatty acid synthesis protein 22086 22838 1
CDS - ZP_01154741.1 OG2516_10326 Salt-stress induced outer membrane protein 22957 23778 -1
CDS - ZP_01154742.1 OG2516_10331 formate dehydrogenase, alpha subunit 24013 26787 -1
CDS - ZP_01154743.1 OG2516_10336 phosphoglycerate mutase family protein 27293 27613 1
CDS - ZP_01154744.1 OG2516_10341 saccharopine dehydrogenase (NAD+, L-lysine forming) 27613 28650 1
CDS - ZP_01154745.1 OG2516_10346 Short-chain dehydrogenase/reductase family member 28654 29397 -1
CDS - ZP_01154746.1 OG2516_10351 phenylalanyl-tRNA synthetase, alpha subunit 29713 30786 1
CDS - ZP_01154747.1 OG2516_10356 putative lysyl-tRNA synthetase 30930 31958 -1
CDS - ZP_01154748.1 OG2516_10361 elongation factor P 32034 32600 1
CDS - ZP_01154749.1 OG2516_10366 pyrazinamidase/nicotinamidase 32656 33258 -1
CDS - ZP_01154750.1 OG2516_10371 Putative transporter, RarD family, DMT superfamily protein 33272 34204 -1
CDS - ZP_01154751.1 OG2516_10376 hypothetical protein 34276 35382 -1
CDS - ZP_01154752.1 OG2516_10381 Putative glucose dehydrogenase B 35379 36575 -1
CDS - ZP_01154753.1 OG2516_10386 4Fe-4S ferredoxin, iron-sulfur cluster binding protein 36618 37655 -1
CDS - ZP_01154754.1 OG2516_10391 glutathione S-transferase family protein 37738 38403 -1
CDS - ZP_01154755.1 OG2516_10396 Peptidoglycan transglycosylase 38477 39103 -1
CDS - ZP_01154756.1 OG2516_10401 glutamate synthase, large subunit 39449 43990 -1
CDS - ZP_01154757.1 OG2516_10406 hypothetical protein 43987 44439 -1
CDS - ZP_01154758.1 OG2516_10411 hypothetical protein 44432 44827 -1
CDS - ZP_01154759.1 OG2516_10416 hypothetical protein 44906 45607 -1
CDS - ZP_01154760.1 OG2516_10421 hypothetical protein 45604 46311 -1
CDS - ZP_01154761.1 OG2516_10426 Glutamate synthase (beta subunit) 46416 47849 -1
CDS - ZP_01154762.1 OG2516_10431 undecaprenol kinase, putative 48067 48870 1
CDS - ZP_01154763.1 OG2516_10436 NADH-ubiquinone oxidoreductase 48867 49871 -1
tRNA - - OG2516_t11913 tRNA-Leu 50032 50115 1
CDS - ZP_01154764.1 OG2516_10441 hypothetical protein 50297 52198 -1
CDS - ZP_01154765.1 OG2516_10446 putative sugar uptake ABC transporter ATP-binding protein 52224 53288 -1
CDS - ZP_01154766.1 OG2516_10451 hypothetical protein 53285 54112 -1
CDS - ZP_01154767.1 OG2516_10456 putative sugar uptake ABC transporter permease protein 54109 55011 -1
CDS - ZP_01154768.1 OG2516_10461 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor 55091 56314 -1
CDS - ZP_01154769.1 OG2516_10466 hypothetical protein 56437 57336 -1
CDS - ZP_01154770.1 OG2516_10471 putative exported oxidoreductase protein 57369 58406 -1
CDS - ZP_01154771.1 OG2516_10476 putative transcriptional regulator protein 58526 59551 1
CDS - ZP_01154772.1 OG2516_10481 saccharopine dehydrogenase family protein 59613 60848 -1
CDS - ZP_01154773.1 OG2516_10486 hypothetical protein 60881 61978 -1
CDS - ZP_01154774.1 OG2516_10491 hypothetical protein 62096 62791 -1
CDS - ZP_01154775.1 OG2516_10496 hydrolase, alpha/beta fold family protein 62788 63483 -1
CDS - ZP_01154776.1 OG2516_10501 hypothetical protein 63522 64490 -1
CDS - ZP_01154777.1 OG2516_10506 hypothetical protein 64626 65615 -1
CDS - ZP_01154778.1 OG2516_10511 transcriptional regulator 65624 66658 -1
CDS - ZP_01154779.1 OG2516_10516 2-keto-3-deoxygluconate oxidoreductase 66672 67436 -1
CDS - ZP_01154780.1 OG2516_10521 hypothetical protein 67436 68500 -1
CDS - ZP_01154781.1 OG2516_10526 histidinol dehydrogenase 68506 69816 -1
CDS - ZP_01154782.1 OG2516_10531 hypothetical protein 69813 70331 -1
CDS - ZP_01154783.1 OG2516_10536 ABC transporter, permease protein, MalFG family protein 70362 71273 -1
CDS - ZP_01154784.1 OG2516_10541 ABC transporter, membrane spanning protein 71284 72315 -1
CDS - ZP_01154785.1 OG2516_10546 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor 72418 73674 -1
CDS - ZP_01154786.1 OG2516_10551 sugar ABC transportor ATP-binding protein 73762 74811 -1
CDS - ZP_01154787.1 OG2516_10556 transcriptional regulator, LysR family protein 74904 75833 1
CDS - ZP_01154788.1 OG2516_10561 hypothetical protein 76020 76958 1
tRNA - - OG2516_t11921 tRNA-Lys 77029 77101 -1
CDS - ZP_01154789.1 OG2516_10566 diaminopimelate epimerase 77154 78008 1
CDS - ZP_01154790.1 OG2516_10571 MiaB-like tRNA modifying enzyme 78001 79257 1
CDS - ZP_01154791.1 OG2516_10576 Glutathione S-transferase 79329 79931 1
CDS - ZP_01154792.1 OG2516_10581 hypothetical protein 79928 80578 -1
CDS - ZP_01154793.1 OG2516_10586 chorismate synthase 80718 81824 -1
CDS - ZP_01154794.1 OG2516_10591 ABC thiamine transporter, periplasmic substrate-binding protein 82161 83144 1
CDS thiP ZP_01154795.1 OG2516_10596 thiamin ABC transporter membrane component 83152 84657 1
CDS - ZP_01154796.1 OG2516_10601 ABC thiamine transporter, ATPase subunit 84731 85333 1
CDS - ZP_01154797.1 OG2516_10606 hypothetical protein 85339 85596 1
CDS - ZP_01154798.1 OG2516_10611 Cytochrome c1 precursor 85787 86674 -1
CDS - ZP_01154799.1 OG2516_10616 ubiquinol--cytochrome c reductase, cytochrome B 86689 88032 -1
CDS - ZP_01154800.1 OG2516_10621 Ubiquinol-cytochrome C reductase, iron-sulfur protein 88045 88638 -1
CDS - ZP_01154801.1 OG2516_10626 membrane protein, putative 88820 89713 -1
CDS - ZP_01154802.1 OG2516_10631 DNA-binding protein HU 89798 90085 -1
CDS - ZP_01154803.1 OG2516_10636 AMP nucleosidase 90272 91726 -1
CDS - ZP_01154804.1 OG2516_10641 putative DNA topoisomerase I protein 91866 92846 1
CDS - ZP_01154805.1 OG2516_10646 hypothetical protein 92848 93270 1
CDS - ZP_01154806.1 OG2516_10651 hypothetical protein 93347 94195 1
CDS - ZP_01154807.1 OG2516_10656 succinyl-diaminopimelate desuccinylase 94183 95331 -1
CDS - ZP_01154808.1 OG2516_10661 hypothetical protein 95391 95579 -1
CDS - ZP_01154809.1 OG2516_10666 Putative ATP-dependent protease La, LON 95576 96214 -1