• Summary page

Sequences

• contig00001, whole genome shotgun sequence
• contig00003, whole genome shotgun sequence
• contig00006, whole genome shotgun sequence
• contig00007, whole genome shotgun sequence
• contig00009, whole genome shotgun sequence
• contig00010, whole genome shotgun sequence
• contig00017, whole genome shotgun sequence
• contig00019, whole genome shotgun sequence
• contig00021, whole genome shotgun sequence
• contig00022, whole genome shotgun sequence
• contig00023, whole genome shotgun sequence
• contig00024, whole genome shotgun sequence
• contig00025, whole genome shotgun sequence
• contig00026, whole genome shotgun sequence
• contig00027, whole genome shotgun sequence
• contig00028, whole genome shotgun sequence
• contig00029, whole genome shotgun sequence
• contig00030, whole genome shotgun sequence
• contig00031, whole genome shotgun sequence
• contig00032, whole genome shotgun sequence
• contig00033, whole genome shotgun sequence
• contig00034, whole genome shotgun sequence
• contig00035, whole genome shotgun sequence
• contig00036, whole genome shotgun sequence
• contig00037, whole genome shotgun sequence
• contig00038, whole genome shotgun sequence
• contig00039, whole genome shotgun sequence
• contig00040, whole genome shotgun sequence
• contig00041, whole genome shotgun sequence
• contig00042, whole genome shotgun sequence
• contig00043, whole genome shotgun sequence
• contig00044, whole genome shotgun sequence
• contig00045, whole genome shotgun sequence
• contig00046, whole genome shotgun sequence
• contig00047, whole genome shotgun sequence
• contig00048, whole genome shotgun sequence
• contig00049, whole genome shotgun sequence
• contig00050, whole genome shotgun sequence
• contig00051, whole genome shotgun sequence
• contig00052, whole genome shotgun sequence
• contig00053, whole genome shotgun sequence
• contig00054, whole genome shotgun sequence
• contig00055, whole genome shotgun sequence
• contig00056, whole genome shotgun sequence
• contig00057, whole genome shotgun sequence
• contig00058, whole genome shotgun sequence
• contig00059, whole genome shotgun sequence
• contig00060, whole genome shotgun sequence
• contig00061, whole genome shotgun sequence
• contig00062, whole genome shotgun sequence
• contig00063, whole genome shotgun sequence
• contig00064, whole genome shotgun sequence
• contig00065, whole genome shotgun sequence
• contig00066, whole genome shotgun sequence
• contig00068, whole genome shotgun sequence
• contig00076, whole genome shotgun sequence
• contig00077, whole genome shotgun sequence
• contig00080, whole genome shotgun sequence
• contig00082, whole genome shotgun sequence
• contig00099, whole genome shotgun sequence
• contig00108, whole genome shotgun sequence

Taxonomy

cellular organisms
» Bacteria
» Firmicutes
» Clostridia
» Clostridiales
» Clostridiales incertae sedis
» Clostridiales Family XI. Incertae Sedis
» Peptoniphilus
» Peptoniphilus duerdenii

Peptoniphilus duerdenii ATCC BAA-1640

HMPREF9225_0134 - CAAX amino protease

Analysis Tools

View alignment of region with nucmer

Design primers within region using Primer3Plus

View region in Artemis

Retrieve HMPREF9225_0134 nucleotide sequence in FASTA format

Retrieve HMPREF9225_0134 protein sequence in FASTA format

Retrieve HMPREF9225_0134 nucleotide sequence with 10 50 100 200 400 600 800 1000 2000 bp. flanking sequence
Include translation of coding sequence
Include complementary strand.

Run NCBI BLASTP PSI-BLAST against the Non-redundant protein sequences (nr) SwissProt Protein Data Bank (PDB) database using HMPREF9225_0134 protein sequence
(optional - restrict search to taxonomic group: root cellular organisms Bacteria Firmicutes Clostridia Clostridiales Clostridiales incertae sedis Clostridiales Family XI. Incertae Sedis Peptoniphilus Peptoniphilus duerdenii )

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Annotation

Product:

CAAX amino protease

GenBank ID: ZP_07398788.1

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