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Peptoniphilus duerdenii ATCC BAA-1640 contig00030, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS blpI ZP_07398949.1 HMPREF9225_0295 hypothetical protein 426 608 1
CDS - ZP_07398950.1 HMPREF9225_0296 glycerol-3-phosphate transporter 605 736 1
CDS - ZP_07398951.1 HMPREF9225_0297 hypothetical protein 787 981 1
CDS - ZP_07398952.1 HMPREF9225_0298 hypothetical protein 1376 1573 -1
CDS - ZP_07398953.1 HMPREF9225_0299 hypothetical protein 1999 2253 -1
CDS - ZP_07398954.1 HMPREF9225_0300 dehydratase 2269 3558 -1
CDS - ZP_07398955.1 HMPREF9225_0301 hypothetical protein 3548 4327 -1
CDS hgdC ZP_07398956.1 HMPREF9225_0302 (R)-2-hydroxyglutaryl-CoA dehydratase activator 4324 5076 -1
CDS - ZP_07398957.1 HMPREF9225_0303 hypothetical protein 5215 5745 -1
CDS - ZP_07398958.1 HMPREF9225_0304 membrane protein 5804 6703 1
CDS - ZP_07398959.1 HMPREF9225_0305 hypothetical protein 6906 7169 1
CDS - ZP_07398960.1 HMPREF9225_0306 diguanylate cyclase 7346 7990 -1
CDS - ZP_07398961.1 HMPREF9225_0307 ABC superfamily ATP binding cassette transporter, ABC protein 7994 8872 -1
CDS gntR ZP_07398962.1 HMPREF9225_0308 GntR family transcriptional regulator 8869 9171 -1
CDS - ZP_07398963.1 HMPREF9225_0309 hypothetical protein 10364 11392 -1
CDS entB ZP_07398964.1 HMPREF9225_0310 isochorismatase transposase 11507 12046 -1
CDS - ZP_07398965.1 HMPREF9225_0311 alpha/beta hydrolase fold family hydrolase 12192 13073 -1
CDS - ZP_07398966.1 HMPREF9225_0312 beta-lactamase 13066 13860 -1
CDS - ZP_07398967.1 HMPREF9225_0313 hypothetical protein 13867 15453 -1
CDS - ZP_07398968.1 HMPREF9225_0314 YjbE family integral membrane protein 15434 16333 -1
CDS - ZP_07398969.1 HMPREF9225_0315 cysteine dioxygenase 16352 16480 -1
CDS yfiA ZP_07398970.1 HMPREF9225_0316 ribosomal subunit interface protein 17538 18062 -1
CDS - ZP_07398971.1 HMPREF9225_0317 TRAP transporter, 4TM/12TM fusion protein 18131 19957 1
CDS - ZP_07398972.1 HMPREF9225_0318 TRAP transporter solute receptor TAXI family protein 19941 20876 1
CDS - ZP_07398973.1 HMPREF9225_0319 hypothetical protein 20873 21235 1
CDS - ZP_07398974.1 HMPREF9225_0320 hypothetical protein 21236 21712 1
CDS - ZP_07398975.1 HMPREF9225_0321 MATE efflux family protein 22209 23594 -1
CDS - ZP_07398976.1 HMPREF9225_0322 oligopeptide ABC superfamily ATP binding cassette transporter substrate-binding protein 23741 25441 1
CDS dppB2 ZP_07398977.1 HMPREF9225_0323 dipeptide ABC superfamily ATP binding cassette transporter, membrane protein 25504 26424 1
CDS dppC2 ZP_07398978.1 HMPREF9225_0324 oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein 26428 27261 1
CDS - ZP_07398979.1 HMPREF9225_0325 ABC superfamily ATP binding cassette transporter, ABC protein 27261 28217 1
CDS - ZP_07398980.1 HMPREF9225_0326 ABC superfamily ATP binding cassette transporter, ABC protein 28189 28971 1
CDS - ZP_07398981.1 HMPREF9225_0327 LysR family transcriptional regulator 29093 29920 1
CDS - ZP_07398982.1 HMPREF9225_0328 sugar ABC superfamily ATP binding cassette transporter permease protein 29984 30826 -1
CDS - ZP_07398983.1 HMPREF9225_0329 sugar ABC superfamily ATP binding cassette transporter permease protein 30823 31698 -1
CDS - ZP_07398984.1 HMPREF9225_0330 sugar ABC superfamily ATP binding cassette transporter, ABC protein 31673 32710 -1
CDS - ZP_07398985.1 HMPREF9225_0331 hypothetical protein 32858 34114 1
CDS - ZP_07398986.1 HMPREF9225_0332 hypothetical protein 34169 34402 -1
CDS gufA ZP_07398987.1 HMPREF9225_0333 ZIP family zinc (Zn2+)-iron (Fe2+) permease 34493 35257 -1
CDS - ZP_07398988.1 HMPREF9225_0334 hypothetical protein 35267 35905 -1
CDS sigB ZP_07398989.1 HMPREF9225_0335 RNA polymerase sigma-B factor 35902 36684 -1
CDS - ZP_07398990.1 HMPREF9225_0336 hypothetical protein 36677 37021 -1
CDS spoIIAA ZP_07398991.1 HMPREF9225_0337 anti-sigma F factor antagonist 37022 37327 -1
CDS gyrA ZP_07398992.1 HMPREF9225_0338 DNA topoisomerase (ATP-hydrolyzing) subunit A 37327 39759 -1
CDS gyrB ZP_07398993.1 HMPREF9225_0339 DNA topoisomerase (ATP-hydrolyzing) subunit B 39767 41680 -1
CDS recF ZP_07398994.1 HMPREF9225_0340 recombination protein F 41677 42762 -1
CDS - ZP_07398995.1 HMPREF9225_0341 S4 domain protein 42759 42962 -1
CDS dnaN ZP_07398996.1 HMPREF9225_0342 DNA-directed DNA polymerase III beta subunit 42959 44035 -1
CDS dnaA ZP_07398997.1 HMPREF9225_0343 DNA-directed DNA replication initiator protein 44186 45529 -1
CDS jag ZP_07398998.1 HMPREF9225_0344 SpoIIIJ-associated protein Jag 45949 46857 -1
CDS oxaA ZP_07398999.1 HMPREF9225_0345 membrane protein OxaA 46857 47573 -1
CDS - ZP_07399000.1 HMPREF9225_0346 alpha-hemolysin 47583 47798 -1
CDS rnpA ZP_07399001.1 HMPREF9225_0347 ribonuclease P protein component 47795 48115 -1
CDS rpmH ZP_07399002.1 HMPREF9225_0348 50S ribosomal protein L34 48115 48249 -1
CDS - ZP_07399003.1 HMPREF9225_0349 hypothetical protein 48448 49047 1
CDS - ZP_07399004.1 HMPREF9225_0350 antibiotic ABC superfamily ATP binding cassette transporter 49057 51111 1
CDS - ZP_07399005.1 HMPREF9225_0351 hypothetical protein 51124 53547 1
CDS - ZP_07399006.1 HMPREF9225_0352 hypothetical protein 53621 54037 -1
CDS pyrP ZP_07399007.1 HMPREF9225_0353 NCS family uracil:cation symporter 54186 55436 1
CDS - ZP_07399008.1 HMPREF9225_0354 NSS family amino acid:sodium (Na+) symporter 55505 56812 1
CDS agcS ZP_07399009.1 HMPREF9225_0355 AGCS family alanine/glycine:sodium (Na+) symporter 57087 58454 1
CDS - ZP_07399010.1 HMPREF9225_0356 hypothetical protein 58540 58659 1
CDS - ZP_07399011.1 HMPREF9225_0357 single-stranded DNA-binding protein 1 58786 58944 -1
CDS - ZP_07399012.1 HMPREF9225_0358 hypothetical protein 59540 59773 1
CDS proC ZP_07399013.1 HMPREF9225_0359 pyrroline-5-carboxylate reductase 59954 60688 -1
CDS - ZP_07399014.1 HMPREF9225_0360 CHR family chromate ion efflux pump 60696 61250 -1
CDS - ZP_07399015.1 HMPREF9225_0361 chromate transport protein 61247 61798 -1
CDS msrB ZP_07399016.1 HMPREF9225_0362 methionine-R-sulfoxide reductase 61869 62300 -1
CDS - ZP_07399017.1 HMPREF9225_0363 RelB/DinJ family addiction module antitoxin 62371 62724 -1
CDS - ZP_07399018.1 HMPREF9225_0364 hypothetical protein 62801 63574 1
CDS - ZP_07399019.1 HMPREF9225_0365 ABC superfamily ATP binding cassette transporter, ABC protein 63702 65576 -1
CDS rex ZP_07399020.1 HMPREF9225_0366 redox-sensing transcriptional repressor Rex 65720 66337 1
CDS - ZP_07399021.1 HMPREF9225_0367 hypothetical protein 66527 67165 1
CDS ogg1 ZP_07399022.1 HMPREF9225_0368 possible DNA-(apurinic or apyrimidinic site) lyase 67298 68173 1
CDS - ZP_07399023.1 HMPREF9225_0369 hypothetical protein 68173 68856 1
CDS - ZP_07399024.1 HMPREF9225_0370 phosphoribosylformylglycinamidine synthase 69099 73979 1
CDS groES ZP_07399025.1 HMPREF9225_0371 chaperone GroES 74230 74511 1
CDS groEL ZP_07399026.1 HMPREF9225_0372 chaperonin GroEL 74524 76146 1
CDS - ZP_07399027.1 HMPREF9225_0373 probable ribonuclease 76382 76975 1
CDS comEB ZP_07399028.1 HMPREF9225_0374 competence protein ComEB 76972 77394 1
CDS mscL ZP_07399029.1 HMPREF9225_0375 large conductance mechanosensitive channel protein 77422 77871 1
CDS mutT ZP_07399030.1 HMPREF9225_0376 phosphohydrolase 77871 78488 1
CDS - ZP_07399031.1 HMPREF9225_0377 hypothetical protein 78760 79758 1
CDS - ZP_07399032.1 HMPREF9225_0378 hypothetical protein 79931 80665 1
CDS sorA ZP_07399033.1 HMPREF9225_0379 PTS family sorbose porter, IIC component 80744 81106 1
CDS - ZP_07399034.1 HMPREF9225_0380 response regulator 81303 81956 1
CDS - ZP_07399035.1 HMPREF9225_0381 two component system sensor histidine kinase 81944 82816 1
CDS - ZP_07399036.1 HMPREF9225_0382 ABC superfamily ATP binding cassette transporter, ABC protein 82905 83582 1
CDS - ZP_07399037.1 HMPREF9225_0383 hypothetical protein 83545 86046 1
CDS nrdB ZP_07399038.1 HMPREF9225_0384 ribonucleotide-diphosphate reductase beta subunit 86083 87126 -1
CDS nrdA ZP_07399039.1 HMPREF9225_0385 ribonucleotide-diphosphate reductase alpha subunit 87136 89658 -1
CDS trmE ZP_07399040.1 HMPREF9225_0386 tRNA modification GTPase TrmE 89836 91209 1
CDS gidA ZP_07399041.1 HMPREF9225_0387 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 91224 93125 1
CDS gidB ZP_07399042.1 HMPREF9225_0388 16S rRNA methyltransferase GidB 93118 93822 1
CDS - ZP_07399043.1 HMPREF9225_0389 hypothetical protein 93932 94105 1
CDS - ZP_07399044.1 HMPREF9225_0390 hypothetical protein 94168 94395 -1
CDS soj ZP_07399045.1 HMPREF9225_0391 sporulation initiation inhibitor protein Soj 95014 95775 1
CDS spo0J ZP_07399046.1 HMPREF9225_0392 stage 0 sporulation protein J 95772 96812 1
CDS phzF ZP_07399047.1 HMPREF9225_0393 phenazine biosynthesis protein PhzF family protein 96809 97693 1
CDS - ZP_07399048.1 HMPREF9225_0394 hypothetical protein 97690 98121 1
CDS - ZP_07399049.1 HMPREF9225_0395 serine--pyruvate transaminase 98131 99252 1
CDS - ZP_07399050.1 HMPREF9225_0396 hypothetical protein 99693 99841 -1