• Summary page

Sequences

• contig00001, whole genome shotgun sequence
• contig00003, whole genome shotgun sequence
• contig00006, whole genome shotgun sequence
• contig00007, whole genome shotgun sequence
• contig00009, whole genome shotgun sequence
• contig00010, whole genome shotgun sequence
• contig00017, whole genome shotgun sequence
• contig00019, whole genome shotgun sequence
• contig00021, whole genome shotgun sequence
• contig00022, whole genome shotgun sequence
• contig00023, whole genome shotgun sequence
• contig00024, whole genome shotgun sequence
• contig00025, whole genome shotgun sequence
• contig00026, whole genome shotgun sequence
• contig00027, whole genome shotgun sequence
• contig00028, whole genome shotgun sequence
• contig00029, whole genome shotgun sequence
• contig00030, whole genome shotgun sequence
• contig00031, whole genome shotgun sequence
• contig00032, whole genome shotgun sequence
• contig00033, whole genome shotgun sequence
• contig00034, whole genome shotgun sequence
• contig00035, whole genome shotgun sequence
• contig00036, whole genome shotgun sequence
• contig00037, whole genome shotgun sequence
• contig00038, whole genome shotgun sequence
• contig00039, whole genome shotgun sequence
• contig00040, whole genome shotgun sequence
• contig00041, whole genome shotgun sequence
• contig00042, whole genome shotgun sequence
• contig00043, whole genome shotgun sequence
• contig00044, whole genome shotgun sequence
• contig00045, whole genome shotgun sequence
• contig00046, whole genome shotgun sequence
• contig00047, whole genome shotgun sequence
• contig00048, whole genome shotgun sequence
• contig00049, whole genome shotgun sequence
• contig00050, whole genome shotgun sequence
• contig00051, whole genome shotgun sequence
• contig00052, whole genome shotgun sequence
• contig00053, whole genome shotgun sequence
• contig00054, whole genome shotgun sequence
• contig00055, whole genome shotgun sequence
• contig00056, whole genome shotgun sequence
• contig00057, whole genome shotgun sequence
• contig00058, whole genome shotgun sequence
• contig00059, whole genome shotgun sequence
• contig00060, whole genome shotgun sequence
• contig00061, whole genome shotgun sequence
• contig00062, whole genome shotgun sequence
• contig00063, whole genome shotgun sequence
• contig00064, whole genome shotgun sequence
• contig00065, whole genome shotgun sequence
• contig00066, whole genome shotgun sequence
• contig00068, whole genome shotgun sequence
• contig00076, whole genome shotgun sequence
• contig00077, whole genome shotgun sequence
• contig00080, whole genome shotgun sequence
• contig00082, whole genome shotgun sequence
• contig00099, whole genome shotgun sequence
• contig00108, whole genome shotgun sequence

Taxonomy

cellular organisms
» Bacteria
» Firmicutes
» Clostridia
» Clostridiales
» Clostridiales incertae sedis
» Clostridiales Family XI. Incertae Sedis
» Peptoniphilus
» Peptoniphilus duerdenii

Peptoniphilus duerdenii ATCC BAA-1640

nucH - prophage LambdaCh01

Analysis Tools

View alignment of region with nucmer

Design primers within region using Primer3Plus

View region in Artemis

Retrieve nucH nucleotide sequence in FASTA format

Retrieve nucH protein sequence in FASTA format

Retrieve HMPREF9225_0764 nucleotide sequence with 10 50 100 200 400 600 800 1000 2000 bp. flanking sequence
Include translation of coding sequence
Include complementary strand.

Run NCBI BLASTP PSI-BLAST against the Non-redundant protein sequences (nr) SwissProt Protein Data Bank (PDB) database using HMPREF9225_0764 protein sequence
(optional - restrict search to taxonomic group: root cellular organisms Bacteria Firmicutes Clostridia Clostridiales Clostridiales incertae sedis Clostridiales Family XI. Incertae Sedis Peptoniphilus Peptoniphilus duerdenii )

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Annotation

Product:

prophage LambdaCh01

GenBank ID: ZP_07399418.1

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