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Peptoniphilus duerdenii ATCC BAA-1640 contig00056, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_07399850.1 HMPREF9225_1196 cellulosome-anchoring protein 1 1082 1
CDS - ZP_07399851.1 HMPREF9225_1197 TetR family transcriptional regulator 1142 1780 1
CDS - ZP_07399852.1 HMPREF9225_1198 myosin-cross-reactive antigen 1773 3671 1
CDS - ZP_07399853.1 HMPREF9225_1199 probable potassium channel protein 3744 4754 -1
CDS - ZP_07399854.1 HMPREF9225_1200 hypothetical protein 4837 6282 1
CDS - ZP_07399855.1 HMPREF9225_1201 copper amine oxidase domain protein 6374 7222 1
CDS - ZP_07399856.1 HMPREF9225_1202 GNAT family acetyltransferase 7337 7780 1
CDS - ZP_07399857.1 HMPREF9225_1203 hypothetical protein 8038 8241 1
CDS - ZP_07399858.1 HMPREF9225_1204 3-hydroxyacyl-CoA dehydrogenase 9912 10877 1
CDS - ZP_07399859.1 HMPREF9225_1205 major facilitator family transporter 10937 12154 1
CDS - ZP_07399860.1 HMPREF9225_1206 Mug G:T/U mismatch-specific DNA glycosylase 12175 12675 1
CDS - ZP_07399861.1 HMPREF9225_1207 MATE efflux family protein 12701 14002 -1
CDS - ZP_07399862.1 HMPREF9225_1208 hypothetical protein 14092 14538 1
CDS - ZP_07399863.1 HMPREF9225_1209 hypothetical protein 14596 15396 1
CDS - ZP_07399864.1 HMPREF9225_1210 HIRAN domain protein 15396 15794 1
CDS nucH2 ZP_07399865.1 HMPREF9225_1211 thermonuclease 15819 17018 1
CDS gpo ZP_07399866.1 HMPREF9225_1212 glutathione peroxidase 17137 17619 -1
CDS mraZ ZP_07399867.1 HMPREF9225_1213 cell division protein MraZ 17787 18263 1
CDS mraW ZP_07399868.1 HMPREF9225_1214 S-adenosyl-methyltransferase MraW 18260 19204 1
CDS - ZP_07399869.1 HMPREF9225_1215 septum formation initiator 19206 19586 1
CDS pbpB ZP_07399870.1 HMPREF9225_1216 penicillin-binding protein 2B 19596 21929 1
CDS mraY ZP_07399871.1 HMPREF9225_1217 phospho-N-acetylmuramoyl-pentapeptide- transferase 21939 22889 1
CDS murD ZP_07399872.1 HMPREF9225_1218 UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase 22900 24195 1
CDS ftsW ZP_07399873.1 HMPREF9225_1219 bacterial cell division membrane protein 24198 25283 1
CDS murG ZP_07399874.1 HMPREF9225_1220 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 25285 26385 1
CDS - ZP_07399875.1 HMPREF9225_1221 FtsQ-type superfamily POTRA domain protein 26375 27118 1
CDS ftsZ ZP_07399876.1 HMPREF9225_1222 cell division protein FtsZ 27210 28286 1
CDS nrdR ZP_07399877.1 HMPREF9225_1223 transcriptional regulator NrdR 28385 28837 1
CDS - ZP_07399878.1 HMPREF9225_1224 AAA family ATPase 28841 30145 1
CDS asnS ZP_07399879.1 HMPREF9225_1225 asparagine--tRNA ligase 30196 31578 1
CDS leuS ZP_07399880.1 HMPREF9225_1226 leucine--tRNA ligase 31586 33994 1
CDS - ZP_07399881.1 HMPREF9225_1227 probable neutral zinc metallopeptidase 34178 35044 -1
CDS rpsB ZP_07399882.1 HMPREF9225_1228 30S ribosomal protein S2 35291 36046 1
CDS tsf ZP_07399883.1 HMPREF9225_1229 elongation factor EF1B 36096 36743 1
CDS pyrH ZP_07399884.1 HMPREF9225_1230 UMP kinase 36745 37461 1
CDS frr ZP_07399885.1 HMPREF9225_1231 ribosome recycling factor 37471 38025 1
CDS uppS ZP_07399886.1 HMPREF9225_1232 di-trans,poly-cis-decaprenylcistransferase 38063 38776 1
CDS cdsA ZP_07399887.1 HMPREF9225_1233 phosphatidate cytidylyltransferase 38773 39561 1
CDS rseP ZP_07399888.1 HMPREF9225_1234 RIP metalloprotease RseP 39558 40550 1
CDS ispG ZP_07399889.1 HMPREF9225_1235 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 40547 41602 1
CDS polC ZP_07399890.1 HMPREF9225_1236 DNA polymerase III PolC 41606 45817 1
CDS - ZP_07399891.1 HMPREF9225_1237 protein of hypothetical function DUF150 45923 46387 1
CDS nusA ZP_07399892.1 HMPREF9225_1238 transcription termination factor NusA 46396 47634 1
CDS ylxR ZP_07399893.1 HMPREF9225_1239 cytosolic protein YlxR 47659 47925 1
CDS infB ZP_07399894.1 HMPREF9225_1240 translation initiation factor IF2 47947 50430 1
CDS rbfA ZP_07399895.1 HMPREF9225_1241 ribosome-binding factor A 50427 50789 1
CDS - ZP_07399896.1 HMPREF9225_1242 DHH family phosphoesterase 50767 51729 1
CDS truB ZP_07399897.1 HMPREF9225_1243 tRNA pseudouridine synthase B 51714 52565 1
CDS ribF ZP_07399898.1 HMPREF9225_1244 riboflavin biosynthesis protein RibF 52562 53482 1
CDS rpsO ZP_07399899.1 HMPREF9225_1245 30S ribosomal protein S15 53588 53854 1
CDS pnp ZP_07399900.1 HMPREF9225_1246 polyribonucleotide nucleotidyltransferase 53900 55993 1
CDS dut ZP_07399901.1 HMPREF9225_1247 deoxyuridine 5'-triphosphate nucleotidohydrolase 56053 56484 1
CDS - ZP_07399902.1 HMPREF9225_1248 hypothetical protein 56721 57989 1
CDS - ZP_07399903.1 HMPREF9225_1249 amino acid ABC superfamily ATP binding cassette transporter, membrane protein 58369 60039 1
CDS - ZP_07399904.1 HMPREF9225_1250 ABC superfamily ATP binding cassette transporter, ABC protein 60049 60777 1
CDS rubR ZP_07399905.1 HMPREF9225_1251 rubredoxin 60846 61007 -1
CDS - ZP_07399906.1 HMPREF9225_1252 hypothetical protein 61165 61563 1
CDS typA ZP_07399907.1 HMPREF9225_1253 GTP-binding protein TypA/BipA 61710 63530 1
CDS tnpX ZP_07399908.1 HMPREF9225_1254 TnpX site-specific recombinase 63615 65279 -1
CDS - ZP_07399909.1 HMPREF9225_1255 hypothetical protein 65325 65507 -1
CDS - ZP_07399910.1 HMPREF9225_1256 phage capsid family protein 65507 66454 -1
CDS - ZP_07399911.1 HMPREF9225_1257 hypothetical protein 66603 66815 -1
CDS - ZP_07399912.1 HMPREF9225_1258 hypothetical protein 66927 67328 -1
CDS - ZP_07399913.1 HMPREF9225_1259 phage/plasmid primase 67492 69795 -1
CDS - ZP_07399914.1 HMPREF9225_1260 hypothetical protein 69905 70081 -1
CDS - ZP_07399915.1 HMPREF9225_1261 hypothetical protein 70401 70622 1
CDS - ZP_07399916.1 HMPREF9225_1262 modification methylase FokI 70619 71641 1
CDS - ZP_07399917.1 HMPREF9225_1263 modification methylase FokI 71644 72492 1
CDS fokIR ZP_07399918.1 HMPREF9225_1264 type II site-specific deoxyribonuclease 72501 74270 1
CDS - ZP_07399919.1 HMPREF9225_1265 ATP-dependent endonuclease 74337 76022 1
CDS - ZP_07399920.1 HMPREF9225_1266 hypothetical protein 76257 76559 1
CDS - ZP_07399921.1 HMPREF9225_1267 thioesterase 76528 77046 1
CDS - ZP_07399922.1 HMPREF9225_1268 S-layer region family protein 77088 78734 -1
CDS - ZP_07399923.1 HMPREF9225_1269 hypothetical protein 79024 79899 1
CDS - ZP_07399924.1 HMPREF9225_1270 hypothetical protein 79995 80699 -1
CDS - ZP_07399925.1 HMPREF9225_1271 hypothetical protein 80708 81481 -1
CDS - ZP_07399926.1 HMPREF9225_1272 ABC superfamily ATP binding cassette transporter, ABC protein 81462 82361 -1
CDS - ZP_07399927.1 HMPREF9225_1273 DNA-binding response regulator 82441 83178 1
CDS - ZP_07399928.1 HMPREF9225_1274 two component sensor histidine kinase 83181 84467 1
CDS mrcA ZP_07399929.1 HMPREF9225_1275 penicillin-binding protein 1A 84554 86989 -1
CDS dusB ZP_07399930.1 HMPREF9225_1276 tRNA-dihydrouridine synthase B 87103 88023 1
CDS greA ZP_07399931.1 HMPREF9225_1277 transcription elongation factor GreA 88125 88619 1
CDS lysS ZP_07399932.1 HMPREF9225_1278 lysine--tRNA ligase 88630 90531 1
CDS - ZP_07399933.1 HMPREF9225_1279 hypothetical protein 90691 90876 1
CDS - ZP_07399934.1 HMPREF9225_1280 phage protein 90960 91733 1
CDS - ZP_07399935.1 HMPREF9225_1281 replicative DNA helicase 91730 92557 1
CDS - ZP_07399936.1 HMPREF9225_1282 hypothetical protein 92550 93035 1
CDS - ZP_07399937.1 HMPREF9225_1283 phage antirepressor protein 93032 93766 1
CDS - ZP_07399938.1 HMPREF9225_1284 TraG family protein 93759 94811 1
CDS tnpX2 ZP_07399939.1 HMPREF9225_1285 TnpX site-specific recombinase 94851 96692 1
CDS - ZP_07399940.1 HMPREF9225_1286 TetR family transcriptional regulator 96758 97372 1
CDS - ZP_07399941.1 HMPREF9225_1287 ABC superfamily ATP binding cassette transporter, ABC/membrane protein 97480 99249 1
CDS lmrA2 ZP_07399942.1 HMPREF9225_1288 multidrug resistance ABC transporter ATP-binding and permease protein 99246 100970 1
CDS - ZP_07399943.1 HMPREF9225_1289 membrane protein 100996 101586 1
CDS - ZP_07399944.1 HMPREF9225_1290 hypothetical protein 101586 102314 1
CDS - ZP_07399945.1 HMPREF9225_1291 ABC superfamily ATP binding cassette transporter, ABC protein 102311 103696 1
CDS - ZP_07399946.1 HMPREF9225_1292 hypothetical protein 104009 104425 1
CDS - ZP_07399947.1 HMPREF9225_1293 hypothetical protein 104443 104838 1
CDS - ZP_07399948.1 HMPREF9225_1294 nickase 105083 106735 1
CDS - ZP_07399949.1 HMPREF9225_1295 probable phage-associated protein 106738 107490 1