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Peptoniphilus duerdenii ATCC BAA-1640 contig00059, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS brnQ2 ZP_07400067.1 HMPREF9225_1413 LIVCS family branched chain amino acid:cation symporter 434 1780 1
CDS cpdB ZP_07400068.1 HMPREF9225_1414 2',3'-cyclic-nucleotide 2'-phosphodiesterase 2005 3537 1
CDS xerC ZP_07400069.1 HMPREF9225_1415 tyrosine recombinase XerC 3610 4575 1
CDS - ZP_07400070.1 HMPREF9225_1416 hypothetical protein 4572 6983 1
CDS rexA ZP_07400071.1 HMPREF9225_1417 ATP-dependent nuclease subunit A 6976 10206 1
CDS - ZP_07400072.1 HMPREF9225_1418 S4 RNA-binding domain protein 10203 10448 1
CDS - ZP_07400073.1 HMPREF9225_1419 hypothetical protein 10473 10778 1
CDS vacB ZP_07400074.1 HMPREF9225_1420 general stress protein 13 10795 11172 1
CDS - ZP_07400075.1 HMPREF9225_1421 tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase) 11203 12507 1
CDS hpt ZP_07400076.1 HMPREF9225_1422 hypoxanthine phosphoribosyltransferase 12461 13024 1
CDS ftsH ZP_07400077.1 HMPREF9225_1423 ATP-dependent metalloprotease FtsH 13047 14948 1
CDS - ZP_07400078.1 HMPREF9225_1424 hypothetical protein 15096 16085 -1
CDS - ZP_07400079.1 HMPREF9225_1425 DNA-binding protein 16232 16780 1
CDS potA ZP_07400080.1 HMPREF9225_1426 spermidine/putrescine ABC superfamily ATP binding cassette transporter, ABC protein 16792 17820 1
CDS potB ZP_07400081.1 HMPREF9225_1427 spermidine/putrescine ABC superfamily ATP binding cassette transporter, membrane protein 17823 18650 1
CDS potC ZP_07400082.1 HMPREF9225_1428 spermidine/putrescine ABC superfamily ATP binding cassette transporter, permease protein 18647 19438 1
CDS potD ZP_07400083.1 HMPREF9225_1429 spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein 19425 20486 1
CDS - ZP_07400084.1 HMPREF9225_1430 glucose-1-phosphate adenylyltransferase 20670 21410 1
CDS deoC ZP_07400085.1 HMPREF9225_1431 deoxyribose-phosphate aldolase 21411 22064 1
CDS lgt2 ZP_07400086.1 HMPREF9225_1432 prolipoprotein diacylglyceryl transferase 22061 22807 1
CDS hemN ZP_07400087.1 HMPREF9225_1433 oxygen-independent coproporphyrinogen III oxidase 2 22785 24137 1
CDS murE ZP_07400088.1 HMPREF9225_1434 UDP-N-acetylmuramoylalanyl-D-glutamate-2 24134 25678 1
CDS aspS ZP_07400089.1 HMPREF9225_1435 aspartate--tRNA ligase 25939 27714 1
CDS - ZP_07400090.1 HMPREF9225_1436 possible positive regulator of sigma E, RseC/MucC 27719 28117 1
CDS - ZP_07400091.1 HMPREF9225_1437 hypothetical protein 28114 28944 1
CDS - ZP_07400092.1 HMPREF9225_1438 hypothetical protein 28934 30100 1
CDS engA ZP_07400093.1 HMPREF9225_1439 ribosome-associated GTPase EngA 30243 31571 1
CDS plsY ZP_07400094.1 HMPREF9225_1440 acyl-phosphate glycerol 3-phosphate acyltransferase 31571 32155 1
CDS gpsA ZP_07400095.1 HMPREF9225_1441 glycerol-3-phosphate dehydrogenase 32155 33150 1
CDS - ZP_07400096.1 HMPREF9225_1442 hypothetical protein 33152 34411 1
CDS ylmE ZP_07400097.1 HMPREF9225_1443 YggS family pyridoxal phosphate enzyme 34424 35110 1
CDS - ZP_07400098.1 HMPREF9225_1444 hypothetical protein 35122 35568 1
CDS - ZP_07400099.1 HMPREF9225_1445 hypothetical protein 35562 36311 1
CDS lspA ZP_07400100.1 HMPREF9225_1446 signal peptidase II 36320 36790 1
CDS rluD ZP_07400101.1 HMPREF9225_1447 ribosomal large subunit pseudouridine synthase D 36759 37682 1
CDS plsX2 ZP_07400102.1 HMPREF9225_1448 fatty acid/phospholipid synthesis protein PlsX 37708 38682 1
CDS acpP ZP_07400103.1 HMPREF9225_1449 acyl carrier protein 38679 38912 1
CDS rnc ZP_07400104.1 HMPREF9225_1450 ribonuclease III 38909 39589 1
CDS - ZP_07400105.1 HMPREF9225_1451 radical SAM domain protein 39586 40608 1
CDS - ZP_07400106.1 HMPREF9225_1452 possible chromosome segregation protein Smc 40618 44166 1
CDS ftsY ZP_07400107.1 HMPREF9225_1453 cell division protein FtsY 44173 45471 1
CDS alr ZP_07400108.1 HMPREF9225_1454 alanine racemase 45416 46627 1
CDS - ZP_07400109.1 HMPREF9225_1455 DNA-binding protein 46735 47094 1
CDS ffh ZP_07400110.1 HMPREF9225_1456 signal recognition particle protein 47084 48421 1
CDS rpsP ZP_07400111.1 HMPREF9225_1457 30S ribosomal protein S16 48448 48738 1
CDS - ZP_07400112.1 HMPREF9225_1458 KH domain protein 48758 48988 1
CDS rimM ZP_07400113.1 HMPREF9225_1459 16S rRNA processing protein RimM 48978 49472 1
CDS trmD ZP_07400114.1 HMPREF9225_1460 tRNA (guanine-N1)-methyltransferase 49472 50170 1
CDS rplS ZP_07400115.1 HMPREF9225_1461 50S ribosomal protein L19 50171 50518 1
CDS - ZP_07400116.1 HMPREF9225_1462 glycoside hydrolase family 18 50609 52258 1
CDS - ZP_07400117.1 HMPREF9225_1463 hypothetical protein 52255 52935 1
CDS asnA ZP_07400118.1 HMPREF9225_1464 aspartate-ammonia ligase 52982 53980 1
CDS - ZP_07400119.1 HMPREF9225_1465 hypothetical protein 54077 54853 1
CDS ruvC ZP_07400120.1 HMPREF9225_1466 crossover junction endoribonuclease subunit C 54921 55415 1
CDS ruvA ZP_07400121.1 HMPREF9225_1467 crossover junction ATP-dependent DNA helicase RuvA 55412 55993 1
CDS ruvB ZP_07400122.1 HMPREF9225_1468 crossover junction ATP-dependent DNA helicase RuvB 55996 57012 1
CDS - ZP_07400123.1 HMPREF9225_1469 hypothetical protein 57009 58103 1
CDS queA ZP_07400124.1 HMPREF9225_1470 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 58100 59128 1
CDS tgt ZP_07400125.1 HMPREF9225_1471 tRNA-guanine transglycosylase 59128 60243 1
CDS - ZP_07400126.1 HMPREF9225_1472 hypothetical protein 60288 61217 -1
CDS - ZP_07400127.1 HMPREF9225_1473 phosphoribosylaminoimidazole carboxylase catalytic subunit 61316 62071 1
CDS - ZP_07400128.1 HMPREF9225_1474 PP-loop family protein 62061 62876 1
CDS - ZP_07400129.1 HMPREF9225_1475 protein of hypothetical function DUF111 62880 64163 1
CDS lexA ZP_07400130.1 HMPREF9225_1476 repressor LexA 64210 64827 -1
CDS - ZP_07400131.1 HMPREF9225_1477 hypothetical protein 65042 65335 1
CDS rho ZP_07400132.1 HMPREF9225_1478 transcription termination factor Rho 65519 67183 -1
CDS glpX ZP_07400133.1 HMPREF9225_1479 fructose-1,6-bisphosphatase 67183 68151 -1
CDS tal ZP_07400134.1 HMPREF9225_1480 transaldolase 68151 68804 -1
CDS ispF ZP_07400135.1 HMPREF9225_1481 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 68801 69289 -1
CDS ispD ZP_07400136.1 HMPREF9225_1482 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 69303 70004 -1
CDS ftsI ZP_07400137.1 HMPREF9225_1483 cell division protein FtsI/penicillin-binding protein 2 70006 71424 -1
CDS ftsW2 ZP_07400138.1 HMPREF9225_1484 bacterial cell division membrane protein 71431 72684 -1
CDS - ZP_07400139.1 HMPREF9225_1485 FHA domain protein 72688 73125 -1
CDS - ZP_07400140.1 HMPREF9225_1486 hypothetical protein 73277 73876 1
CDS - ZP_07400141.1 HMPREF9225_1487 endo/excinuclease amino domain protein 73869 74132 1
CDS ccdA ZP_07400142.1 HMPREF9225_1488 cytochrome c biogenesis protein CcdA 74169 74480 -1
CDS - ZP_07400143.1 HMPREF9225_1489 hypothetical protein 74461 75840 -1
CDS - ZP_07400144.1 HMPREF9225_1490 sensor histidine kinase 75877 77283 -1
CDS - ZP_07400145.1 HMPREF9225_1491 response regulator 77270 77965 -1
CDS - ZP_07400146.1 HMPREF9225_1492 MATE efflux family protein 78231 79625 1
CDS guaB ZP_07400147.1 HMPREF9225_1493 inosine-5'-monophosphate dehydrogenase 79710 81161 -1
CDS - ZP_07400148.1 HMPREF9225_1494 hypothetical protein 81171 82121 -1
CDS - ZP_07400149.1 HMPREF9225_1495 protein of hypothetical function DUF147 82114 82956 -1
CDS - ZP_07400150.1 HMPREF9225_1496 hypothetical protein 82959 83483 -1
CDS folD ZP_07400151.1 HMPREF9225_1497 bifunctional methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase 83526 84356 -1
CDS ispH ZP_07400152.1 HMPREF9225_1498 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 84405 86420 -1
CDS plsC ZP_07400153.1 HMPREF9225_1499 1-acyl-sn-glycerol-3-phosphate acyltransferase 86421 86990 -1
CDS cmk ZP_07400154.1 HMPREF9225_1500 cytidylate kinase 86991 87623 -1
CDS - ZP_07400155.1 HMPREF9225_1501 pyridine nucleotide-disulfide oxidoreductase 87620 88822 -1
CDS - ZP_07400156.1 HMPREF9225_1502 rRNA methyltransferase 88819 89364 -1
CDS rluB ZP_07400157.1 HMPREF9225_1503 ribosomal large subunit pseudouridine synthase B 89361 90065 -1
CDS scpB ZP_07400158.1 HMPREF9225_1504 segregation and condensation protein B 90062 90601 -1
CDS scpA ZP_07400159.1 HMPREF9225_1505 segregation and condensation protein A 90603 91313 -1
CDS spoIVFB ZP_07400160.1 HMPREF9225_1506 M50 family peptidase 91292 91939 -1
CDS pyn ZP_07400161.1 HMPREF9225_1507 pyrimidine-nucleoside phosphorylase 91939 93243 -1
CDS punA ZP_07400162.1 HMPREF9225_1508 purine-nucleoside phosphorylase 93245 94045 -1
CDS nudF ZP_07400163.1 HMPREF9225_1509 ADP-ribose diphosphatase 94045 94581 -1
CDS recN ZP_07400164.1 HMPREF9225_1510 DNA repair protein RecN 94583 96247 -1
CDS tlyA ZP_07400165.1 HMPREF9225_1511 hemolysin A 96251 97048 -1
CDS ispA ZP_07400166.1 HMPREF9225_1512 geranyltranstransferase 97048 97917 -1