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Peptoniphilus duerdenii ATCC BAA-1640 contig00060, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_07400185.1 HMPREF9225_1531 tetracycline resistance determinant leader peptide 1 96 -1
CDS - ZP_07400186.1 HMPREF9225_1532 conjugative transposon protein 341 1276 -1
CDS - ZP_07400187.1 HMPREF9225_1533 NLP/P60 family protein 1273 2274 -1
CDS - ZP_07400188.1 HMPREF9225_1534 conjugative transposon membrane protein 2271 4448 -1
CDS - ZP_07400189.1 HMPREF9225_1535 conjugative transposon protein 4451 6898 -1
CDS - ZP_07400190.1 HMPREF9225_1536 conjugative transposon membrane protein 6882 7313 -1
CDS - ZP_07400191.1 HMPREF9225_1537 antirestriction protein 7288 7785 -1
CDS - ZP_07400192.1 HMPREF9225_1538 hypothetical protein 7902 8123 -1
CDS - ZP_07400193.1 HMPREF9225_1539 cro/CI family transcriptional regulator 8166 9341 -1
CDS - ZP_07400194.1 HMPREF9225_1540 FtsK/SpoIIIE family protein 9547 10941 -1
CDS - ZP_07400195.1 HMPREF9225_1541 conjugative transposon protein 10981 11367 -1
CDS - ZP_07400196.1 HMPREF9225_1542 conjugative transposon protein 11383 11697 -1
CDS - ZP_07400197.1 HMPREF9225_1543 brp/Blh family beta-carotene 15,15'-monooxygenase 12061 13803 -1
CDS glpK ZP_07400198.1 HMPREF9225_1544 glycerol kinase 13890 15389 -1
CDS truA ZP_07400199.1 HMPREF9225_1545 tRNA pseudouridine synthase A 15386 16129 -1
CDS - ZP_07400200.1 HMPREF9225_1546 cobalt (Co2+) ABC superfamily ATP binding cassette transporter, membrane protein 16132 16935 -1
CDS - ZP_07400201.1 HMPREF9225_1547 ABC superfamily ATP binding cassette transporter, ABC protein 16928 17782 -1
CDS - ZP_07400202.1 HMPREF9225_1548 ABC superfamily ATP binding cassette transporter, ABC protein 17764 18582 -1
CDS pyrE ZP_07400203.1 HMPREF9225_1549 orotate phosphoribosyltransferase 18676 19305 -1
CDS pyrF ZP_07400204.1 HMPREF9225_1550 orotidine 5'-phosphate decarboxylase 19302 19988 -1
CDS - ZP_07400205.1 HMPREF9225_1551 ABC superfamily ATP binding cassette transporter, permease protein 20061 20882 -1
CDS - ZP_07400206.1 HMPREF9225_1552 hypothetical protein 20882 22126 -1
CDS alaS ZP_07400207.1 HMPREF9225_1553 alanine--tRNA ligase 22308 24932 -1
CDS - ZP_07400208.1 HMPREF9225_1554 hypothetical protein 24974 26221 -1
CDS iscS2 ZP_07400209.1 HMPREF9225_1555 cysteine desulfurase 26225 27298 -1
CDS iscR ZP_07400210.1 HMPREF9225_1556 iron-sulfur cluster assembly transcription regulator IscR 27295 27690 -1
CDS - ZP_07400211.1 HMPREF9225_1557 NifU family SUF system FeS assembly protein 27699 28154 -1
CDS sufS ZP_07400212.1 HMPREF9225_1558 cysteine desulfurase SufS 28144 29373 -1
CDS sufB ZP_07400213.1 HMPREF9225_1559 iron-regulated ABC superfamily ATP binding cassette transporter membrane component 29366 30412 -1
CDS sufB2 ZP_07400214.1 HMPREF9225_1560 ABC superfamily ATP binding cassette transporter, membrane protein 30422 31843 -1
CDS - ZP_07400215.1 HMPREF9225_1561 ABC superfamily ATP binding cassette transporter, ABC protein 31836 32591 -1
CDS - ZP_07400216.1 HMPREF9225_1562 integral membrane protein 32703 33347 -1
CDS - ZP_07400217.1 HMPREF9225_1563 possible histidine kinase 33400 34263 -1
CDS - ZP_07400218.1 HMPREF9225_1564 ABC superfamily ATP binding cassette transporter permease subunit 34260 35063 -1
CDS - ZP_07400219.1 HMPREF9225_1565 possible bacitracin ABC ATP binding cassette transporter, ABC protein 35056 35976 -1
CDS vanR ZP_07400220.1 HMPREF9225_1566 response regulator VanR 36045 36728 -1
CDS thiE ZP_07400221.1 HMPREF9225_1567 thiamine-phosphate diphosphorylase 36753 37388 -1
CDS thiM ZP_07400222.1 HMPREF9225_1568 hydroxyethylthiazole kinase 37375 38184 -1
CDS thiW ZP_07400223.1 HMPREF9225_1569 hydroxyethylthiazole permease 38159 38671 -1
CDS tktA ZP_07400224.1 HMPREF9225_1570 transketolase 39052 41001 -1
CDS tagA ZP_07400225.1 HMPREF9225_1571 UDP-N-acetyl-D-mannosamine transferase 40998 41789 -1
CDS csaB ZP_07400226.1 HMPREF9225_1572 polysaccharide pyruvyl transferase CsaB 41773 42867 -1
CDS - ZP_07400227.1 HMPREF9225_1573 hypothetical protein 42857 44938 -1
CDS - ZP_07400228.1 HMPREF9225_1574 cell surface protein 45162 45341 -1
CDS fprA2 ZP_07400229.1 HMPREF9225_1575 flavodoxin 45429 46679 -1
CDS bcd2 ZP_07400230.1 HMPREF9225_1576 butyryl-CoA dehydrogenase 46697 48955 -1
CDS - ZP_07400231.1 HMPREF9225_1577 hypothetical protein 49159 49809 -1
CDS - ZP_07400232.1 HMPREF9225_1578 hypothetical protein 49811 50047 -1
CDS - ZP_07400233.1 HMPREF9225_1579 SMC protein family protein 50044 51351 -1
CDS - ZP_07400234.1 HMPREF9225_1580 Ser/Thr protein phosphatase 51348 52328 -1
CDS recA ZP_07400235.1 HMPREF9225_1581 recombination protein A 52328 53395 -1
CDS - ZP_07400236.1 HMPREF9225_1582 possible competence damage-inducible protein A 53397 54602 -1
CDS pgsA ZP_07400237.1 HMPREF9225_1583 CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase 54589 55122 -1
CDS yliG ZP_07400238.1 HMPREF9225_1584 MiaB family RNA modification enzyme 55106 56440 -1
CDS ftsK ZP_07400239.1 HMPREF9225_1585 DNA translocase FtsK 56433 58826 -1
CDS - ZP_07400240.1 HMPREF9225_1586 hypothetical protein 60949 61158 1
CDS - ZP_07400241.1 HMPREF9225_1587 3'-5' exonuclease and CRISPR-associated Cas2 family protein 61471 62361 -1
CDS cas1-2 ZP_07400242.1 HMPREF9225_1588 CRISPR-associated protein cas1 62364 63308 -1
CDS cse3 ZP_07400243.1 HMPREF9225_1589 cse3 family CRISPR-associated protein 63305 63943 -1
CDS cas5e ZP_07400244.1 HMPREF9225_1590 CRISPR-associated protein cas5 63952 64650 -1
CDS cse4 ZP_07400245.1 HMPREF9225_1591 cse4 family CRISPR-associated protein 64643 65722 -1
CDS cse2 ZP_07400246.1 HMPREF9225_1592 cse2 family CRISPR-associated protein 65715 66314 -1
CDS cse1 ZP_07400247.1 HMPREF9225_1593 cse1 family CRISPR-associated protein 66298 68028 -1
CDS cas3 ZP_07400248.1 HMPREF9225_1594 CRISPR-associated helicase cas3 68032 70779 -1
CDS - ZP_07400249.1 HMPREF9225_1595 HD domain protein 71137 71715 -1
CDS ppaC ZP_07400250.1 HMPREF9225_1596 possible inorganic diphosphatase 71729 73363 -1
CDS - ZP_07400251.1 HMPREF9225_1597 metallo-beta-lactamase 73363 74001 -1
CDS dtd ZP_07400252.1 HMPREF9225_1598 D-tyrosyl-tRNA(Tyr) deacylase 74002 74451 -1
CDS relA ZP_07400253.1 HMPREF9225_1599 GTP diphosphokinase 74451 76592 -1
CDS recJ ZP_07400254.1 HMPREF9225_1600 single-stranded-DNA-specific exonuclease RecJ 76601 78337 -1
CDS rnpA2 ZP_07400255.1 HMPREF9225_1601 ribonuclease PH/Ham1 protein 78477 79784 -1
CDS amiD ZP_07400256.1 HMPREF9225_1602 N-acetylmuramoyl-L-alanine amidase 79774 81120 -1
CDS hypE ZP_07400257.1 HMPREF9225_1603 hydrogenase maturation factor 81098 82081 -1
CDS - ZP_07400258.1 HMPREF9225_1604 hypothetical protein 82078 83367 -1
CDS xpsO ZP_07400259.1 HMPREF9225_1605 possible prepilin peptidase 83355 84065 -1
CDS - ZP_07400260.1 HMPREF9225_1606 hypothetical protein 84062 84409 -1
CDS - ZP_07400261.1 HMPREF9225_1607 possible type II secretion system protein 84423 85589 -1
CDS gspE ZP_07400262.1 HMPREF9225_1608 type II general secretion pathway (GSP) E protein 85591 87015 -1
CDS topA ZP_07400263.1 HMPREF9225_1609 DNA topoisomerase TopA 87021 89084 -1
CDS drpA ZP_07400264.1 HMPREF9225_1610 DNA processing protein DprA 89093 90181 -1
CDS comM ZP_07400265.1 HMPREF9225_1611 Mg chelatase-like protein 90181 91701 -1
CDS - ZP_07400266.1 HMPREF9225_1612 possible endonuclease 91710 92063 -1
CDS rnhB ZP_07400267.1 HMPREF9225_1613 ribonuclease HII 92060 92671 -1
CDS ylqF ZP_07400268.1 HMPREF9225_1614 ribosome biogenesis GTP-binding protein YlqF 92664 93509 -1
CDS - ZP_07400269.1 HMPREF9225_1615 HAD superfamily hydrolase 93494 94300 -1
CDS - ZP_07400270.1 HMPREF9225_1616 Asp/Glu/Hydantoin family racemase 94634 95281 -1
CDS ychF ZP_07400271.1 HMPREF9225_1617 GTP-binding protein YchF 95423 96517 1
tRNA - - HMPREF9225_t0013 tRNA-His 96592 96668 1
CDS - ZP_07400272.1 HMPREF9225_1618 hypothetical protein 96866 97183 -1
CDS - ZP_07400273.1 HMPREF9225_1619 hypothetical protein 97170 97556 -1
CDS amiD2 ZP_07400274.1 HMPREF9225_1620 N-acetylmuramoyl-L-alanine amidase 97558 98289 -1
CDS accA ZP_07400275.1 HMPREF9225_1621 acetyl-coA carboxylase carboxyl transferase subunit alpha 98312 98635 -1
CDS - ZP_07400276.1 HMPREF9225_1622 hypothetical protein 98735 98971 -1
CDS - ZP_07400277.1 HMPREF9225_1623 hypothetical protein 99069 99386 -1
CDS - ZP_07400278.1 HMPREF9225_1624 hyaluronoglucosaminidase 99395 100120 -1
CDS - ZP_07400279.1 HMPREF9225_1625 hypothetical protein 100123 100269 -1
CDS - ZP_07400280.1 HMPREF9225_1626 hypothetical protein 100269 100424 -1
CDS - ZP_07400281.1 HMPREF9225_1627 phage shock protein A 100424 100660 -1
CDS - ZP_07400282.1 HMPREF9225_1628 hypothetical protein 100657 102360 -1
CDS - ZP_07400283.1 HMPREF9225_1629 hypothetical protein 102360 103469 -1