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Peptoniphilus duerdenii ATCC BAA-1640 contig00062, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_07400369.1 HMPREF9225_1715 hypothetical protein 45 1139 -1
CDS - ZP_07400370.1 HMPREF9225_1716 hypothetical protein 1136 1900 -1
CDS argS ZP_07400371.1 HMPREF9225_1717 arginine--tRNA ligase 1971 3680 -1
CDS mutS2 ZP_07400372.1 HMPREF9225_1718 DNA mismatch repair protein MutS 3689 6049 -1
CDS - ZP_07400373.1 HMPREF9225_1719 U32 family peptidase 6046 8346 -1
CDS zapA ZP_07400374.1 HMPREF9225_1720 cell division protein ZapA 8336 8878 -1
CDS pheT ZP_07400375.1 HMPREF9225_1721 phenylalanyl-tRNA synthetase beta subunit 8875 11259 -1
CDS pheS ZP_07400376.1 HMPREF9225_1722 phenylalanyl-tRNA synthetase alpha subunit 11268 12290 -1
CDS - ZP_07400377.1 HMPREF9225_1723 possible nucleoside deoxyribosyltransferase 12361 12867 1
tRNA - - HMPREF9225_t0016 tRNA-Cys 12934 13007 -1
CDS pepS ZP_07400378.1 HMPREF9225_1724 aminopeptidase PepS 13065 14291 -1
CDS deoD ZP_07400379.1 HMPREF9225_1725 purine nucleoside phosphorylase 14366 15073 1
CDS comEA ZP_07400380.1 HMPREF9225_1726 competence protein comEA 15060 15641 1
tRNA - - HMPREF9225_t0017 tRNA-Trp 15690 15764 1
CDS aslB ZP_07400381.1 HMPREF9225_1727 radical SAM domain protein 15862 17217 -1
CDS - ZP_07400382.1 HMPREF9225_1728 MATE efflux family protein 17336 18688 -1
CDS - ZP_07400383.1 HMPREF9225_1729 P-II family regulatory protein 18678 19310 -1
CDS - ZP_07400384.1 HMPREF9225_1730 hypothetical protein 19303 20766 -1
CDS - ZP_07400385.1 HMPREF9225_1731 hypothetical protein 20759 21478 -1
CDS - ZP_07400386.1 HMPREF9225_1732 possible deacetylase 21481 23331 -1
CDS - ZP_07400387.1 HMPREF9225_1733 possible alginate O-acetylation protein 23336 24937 -1
CDS dltC ZP_07400388.1 HMPREF9225_1734 D-alanine-poly(phosphoribitol) ligase subunit 2 24937 25167 -1
CDS paiA ZP_07400389.1 HMPREF9225_1735 GNAT family acetyltransferase 25170 25952 -1
CDS dltA ZP_07400390.1 HMPREF9225_1736 D-alanine--D-alanyl carrier protein ligase subunit 1 25912 27396 -1
CDS coaE ZP_07400391.1 HMPREF9225_1737 dephospho-CoA kinase 27393 27986 -1
CDS polA ZP_07400392.1 HMPREF9225_1738 DNA-directed DNA polymerase I 27973 30621 -1
tRNA - - HMPREF9225_t0018 tRNA-Leu 30722 30808 1
CDS fliE2 ZP_07400393.1 HMPREF9225_1739 flagellar hook-basal body complex protein 31265 31441 1
CDS udk ZP_07400394.1 HMPREF9225_1740 uridine kinase 31564 32193 -1
CDS yegQ ZP_07400395.1 HMPREF9225_1741 U32 family peptidase 32190 33416 -1
CDS - ZP_07400396.1 HMPREF9225_1742 O-methyltransferase 33403 34056 -1
CDS - ZP_07400397.1 HMPREF9225_1743 metallo-beta-lactamase 34083 35774 -1
CDS fur2 ZP_07400398.1 HMPREF9225_1744 ferric uptake regulation protein 35737 36210 -1
CDS - ZP_07400399.1 HMPREF9225_1745 hypothetical protein 36188 36436 -1
CDS - ZP_07400400.1 HMPREF9225_1746 crossover junction endodeoxyribonuclease 36429 36854 -1
CDS - ZP_07400401.1 HMPREF9225_1747 protein of hypothetical function DUF965 36885 37163 -1
CDS nifJ ZP_07400402.1 HMPREF9225_1748 pyruvate:ferredoxin oxidoreductase 37340 40882 -1
CDS - ZP_07400403.1 HMPREF9225_1749 hypothetical protein 41202 41858 -1
CDS - ZP_07400404.1 HMPREF9225_1750 hypothetical protein 41964 46790 -1
CDS - ZP_07400405.1 HMPREF9225_1751 thioredoxin family protein 47064 48212 1
CDS - ZP_07400406.1 HMPREF9225_1752 thioredoxin family protein 48223 48372 1
CDS - ZP_07400407.1 HMPREF9225_1753 iron-sulfur cluster-binding protein 48365 49255 1
CDS vncR ZP_07400408.1 HMPREF9225_1754 DNA-binding response regulator 49289 50035 1
CDS vncS ZP_07400409.1 HMPREF9225_1755 sensor histidine kinase VncS 50032 51348 1
CDS - ZP_07400410.1 HMPREF9225_1756 hypothetical protein 51359 51925 1
CDS - ZP_07400411.1 HMPREF9225_1757 transmembrane CAAX amino protease 51985 52791 -1
CDS - ZP_07400412.1 HMPREF9225_1758 hypothetical protein 52748 52927 1
CDS nit2 ZP_07400413.1 HMPREF9225_1759 nitrilase 52942 53862 -1
CDS hsdR ZP_07400414.1 HMPREF9225_1760 HsdR family type I site-specific deoxyribonuclease 54087 57107 -1
CDS hsdS ZP_07400415.1 HMPREF9225_1761 type I restriction-modification system specificity determinant 57120 57731 -1
CDS hsdS2 ZP_07400416.1 HMPREF9225_1762 type I restriction-modification enzyme s subunit 57758 58909 -1
CDS hsdM ZP_07400417.1 HMPREF9225_1763 type I restriction-modification system DNA-methyltransferase 58902 60488 -1
CDS entB2 ZP_07400418.1 HMPREF9225_1764 isochorismatase transposase 60679 61230 -1
CDS lacC ZP_07400419.1 HMPREF9225_1765 tagatose-6-phosphate kinase 61227 62168 -1
CDS pgm ZP_07400420.1 HMPREF9225_1766 phosphoglucomutase 62179 63858 -1
CDS ybaK ZP_07400421.1 HMPREF9225_1767 YbaK/ebsC protein 63868 64335 -1
CDS - ZP_07400422.1 HMPREF9225_1768 ABC superfamily ATP binding cassette transporter, membrane protein 64341 65147 -1
CDS - ZP_07400423.1 HMPREF9225_1769 ABC superfamily ATP binding cassette transporter, ABC protein 65144 65791 -1
CDS adcA ZP_07400424.1 HMPREF9225_1770 zinc ABC superfamily ATP binding cassette transporter, binding protein 65829 66938 -1
CDS rpmB ZP_07400425.1 HMPREF9225_1771 50S ribosomal protein L28 67231 67422 1
CDS - ZP_07400426.1 HMPREF9225_1772 GNAT family acetyltransferase 67571 68065 -1
CDS hydC ZP_07400427.1 HMPREF9225_1773 ferredoxin hydrogenase 68117 69850 -1
CDS sfrB ZP_07400428.1 HMPREF9225_1774 Fe(III) reductase 69844 71676 -1
CDS - ZP_07400429.1 HMPREF9225_1775 stage V sporulation protein G 71951 72244 -1
CDS murC ZP_07400430.1 HMPREF9225_1776 UDP-N-acetylmuramate--L-alanine ligase 72374 73762 1
CDS - ZP_07400431.1 HMPREF9225_1777 rhodanese domain protein 73998 74504 1
CDS gatB ZP_07400432.1 HMPREF9225_1778 glutamyl-tRNA(Gln) amidotransferase subunit B 74669 76099 -1
CDS gatA ZP_07400433.1 HMPREF9225_1779 glutamyl-tRNA(Gln) amidotransferase subunit A 76089 77504 -1
CDS gatC ZP_07400434.1 HMPREF9225_1780 glutamyl-tRNA(Gln) amidotransferase subunit C 77512 77793 -1
CDS ligA ZP_07400435.1 HMPREF9225_1781 NAD-dependent DNA ligase LigA 77790 79742 -1
CDS pcrA ZP_07400436.1 HMPREF9225_1782 ATP-dependent DNA helicase PcrA 79735 81924 -1
CDS - ZP_07400437.1 HMPREF9225_1783 ThiF family protein 81921 82601 -1
CDS - ZP_07400438.1 HMPREF9225_1784 hypothetical protein 82598 83671 -1
CDS - ZP_07400439.1 HMPREF9225_1785 hypothetical protein 83737 85638 -1
CDS - ZP_07400440.1 HMPREF9225_1786 hypothetical protein 85771 86478 1
CDS - ZP_07400441.1 HMPREF9225_1787 GNAT family acetyltransferase 87191 87697 -1
CDS - ZP_07400442.1 HMPREF9225_1788 hypothetical protein 87735 88208 -1
CDS - ZP_07400443.1 HMPREF9225_1789 hypothetical protein 88220 90199 -1
CDS cls ZP_07400444.1 HMPREF9225_1790 cardiolipin synthetase 90525 92117 -1
CDS pepQ ZP_07400445.1 HMPREF9225_1791 xaa-Pro dipeptidase 92120 93175 -1
CDS - ZP_07400446.1 HMPREF9225_1792 peptide binding protein 93172 93465 -1
CDS - ZP_07400447.1 HMPREF9225_1793 peptidase M16C family protein 93529 96411 1