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Photobacterium damselae subsp. damselae CIP 102761, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_06157819.1 VDA_000090 hypothetical protein 1270 2112 1
CDS - ZP_06157820.1 VDA_000091 peyer's patch-specific virulence factor GipA (transposase) 4167 5018 -1
CDS - ZP_06157821.1 VDA_000092 chromosome (plasmid) partitioning protein ParA 9687 10934 1
CDS - ZP_06157822.1 VDA_000093 chromosome (plasmid) partitioning protein ParB 10936 11895 1
CDS - ZP_06157823.1 VDA_000094 hypothetical protein 12015 13094 -1
CDS - ZP_06157824.1 VDA_000095 fimbrial protein precursor 14062 14271 1
CDS - ZP_06157825.1 VDA_000096 flp pilus assembly protein RcpC/CpaB 14748 15551 1
CDS - ZP_06157826.1 VDA_000097 type II/IV secretion system secretin RcpA/CpaC associated with Flp pilus assembly 15560 16888 1
CDS - ZP_06157827.1 VDA_000098 type II/IV secretion system ATPase TadZ/CpaE associated with Flp pilus assembly 17394 18623 1
CDS - ZP_06157828.1 VDA_000099 type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF TadA subfamily 18627 19907 1
CDS - ZP_06157829.1 VDA_000100 flp pilus assembly protein TadB 19907 20827 1
CDS - ZP_06157830.1 VDA_000101 type II/IV secretion system protein TadC associated with Flp pilus assembly 20830 21711 1
CDS - ZP_06157831.1 VDA_000102 Flp pilus assembly protein TadD 21704 22432 1
CDS - ZP_06157832.1 VDA_000103 protein TadG associated with Flp pilus assembly 23500 24810 1
CDS - ZP_06157833.1 VDA_000104 lipoprotein precursor OmpA family 24839 25471 1
CDS - ZP_06157834.1 VDA_000105 site-specific recombinase resolvase family 26447 27124 1
CDS - ZP_06157835.1 VDA_000106 hypothetical protein 27466 28092 -1
CDS - ZP_06157836.1 VDA_000107 hypothetical membrane spanning protein 28910 30589 1
CDS - ZP_06157837.1 VDA_000108 hypothetical protein 31477 32313 -1
CDS - ZP_06157838.1 VDA_000109 phosphoenolpyruvate synthase 32641 35001 1
CDS - ZP_06157839.1 VDA_000110 quinoprotein amine dehydrogenase beta chain 35944 37407 -1
CDS - ZP_06157840.1 VDA_000111 TonB-dependent hemin ferrichrome receptor 37431 39671 -1
CDS - ZP_06157841.1 VDA_000112 hypothetical protein 41431 42408 1
CDS - ZP_06157842.1 VDA_000113 outer membrane protein OmpU 45191 46117 1
CDS - ZP_06157843.1 VDA_000114 hypothetical protein 49641 50429 1
CDS - ZP_06157844.1 VDA_000115 hypothetical protein 52263 52457 1
CDS - ZP_06157845.1 VDA_000116 hypothetical intracellular protease/amidase 53779 54375 -1
CDS - ZP_06157846.1 VDA_000117 predicted manganese transporter 11 TMS 55204 56415 1
CDS - ZP_06157847.1 VDA_000118 hypothetical protein 56472 57044 -1
CDS - ZP_06157848.1 VDA_000119 hypothetical protein 57178 57654 -1
CDS - ZP_06157849.1 VDA_000120 hypothetical protein 61021 61560 1
CDS - ZP_06157850.1 VDA_000121 hypothetical protein 62294 63106 -1
CDS - ZP_06157851.1 VDA_000122 Riorf46 protein 63691 65055 1
CDS - ZP_06157852.1 VDA_000123 hypothetical protein 66567 66893 1
CDS - ZP_06157853.1 VDA_000124 IncF plasmid conjugative transfer pilus assembly protein TraK 67812 68513 1
CDS - ZP_06157854.1 VDA_000125 hypothetical protein 68510 68683 -1
CDS - ZP_06157855.1 VDA_000126 IncF plasmid conjugative transfer pilus assembly protein TraB 68634 70007 1
CDS - ZP_06157856.1 VDA_000127 putative sex pilus assembly and synthesis protein TraC 70442 73027 1
CDS - ZP_06157857.1 VDA_000128 IncF plasmid conjugative transfer pilus assembly protein TraW 73664 74353 1
CDS - ZP_06157858.1 VDA_000129 hypothetical protein 74823 74942 -1
CDS - ZP_06157859.1 VDA_000130 hypothetical protein 76031 76153 1
CDS - ZP_06157860.1 VDA_000131 IncF plasmid conjugative transfer pilus assembly protein TraU 76756 77796 1
CDS - ZP_06157861.1 VDA_000132 conjugative transfer protein TrbC 78136 78783 1
CDS - ZP_06157862.1 VDA_000133 IncF plasmid conjugative transfer protein TraN 78780 80612 1
CDS - ZP_06157863.1 VDA_000134 IncF plasmid conjugative transfer pilus assembly protein TraF 80609 81367 1
CDS - ZP_06157864.1 VDA_000135 IncF plasmid conjugative transfer pilus assembly protein TraH 82130 83503 1
CDS - ZP_06157865.1 VDA_000136 IncF plasmid conjugative transfer protein TraG 83506 85998 1
CDS - ZP_06157866.1 VDA_000137 IncF plasmid conjugative transfer protein TraD 86739 88874 1
CDS - ZP_06157867.1 VDA_000138 IncF plasmid conjugative transfer DNA-nicking and unwinding protein TraI 89394 95336 1
CDS - ZP_06157868.1 VDA_000139 hypothetical protein 98199 98744 -1
CDS - ZP_06157869.1 VDA_000140 transposase 99365 100174 -1
CDS - ZP_06157870.1 VDA_000141 peyer's patch-specific virulence factor GipA (transposase) 100688 101785 -1
CDS - ZP_06157871.1 VDA_000142 mfp1 (mar binding filament-like protein 1) 102903 103847 -1
CDS - ZP_06157872.1 VDA_000143 DNA-binding protein H-NS 104005 104391 1
CDS - ZP_06157873.1 VDA_000144 acetate/propionate kinase 104794 105561 -1
CDS - ZP_06157874.1 VDA_000145 hypothetical protein 106529 107125 -1
CDS - ZP_06157875.1 VDA_000146 ISSod13 transposase 111623 112141 1
CDS - ZP_06157876.1 VDA_000147 hypothetical protein 112821 113459 -1
CDS - ZP_06157877.1 VDA_000148 Rhs family protein 113462 120367 -1
CDS - ZP_06157878.1 VDA_000149 hypothetical protein 124667 125179 -1
CDS - ZP_06157879.1 VDA_000150 DNA-binding protein H-NS 125988 126371 1
CDS - ZP_06157880.1 VDA_000151 hypothetical protein 127236 128339 -1
CDS - ZP_06157881.1 VDA_000152 chromosome segregation ATPase 129247 129846 1
CDS - ZP_06157882.1 VDA_000153 chromosome segregation ATPase 130424 131017 1
CDS - ZP_06157883.1 VDA_000154 ABC-type antimicrobial peptide transport system ATPase component 132131 132823 -1
CDS - ZP_06157884.1 VDA_000155 ABC-type antimicrobial peptide transport system permease component 132843 134126 -1
CDS - ZP_06157885.1 VDA_000156 ABC-type antimicrobial peptide transport system permease component 134129 135343 -1
CDS - ZP_06157886.1 VDA_000157 outer membrane protein 135340 136611 -1
CDS - ZP_06157887.1 VDA_000158 membrane-fusion protein 136604 137740 -1
CDS - ZP_06157888.1 VDA_000159 hemolysin-1 138631 140352 1
CDS - ZP_06157889.1 VDA_000160 cytolysin and hemolysin HlyA Pore-forming toxin 140956 142767 -1
CDS - ZP_06157890.1 VDA_000161 hypothetical protein 144232 145938 -1
CDS - ZP_06157891.1 VDA_000162 hypothetical protein 145992 147062 -1