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Photobacterium profundum 3TCK, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_01217586.1 P3TCK_02361 hypothetical transport protein 1 1185 -1
CDS - ZP_01217587.1 P3TCK_02366 hypothetical protein 1341 1481 -1
CDS - ZP_01217588.1 P3TCK_02371 hypothetical methyl-accepting chemotaxis protein 1826 3229 1
CDS - ZP_01217589.1 P3TCK_02376 hypothetical protein 3340 3789 -1
CDS - ZP_01217590.1 P3TCK_02381 hypothetical chemotaxis transducer 4161 6158 1
CDS - ZP_01217591.1 P3TCK_02386 hypothetical methyl-accepting chemotaxis protein 6290 8023 -1
CDS - ZP_01217592.1 P3TCK_02391 putative galactoside ABC transporter, permease protein 8099 9109 -1
CDS - ZP_01217593.1 P3TCK_02396 putative galactoside ABC transporter, ATP-binding protein 9122 10597 -1
CDS - ZP_01217594.1 P3TCK_02401 putative galactoside ABC transporter, periplasmic D-galactose/D-glucose-binding protein 10700 11677 -1
CDS - ZP_01217595.1 P3TCK_02406 putative acyl-CoA thioester hydrolase 12511 12996 1
CDS - ZP_01217596.1 P3TCK_02411 mannonate dehydratase 13123 14307 -1
CDS - ZP_01217597.1 P3TCK_02416 putative transcriptional regulatory protein 14469 15257 -1
CDS - ZP_01217598.1 P3TCK_02421 putative dicarboxylate-binding periplasmic protein 15360 16343 -1
CDS - ZP_01217599.1 P3TCK_02426 putative small integral C4-dicarboxylate membrane transport protein 16644 17153 1
CDS - ZP_01217600.1 P3TCK_02431 C4-dicarboxylate transport system, putative integral membrane protein 17179 18480 1
CDS - ZP_01217601.1 P3TCK_02436 putative mannonate oxidoreductase 18563 20026 1
CDS - ZP_01217602.1 P3TCK_02441 uronate isomerase 20085 21509 1
CDS - ZP_01217603.1 P3TCK_02446 hypothetical carbohydrate kinase 21506 22477 1
CDS - ZP_01217604.1 P3TCK_02451 putative 4-hydroxy-2-oxoglutaratealdolase/2-deydro-3- deoxyphosphogluconate aldolase 22491 23117 1
CDS - ZP_01217605.1 P3TCK_02456 hypothetical protein 23229 23921 1
CDS - ZP_01217606.1 P3TCK_02461 hypothetical protein 23914 24420 1
CDS - ZP_01217607.1 P3TCK_02466 hypothetical protein 24567 24947 -1
CDS - ZP_01217608.1 P3TCK_02471 hypothetical protein 24956 25423 -1
CDS - ZP_01217609.1 P3TCK_02476 Beta-glucosidase 25629 27887 -1
CDS - ZP_01217610.1 P3TCK_02481 hypothetical cytosolic protein 28765 29616 1
CDS - ZP_01217611.1 P3TCK_02486 hypothetical protein 29619 29741 -1
CDS - ZP_01217612.1 P3TCK_02491 putative C4-dicarboxylate transport protein 29922 31325 -1
CDS - ZP_01217613.1 P3TCK_02496 hypothetical C4-dicarboxylate transport system, small permease component 31328 31888 -1
CDS - ZP_01217614.1 P3TCK_02501 putative C4-dicarboxylate-binding periplasmic protein 31946 32932 -1
CDS - ZP_01217615.1 P3TCK_02506 hypothetical protein 33329 33937 -1
CDS - ZP_01217616.1 P3TCK_02511 hypothetical transcriptional regulator 34033 34938 1
CDS - ZP_01217617.1 P3TCK_02516 hypothetical protein 35028 37010 -1
CDS - ZP_01217618.1 P3TCK_02521 hypothetical protein 37338 38000 1
CDS - ZP_01217619.1 P3TCK_02526 hypothetical protein 38209 41178 1
CDS - ZP_01217620.1 P3TCK_02531 Short-chain fatty acids transporter 41298 42677 -1
CDS - ZP_01217621.1 P3TCK_02536 hypothetical protein 43138 43296 1
CDS - ZP_01217622.1 P3TCK_02541 hypothetical ferredoxin oxidoreductase 43786 45126 -1
CDS - ZP_01217623.1 P3TCK_02546 hydroxylamine reductase 45302 46966 -1
CDS - ZP_01217624.1 P3TCK_02551 anaerobic nitric oxide reductase transcription regulator 47154 48722 -1
CDS - ZP_01217625.1 P3TCK_02556 putative glycine cleavage operon activator 48844 49770 -1
CDS - ZP_01217626.1 P3TCK_02561 hypothetical protein 49863 50786 1
CDS - ZP_01217627.1 P3TCK_02566 hypothetical protein 51147 52829 1
CDS - ZP_01217628.1 P3TCK_02571 putative ABC-type sugar transport system, periplasmic component 53080 54342 -1
CDS - ZP_01217629.1 P3TCK_02576 putative Signal transduction histidine kinase 54426 55871 -1
CDS - ZP_01217630.1 P3TCK_02581 putative DNA-binding response regulator 56017 56742 -1
CDS - ZP_01217631.1 P3TCK_02586 hypothetical ribosomal subunit interface protein 57388 57744 1
CDS - ZP_01217632.1 P3TCK_02591 putative Lrp/AsnC-like transcriptional regulator 57887 58336 -1
CDS - ZP_01217633.1 P3TCK_02596 hypothetical protein 58515 59432 1
CDS - ZP_01217634.1 P3TCK_02601 sugar ABC transporter, periplasmic sugar-binding protein, putative 59764 61095 1
CDS - ZP_01217635.1 P3TCK_02606 sugar ABC transporter, permease protein 61168 62478 1
CDS - ZP_01217636.1 P3TCK_02611 sugar ABC transporter, permease protein 62487 63311 1
CDS - ZP_01217637.1 P3TCK_02616 putative multiple sugar transport protein 63311 64393 1
CDS - ZP_01217638.1 P3TCK_02621 hypothetical protein 64359 65849 1
CDS - ZP_01217639.1 P3TCK_02626 transcriptional regulator, LacI family protein 65846 66850 1
CDS - ZP_01217640.1 P3TCK_02631 myo-inositol-1-monophosphotase 66870 67637 1
CDS - ZP_01217641.1 P3TCK_02636 glucose/galactose transporter family protein 67785 69053 1
CDS - ZP_01217642.1 P3TCK_02641 hypothetical sensor protein 69180 70832 1
CDS - ZP_01217643.1 P3TCK_02646 hypothetical 2-component transcriptional regulator 70846 71565 1
CDS - ZP_01217644.1 P3TCK_02651 putative resistance protein, yhjX 71695 72939 1
CDS - ZP_01217645.1 P3TCK_02656 hypothetical protein 73029 74120 -1
CDS - ZP_01217646.1 P3TCK_02661 hypothetical amino acid permease 74154 75572 -1
CDS - ZP_01217647.1 P3TCK_02666 carbamate kinase 75862 76776 1
CDS - ZP_01217648.1 P3TCK_02671 hypothetical transcriptional regulator 76867 77490 1
CDS - ZP_01217649.1 P3TCK_02676 ornithine carbamoyltransferase 77854 78900 1
CDS - ZP_01217650.1 P3TCK_02681 putative MTA/SAH nucleosidase 79261 80130 1
CDS - ZP_01217651.1 P3TCK_02686 peptidase T 80226 81479 -1
CDS - ZP_01217652.1 P3TCK_02691 C4-dicarboxylate transporter 81617 82978 -1
CDS - ZP_01217653.1 P3TCK_02696 transcriptional regulator 83138 83980 -1
CDS - ZP_01217654.1 P3TCK_02701 hypothetical protein 84327 84944 -1
CDS - ZP_01217655.1 P3TCK_02706 hypothetical lipoprotein 85182 85658 -1
CDS - ZP_01217656.1 P3TCK_02711 putative ornithine carbamoyltransferase 85954 86955 1
CDS - ZP_01217657.1 P3TCK_02716 putative Cold shock-like protein 87127 87336 -1
CDS - ZP_01217658.1 P3TCK_02721 hypothetical protein 87663 87854 -1
CDS - ZP_01217659.1 P3TCK_02726 hypothetical lysophospholipase L2 88085 89023 -1
CDS - ZP_01217660.1 P3TCK_02731 hypothetical protein 89090 90052 -1
CDS - ZP_01217661.1 P3TCK_02736 putative translation initiation inhibitor, yjgF family protein 90289 90636 -1
CDS - ZP_01217662.1 P3TCK_02741 hypothetical cytochrome c 90948 91211 1
CDS - ZP_01217663.1 P3TCK_02746 hypothetical acetyltransferase 91344 91817 -1
CDS - ZP_01217664.1 P3TCK_02751 hypothetical protein 92180 94150 -1
CDS - ZP_01217665.1 P3TCK_02756 hypothetical transcriptional regulator 94262 95146 -1
CDS - ZP_01217666.1 P3TCK_02761 Putative Na+-driven multidrug efflux pump 95248 96627 1
CDS - ZP_01217667.1 P3TCK_02766 putative regulatory membrane protein 97245 97901 1
CDS - ZP_01217668.1 P3TCK_02771 hypothetical protein 97988 98392 1
CDS - ZP_01217669.1 P3TCK_02776 hypothetical protein 98389 98625 1
CDS - ZP_01217670.1 P3TCK_02781 Putative conserved protein 98784 99011 1
CDS - ZP_01217671.1 P3TCK_02786 transcriptional regulator, LysR family protein 99100 100017 -1
CDS - ZP_01217672.1 P3TCK_02791 hypothetical protein 100246 102303 1
CDS - ZP_01217673.1 P3TCK_02796 hypothetical protein 102506 103063 1
CDS - ZP_01217674.1 P3TCK_02801 putative transcriptional regulator, AraC/XylS family protein 103155 104045 1
CDS - ZP_01217675.1 P3TCK_02806 hypothetical protein 104236 105411 1
CDS - ZP_01217676.1 P3TCK_02811 hypothetical protein 105585 106130 1
CDS - ZP_01217677.1 P3TCK_02816 two component, sigma54 specific, transcriptional regulator, Fis family protein 106127 107482 1
CDS - ZP_01217678.1 P3TCK_02821 hypothetical protein 107715 108929 1
CDS - ZP_01217679.1 P3TCK_02826 phosphonate ABC transporter, periplasmic phosphonate-binding protein, putative 109178 110218 1
CDS - ZP_01217680.1 P3TCK_02831 phosphonate ABC transporter, ATP-binding protein 110324 111094 1
CDS - ZP_01217681.1 P3TCK_02836 hypothetical membrane channel protein component of Pn transporter 111082 111873 1
CDS - ZP_01217682.1 P3TCK_02841 binding-protein-dependent transport system permease protein 111873 112676 1
CDS - ZP_01217683.1 P3TCK_02846 Polymorphic membrane protein 112915 113652 -1
CDS - ZP_01217684.1 P3TCK_02851 hypothetical protein 113767 113850 -1
CDS - ZP_01217685.1 P3TCK_02856 hypothetical membrane protein 114266 115009 1