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Photobacterium profundum 3TCK, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_01219228.1 P3TCK_10353 hypothetical protein 1 121 -1
CDS - ZP_01219229.1 P3TCK_10358 putative methyl-accepting chemotaxis protein 599 2182 -1
CDS - ZP_01219230.1 P3TCK_10363 glycogen branching enzyme 2517 4667 -1
CDS - ZP_01219231.1 P3TCK_10368 putative 4-alpha-glucanotransferase 4721 6904 -1
CDS - ZP_01219232.1 P3TCK_10373 putative maltodextrin phosphorylase 7085 9547 -1
CDS - ZP_01219233.1 P3TCK_10378 transcriptional regulator MalT 10026 12734 1
CDS - ZP_01219234.1 P3TCK_10383 hypothetical protein 12823 13509 1
CDS - ZP_01219235.1 P3TCK_10388 hypothetical protein 13731 14396 1
CDS - ZP_01219236.1 P3TCK_10393 hypothetical protein 14598 14870 1
CDS - ZP_01219237.1 P3TCK_10398 hypothetical protein 14927 15697 1
CDS - ZP_01219238.1 P3TCK_10403 hypothetical protein 15694 17430 -1
CDS - ZP_01219239.1 P3TCK_10408 putative Zn-dependent peptidase 17444 18757 -1
CDS - ZP_01219240.1 P3TCK_10413 hypothetical transcriptional regulator 18943 19809 -1
CDS - ZP_01219241.1 P3TCK_10418 putative secretion protein 19921 20988 1
CDS - ZP_01219242.1 P3TCK_10423 hypothetical protein 21018 22112 1
CDS - ZP_01219243.1 P3TCK_10428 hypothetical protein 22263 23093 1
CDS - ZP_01219244.1 P3TCK_10433 hypothetical protein 23103 24413 1
CDS - ZP_01219245.1 P3TCK_10438 hypothetical protein 24464 25114 -1
CDS - ZP_01219246.1 P3TCK_10443 hypothetical protein 26141 27670 1
CDS - ZP_01219247.1 P3TCK_10448 hypothetical protein 27675 29000 1
CDS - ZP_01219248.1 P3TCK_10453 hypothetical molybdenum ABC transporter, ATP-binding protein 29078 30109 -1
CDS modB ZP_01219249.1 P3TCK_10458 molybdate transport permease protein 30222 30914 -1
CDS - ZP_01219250.1 P3TCK_10463 hypothetical molybdenum ABC transporter, periplasmic molybdenum-binding protein 30953 31732 -1
CDS - ZP_01219251.1 P3TCK_10468 putative aspartate ammonia-lyase 32499 33929 1
CDS - ZP_01219252.1 P3TCK_10473 hypothetical transcriptional regulator 34070 34969 -1
CDS - ZP_01219253.1 P3TCK_10478 hypothetical Na+/H+-dicarboxylate symporter 35356 36534 1
CDS - ZP_01219254.1 P3TCK_10483 putative malate oxidoreductase 36620 38305 1
CDS - ZP_01219255.1 P3TCK_10488 putative manganese-dependent inorganic pyrophosphatase 38449 39459 -1
CDS - ZP_01219256.1 P3TCK_10493 hypothetical protein 39681 40598 -1
tRNA - - P3TCK_t11115 tRNA-Ser 40910 40997 1
tRNA - - P3TCK_t11117 tRNA-Thr 41046 41118 1
tRNA - - P3TCK_t11119 tRNA-Tyr 41140 41221 1
CDS - ZP_01219257.1 P3TCK_10498 putative NADH-dependent flavin oxidoreductase 41448 42527 -1
CDS - ZP_01219258.1 P3TCK_10503 putative transcriptional regulator, TetR family protein 42715 43239 1
CDS - ZP_01219259.1 P3TCK_10508 hypothetical protein 43322 43495 1
CDS - ZP_01219260.1 P3TCK_10513 hypothetical protein 43543 43689 -1
CDS - ZP_01219261.1 P3TCK_10518 hypothetical protein 43943 44515 1
CDS - ZP_01219262.1 P3TCK_10523 hypothetical formate dehydrogenase 45018 45794 1
CDS - ZP_01219263.1 P3TCK_10528 TtrB 45796 46509 1
CDS - ZP_01219264.1 P3TCK_10533 hypothetical tetrathionate reductase 46497 49559 1
CDS - ZP_01219265.1 P3TCK_10538 hypothetical lipoate-protein ligase A 50060 51052 1
CDS - ZP_01219266.1 P3TCK_10543 putative cytosine permease/transport 51797 53038 1
CDS - ZP_01219267.1 P3TCK_10548 cytosine deaminase 53093 54382 1
CDS - ZP_01219268.1 P3TCK_10553 hypothetical trypsin-like serine protease 54486 55697 -1
CDS - ZP_01219269.1 P3TCK_10558 hypothetical protein 55916 56401 -1
CDS - ZP_01219270.1 P3TCK_10563 adenosine deaminase 56670 57674 -1
CDS - ZP_01219271.1 P3TCK_10568 hypothetical protein 57941 58192 -1
CDS - ZP_01219272.1 P3TCK_10573 hypothetical protein 58512 59060 1
CDS - ZP_01219273.1 P3TCK_10578 putative transcriptional regulator 59070 59294 1
CDS - ZP_01219274.1 P3TCK_10583 hypothetical ATP-binding protein ofiron/siderophore ABC transporter 59392 60138 -1
CDS - ZP_01219275.1 P3TCK_10588 ABC transporter permease (FecCD-family) 60138 61184 -1
CDS - ZP_01219276.1 P3TCK_10593 ABC type periplasmic iron siderophore/cobalamin binding protein 61181 62338 -1
CDS - ZP_01219277.1 P3TCK_10598 hypothetical protein 62742 63047 -1
CDS - ZP_01219278.1 P3TCK_10603 probable multidrug efflux system transmembrane protein 63310 66429 -1
CDS - ZP_01219279.1 P3TCK_10608 Secretion protein HlyD family protein 66444 67613 -1
CDS - ZP_01219280.1 P3TCK_10613 hypothetical protein 67983 68438 1
CDS - ZP_01219281.1 P3TCK_10618 DNA-binding response regulator ColR, putative 68632 69300 1
CDS - ZP_01219282.1 P3TCK_10623 probable two-component sensor 69306 70580 1
CDS - ZP_01219283.1 P3TCK_10628 hypothetical protein 70951 71484 -1
CDS - ZP_01219284.1 P3TCK_10633 ABC-type Mn2+/Zn2+ transport system, permease component 71488 71985 -1
CDS - ZP_01219285.1 P3TCK_10638 cyclopropane-fatty-acyl-phospholipid synthase 72037 73266 -1
CDS - ZP_01219286.1 P3TCK_10643 hypothetical protein 73328 74161 -1
CDS - ZP_01219287.1 P3TCK_10648 hypothetical protein 74158 75576 -1
CDS - ZP_01219288.1 P3TCK_10653 oxidoreductase, short-chain dehydrogenase/reductase family protein 75573 76304 -1
CDS - ZP_01219289.1 P3TCK_10658 putative transcriptional regulator 76301 76738 -1
CDS - ZP_01219290.1 P3TCK_10663 Deoxyribodipyrimidine photolyase 76761 78227 -1
CDS - ZP_01219291.1 P3TCK_10668 hypothetical protein 78264 79208 -1
CDS - ZP_01219292.1 P3TCK_10673 RNA polymerase sigma-70 factor 79511 80080 1
CDS - ZP_01219293.1 P3TCK_10678 Transcription negative regulator ChrR 80073 80759 1
CDS - ZP_01219294.1 P3TCK_10683 hypothetical protein 81062 82414 1
CDS - ZP_01219295.1 P3TCK_10688 putative virK protein 82511 83371 -1
CDS - ZP_01219296.1 P3TCK_10693 hypothetical protein 83681 83965 -1
CDS - ZP_01219297.1 P3TCK_10698 hypothetical protein 84353 84616 1
CDS - ZP_01219298.1 P3TCK_10703 putative two-component sensor 84769 86040 -1
CDS - ZP_01219299.1 P3TCK_10708 putaive two-component response regulator 86041 86721 -1
CDS - ZP_01219300.1 P3TCK_10713 hypothetical protein 86907 87704 1
CDS - ZP_01219301.1 P3TCK_10718 hypothetical protein 87718 90732 1
CDS - ZP_01219302.1 P3TCK_10723 hypothetical protein 90812 91129 -1
CDS - ZP_01219303.1 P3TCK_10728 hypothetical protein 91248 91934 -1
CDS - ZP_01219304.1 P3TCK_10733 hypothetical protein 92275 92787 1
CDS - ZP_01219305.1 P3TCK_10738 hypothetical protein 92888 93532 1
CDS - ZP_01219306.1 P3TCK_10743 DNA ligase 93740 94627 1
CDS - ZP_01219307.1 P3TCK_10748 putaive pyruvate dehydrogenase E1 component, beta subunit 96232 97212 1
CDS - ZP_01219308.1 P3TCK_10753 dihydrolipoamide acetyltransferase 97209 98360 1
CDS - ZP_01219309.1 P3TCK_10758 putative electron transfer flavoprotein, alpha subunit 98625 99620 -1
CDS - ZP_01219310.1 P3TCK_10763 putative electron transfer flavoprotein,beta subunit 99620 100414 -1
CDS - ZP_01219311.1 P3TCK_10768 putative electron transfer flavoprotein-ubiquinone oxidoreductase 100698 102359 1
CDS - ZP_01219312.1 P3TCK_10773 putative glycosidase 102481 104550 -1
CDS - ZP_01219313.1 P3TCK_10778 hypothetical protein 104711 105004 -1
CDS - ZP_01219314.1 P3TCK_10783 hypothetical saccharopine dehydrogenase 105190 106251 -1
CDS - ZP_01219315.1 P3TCK_10788 hypothetical protein 106267 107781 -1
CDS - ZP_01219316.1 P3TCK_10793 putative glutathione S-transferase 108490 109194 -1
CDS - ZP_01219317.1 P3TCK_10798 putative transcriptional regulator, LysR family protein 109325 110176 1
CDS - ZP_01219318.1 P3TCK_10803 hypothetical protein 110348 110704 1
CDS - ZP_01219319.1 P3TCK_10808 hypothetical protein 110746 110994 1
CDS fabG ZP_01219320.1 P3TCK_10813 3-ketoacyl-(acyl-carrier-protein) reductase 110799 110975 -1
CDS - ZP_01219321.1 P3TCK_10818 hypothetical protein 111227 111334 1
CDS - ZP_01219322.1 P3TCK_10823 putative dehydrogenase 111477 112235 -1
CDS - ZP_01219323.1 P3TCK_10828 putative 3-hydroxyisobutyrate dehydrogenase 112260 113162 -1
CDS - ZP_01219324.1 P3TCK_10833 putative enoyl-CoA hydratase 113213 114340 -1