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Photobacterium profundum 3TCK, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_01219380.1 P3TCK_12091 hypothetical protein 1 78 1
CDS - ZP_01219381.1 P3TCK_12096 hypothetical protein 311 865 1
CDS - ZP_01219382.1 P3TCK_12101 putative small integral membrane protein 935 1258 -1
CDS - ZP_01219383.1 P3TCK_12106 putative cytochrome c oxidase subunit III 1269 2018 -1
CDS - ZP_01219384.1 P3TCK_12111 hypothetical cytochrome c oxidase subunit III 2033 2659 -1
CDS - ZP_01219385.1 P3TCK_12116 putative cytochrome C oxidase 2652 4454 -1
CDS - ZP_01219386.1 P3TCK_12121 hypothetical cytochrome c oxidase subunit II 4492 5589 -1
CDS - ZP_01219387.1 P3TCK_12126 ribosome-associated GTPase 5862 6902 1
CDS - ZP_01219388.1 P3TCK_12131 hypothetical protein 7018 8895 1
CDS - ZP_01219389.1 P3TCK_12136 hypothetical protein 9099 9296 -1
CDS - ZP_01219390.1 P3TCK_12141 hypothetical protein 9974 10297 1
CDS - ZP_01219391.1 P3TCK_12146 putative tryptophanase 10807 12207 1
CDS - ZP_01219392.1 P3TCK_12151 transcriptional regulator, AraC family protein 12317 13081 -1
CDS - ZP_01219393.1 P3TCK_12156 multidrug resistance protein, putative 13178 14359 1
CDS - ZP_01219394.1 P3TCK_12161 hypothetical methyl-accepting chemotaxis protein 14458 16371 -1
CDS - ZP_01219395.1 P3TCK_12166 hypothetical protein 16890 17891 -1
CDS - ZP_01219396.1 P3TCK_12171 probable c-type cytochrome 17878 19212 -1
CDS - ZP_01219397.1 P3TCK_12176 (2Fe-2S)-binding protein 19209 19742 -1
CDS - ZP_01219398.1 P3TCK_12181 Twin-arginine translocation pathway signal 19739 22591 -1
CDS - ZP_01219399.1 P3TCK_12186 Cytochrome c553 23042 23380 1
CDS - ZP_01219400.1 P3TCK_12191 cytochrome c oxidase, subunit CcoN 23386 24798 1
CDS - ZP_01219401.1 P3TCK_12196 Cbb3-type cytochrome oxidase, cytochrome c subunit 24798 25415 1
CDS - ZP_01219402.1 P3TCK_12201 probable c-type cytochrome 25418 27565 1
CDS - ZP_01219403.1 P3TCK_12206 hypothetical protein 27562 27648 -1
CDS - ZP_01219404.1 P3TCK_12211 putative ammonium permease 27991 29199 1
CDS - ZP_01219405.1 P3TCK_12216 putative transcriptional regulator UhpA 29403 30029 1
CDS - ZP_01219406.1 P3TCK_12221 hypoyhetical signal transduction histidine kinase 30026 31639 1
CDS - ZP_01219407.1 P3TCK_12226 putative regulatory protein UhpC 31740 33065 1
CDS - ZP_01219408.1 P3TCK_12231 putative iron(III) ABC transporter, periplasmic iron-compound-binding protein 33510 34544 1
CDS - ZP_01219409.1 P3TCK_12236 putative ABC transporter, permease 34682 36778 1
CDS - ZP_01219410.1 P3TCK_12241 putative iron(III) ABC transporter, ATP-binding protein 36797 37852 1
CDS - ZP_01219411.1 P3TCK_12246 hypothetical protein 38163 39305 1
CDS - ZP_01219412.1 P3TCK_12251 putative outer membrane protein TolC 39298 40656 1
CDS - ZP_01219413.1 P3TCK_12256 hypothetical protein 40653 41870 1
CDS - ZP_01219414.1 P3TCK_12261 hypothetical protein 41872 43152 1
CDS - ZP_01219415.1 P3TCK_12266 putative ABC transporter, ATP-binding protein 43159 43866 1
CDS - ZP_01219416.1 P3TCK_12271 hypothetical protein 44379 45209 1
CDS - ZP_01219417.1 P3TCK_12276 putative ATP-dependent protease LA-related protein 45324 47696 -1
CDS - ZP_01219418.1 P3TCK_12281 putative mannitol-specific IIABC component, PTS system 48366 50318 1
CDS - ZP_01219419.1 P3TCK_12286 mannitol-1-phosphate 5-dehydrogenase 50410 51555 1
CDS - ZP_01219420.1 P3TCK_12291 putative mannitol operon repressor 51660 52190 1
CDS - ZP_01219421.1 P3TCK_12296 glucosamine-6-phosphate deaminase 52479 53279 1
CDS - ZP_01219422.1 P3TCK_12301 transcriptional regulator, DeoR family protein 53322 54080 -1
CDS - ZP_01219423.1 P3TCK_12306 hypothetical protein 54365 55270 1
CDS - ZP_01219424.1 P3TCK_12311 hypothetical protein 55273 56532 1
CDS - ZP_01219425.1 P3TCK_12316 hypothetical protein 56525 57157 1
CDS - ZP_01219426.1 P3TCK_12321 hydroxypyruvate isomerase, putative 57157 57933 1
CDS - ZP_01219427.1 P3TCK_12326 Gluconate permease 58090 59544 1
CDS - ZP_01219428.1 P3TCK_12331 hypothetical protein 59755 59946 -1
CDS - ZP_01219429.1 P3TCK_12336 putative transcription regulator protein 60462 60890 1
CDS - ZP_01219430.1 P3TCK_12341 membrane transport protein 60942 62147 1
CDS - ZP_01219431.1 P3TCK_12346 methionine sulfoxide reductase A 62213 62689 -1
CDS - ZP_01219432.1 P3TCK_12351 transcriptional regulator OruR, AraC family protein 62764 63783 -1
CDS - ZP_01219433.1 P3TCK_12356 hypothetical protein 63891 64889 -1
CDS - ZP_01219434.1 P3TCK_12361 putative amidase 64918 66489 -1
CDS - ZP_01219435.1 P3TCK_12366 hypothetical protein 67036 67917 -1
CDS - ZP_01219436.1 P3TCK_12371 hypothetical protein 68006 68422 -1
CDS - ZP_01219437.1 P3TCK_12376 putative transcriptional regulator 68541 68993 1
CDS - ZP_01219438.1 P3TCK_12381 hypothetical protein 69275 70129 -1
CDS - ZP_01219439.1 P3TCK_12386 hypothetical protein 70234 70968 -1
CDS - ZP_01219440.1 P3TCK_12391 hypothetical protein 71038 71781 -1
CDS - ZP_01219441.1 P3TCK_12396 hypothetical 2-hydroxychromene-2-carboxylateisomerase family protein 72092 72748 -1
CDS - ZP_01219442.1 P3TCK_12401 hypothetical protein 72928 73830 -1
CDS - ZP_01219443.1 P3TCK_12406 hypothetical protein 74040 74792 1
CDS - ZP_01219444.1 P3TCK_12411 hypothetical protein 74802 75518 1
CDS - ZP_01219445.1 P3TCK_12416 putative two-component response regulator 75692 76480 1
CDS - ZP_01219446.1 P3TCK_12421 putative two-component sensor histidine kinase 76527 77912 1
CDS - ZP_01219447.1 P3TCK_12426 transcriptional regulator, LysR family protein 77925 78827 -1
CDS - ZP_01219448.1 P3TCK_12431 Zinc-containing alcohol dehydrogenase superfamily protein 78997 79983 1
CDS - ZP_01219449.1 P3TCK_12436 putative membrane-associated protein 80115 80525 1
CDS - ZP_01219450.1 P3TCK_12441 hypothetical protein 80662 81174 1
CDS - ZP_01219451.1 P3TCK_12446 hypothetical protein 81328 82140 -1
CDS - ZP_01219452.1 P3TCK_12451 hypothetical protein 82361 83131 -1
CDS - ZP_01219453.1 P3TCK_12456 hypothetical protein 83312 83689 -1
CDS - ZP_01219454.1 P3TCK_12461 probable two-component system sensor histidine kinase (Pho family) 83845 85272 -1
CDS - ZP_01219455.1 P3TCK_12466 probable two-component system response regulator (Pho family) 85250 85927 -1
CDS - ZP_01219456.1 P3TCK_12471 hypothetical protein 86082 86594 1
CDS - ZP_01219457.1 P3TCK_12476 hypothetical ferredoxin-type protein NapF 86631 87188 -1
CDS - ZP_01219458.1 P3TCK_12481 hypothetical protein 87188 87772 -1
CDS - ZP_01219459.1 P3TCK_12486 putative anaerobic dimethyl sulfoxide reductase, subunit A 88136 90580 1
CDS - ZP_01219460.1 P3TCK_12491 anaerobic dimethyl sulfoxide reductase chain B 90591 91205 1
CDS - ZP_01219461.1 P3TCK_12496 putative anaerobic dimethyl sulfoxide reductase subunit C 91207 92052 1
CDS - ZP_01219462.1 P3TCK_12501 drug resistance transporter, Bcr/CflA family protein 92137 93300 -1
CDS - ZP_01219463.1 P3TCK_12506 putative serine transporter 93434 94729 -1
CDS - ZP_01219464.1 P3TCK_12511 hypothetical protein 94905 95168 -1
CDS - ZP_01219465.1 P3TCK_12516 potassium uptake protein, Kup system 95237 97099 -1
CDS - ZP_01219466.1 P3TCK_12521 DNA-binding response regulator 97248 97949 -1
CDS - ZP_01219467.1 P3TCK_12526 sensor histidine kinase 97939 99432 -1
CDS - ZP_01219468.1 P3TCK_12531 putative pyruvate-flavodoxin oxidoreductase 99535 102984 1
CDS - ZP_01219469.1 P3TCK_12536 putative long-chain-fatty-acid-CoA ligase 103125 104672 -1
CDS - ZP_01219470.1 P3TCK_12541 anaerobic C4-dicarboxylate transporter 105063 106376 -1
CDS - ZP_01219471.1 P3TCK_12546 hypothetical transporter, LysE family protein 106582 107190 -1
CDS - ZP_01219472.1 P3TCK_12551 hypothetical protein 107356 108723 1
CDS - ZP_01219473.1 P3TCK_12556 GntR-family transcriptional regulator 108810 109556 -1
CDS - ZP_01219474.1 P3TCK_12561 hypothetical protein 109715 110746 1
CDS - ZP_01219475.1 P3TCK_12566 cytosine/purines, uracil, thiamine, allantoin permease family protein 110760 112163 1
CDS - ZP_01219476.1 P3TCK_12571 hypothetical protein 112173 113123 1
CDS - ZP_01219477.1 P3TCK_12576 hypothetical protein 113208 113417 -1
CDS - ZP_01219478.1 P3TCK_12581 putative L-serine dehydratase 1 113845 115215 1
CDS - ZP_01219479.1 P3TCK_12586 hypothetical phospholipase/carboxylesterase family protein 115301 115966 -1