xBASE Logo
About | Contact | Home

Photobacterium profundum 3TCK, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_01219847.1 P3TCK_01394 hypothetical protein 1 612 -1
CDS - ZP_01219848.1 P3TCK_01399 transcriptional regulator, LacI family protein 740 1735 -1
CDS - ZP_01219849.1 P3TCK_01404 hypothetical protein 2010 2747 -1
CDS - ZP_01219850.1 P3TCK_01409 putative 6-phospho-beta-glucosidase 2812 4125 -1
CDS - ZP_01219851.1 P3TCK_01414 putative phosphotransferase system cellobiose-specific component IIC 4183 5517 -1
CDS - ZP_01219852.1 P3TCK_01419 hypothetical protein 5651 5794 -1
CDS - ZP_01219853.1 P3TCK_01424 putative deacetylase 6184 7470 1
CDS - ZP_01219854.1 P3TCK_01429 hypothetical protein 7619 7960 -1
CDS - ZP_01219855.1 P3TCK_01434 hypothetical protein 7964 8167 -1
CDS - ZP_01219856.1 P3TCK_01439 site-specific recombinase, phage integrase family protein 8938 10110 1
CDS - ZP_01219857.1 P3TCK_01444 mobilization protein-like 10139 11041 -1
CDS - ZP_01219858.1 P3TCK_01449 hypothetical protein 11038 11241 -1
CDS - ZP_01219859.1 P3TCK_01454 hypothetical protein 11238 11486 -1
CDS - ZP_01219860.1 P3TCK_01459 hypothetical protein 11489 11656 -1
CDS - ZP_01219861.1 P3TCK_01464 hypothetical protein 11657 11845 -1
CDS - ZP_01219862.1 P3TCK_01469 hypothetical protein 12078 13697 1
CDS - ZP_01219863.1 P3TCK_01474 putative type II protein secretion system D protein 13941 15257 -1
CDS - ZP_01219864.1 P3TCK_01479 hypothetical protein 15407 15688 1
CDS - ZP_01219865.1 P3TCK_01484 hypothetical protein 15690 15815 1
CDS - ZP_01219866.1 P3TCK_01489 hypothetical protein 15901 16053 1
CDS - ZP_01219867.1 P3TCK_01494 hypothetical protein 16216 16326 1
CDS - ZP_01219868.1 P3TCK_01499 hypothetical protein 16336 18051 1
CDS - ZP_01219869.1 P3TCK_01504 hypothetical protein 18061 18372 1
CDS - ZP_01219870.1 P3TCK_01509 filamentous phage phiLf protein I 18404 19573 1
tRNA - - P3TCK_t02102 tRNA-Leu 19807 19888 -1
CDS - ZP_01219871.1 P3TCK_01514 hypothetical protein 20206 20310 1
CDS - ZP_01219872.1 P3TCK_01519 hypothetical protein 20307 20798 1
CDS - ZP_01219873.1 P3TCK_01524 putative permease 20869 21939 -1
CDS - ZP_01219874.1 P3TCK_01529 putative permease 21939 23039 -1
CDS - ZP_01219875.1 P3TCK_01534 leucyl aminopeptidase 23235 24743 1
CDS - ZP_01219876.1 P3TCK_01539 DNA polymerase III, chi subunit 24795 25247 1
CDS - ZP_01219877.1 P3TCK_01544 valyl-tRNA synthetase 25276 28149 1
CDS - ZP_01219878.1 P3TCK_01549 hypothetical membrane protein 28414 28827 1
CDS - ZP_01219879.1 P3TCK_01554 Zn-dependent protease with chaperone function 29038 30045 -1
CDS - ZP_01219880.1 P3TCK_01559 predicted membrane protein 30042 31193 -1
CDS - ZP_01219881.1 P3TCK_01564 hypothetical protein 31020 31109 1
CDS - ZP_01219882.1 P3TCK_01569 hypothetical transcriptional regulator, MarR family protein 31500 32405 1
CDS - ZP_01219883.1 P3TCK_01574 putative beta-mannosidase precursor 32494 34932 -1
CDS - ZP_01219884.1 P3TCK_01579 hypothetical protein 35161 35568 -1
CDS - ZP_01219885.1 P3TCK_01584 putative membrane protein 36316 37761 1
CDS - ZP_01219886.1 P3TCK_01589 arginine deiminase 38995 40215 1
CDS - ZP_01219887.1 P3TCK_01594 carbamate kinase 40335 41246 1
CDS - ZP_01219888.1 P3TCK_01599 ornithine carbamoyltransferase 41372 42382 1
CDS pyrB ZP_01219889.1 P3TCK_01604 aspartate carbamoyltransferase catalytic subunit 42720 42845 -1
CDS - ZP_01219890.1 P3TCK_01609 putative aspartate transcarbamylase catalytic subunit 42844 43773 1
CDS - ZP_01219891.1 P3TCK_01614 aspartate carbamoyltransferase regulatory subunit 43790 44254 1
CDS - ZP_01219892.1 P3TCK_01619 hypothetical protein 44468 45457 1
CDS - ZP_01219893.1 P3TCK_01624 hypothetical arginine repressor 45614 46108 1
CDS - ZP_01219894.1 P3TCK_01629 Putative translation initiation inhibitor 46257 46643 1
CDS - ZP_01219895.1 P3TCK_01634 hypothetical isopentenyldiphosphate isomerase 46933 47472 -1
CDS - ZP_01219896.1 P3TCK_01639 putative 1-acyl-sn-glycerol-3-phosphateacyltransferase 47610 48335 -1
CDS - ZP_01219897.1 P3TCK_01644 DNA topoisomerase IV subunit A 48531 50801 -1
CDS - ZP_01219898.1 P3TCK_01649 DNA topoisomerase IV subunit B 50938 52821 -1
CDS - ZP_01219899.1 P3TCK_01654 hypothetical protein 52943 53521 -1
CDS - ZP_01219900.1 P3TCK_01659 putative cyclic AMP phosphodiesterase 53522 54346 -1
CDS - ZP_01219901.1 P3TCK_01664 hypothetical protein 54378 54770 -1
CDS - ZP_01219902.1 P3TCK_01669 Putative MutT/nudix family protein 54902 55534 -1
CDS - ZP_01219903.1 P3TCK_01674 putative outer membrane protein TolC 55789 57075 1
CDS - ZP_01219904.1 P3TCK_01679 putative ADP-heptose synthase 57236 58666 -1
CDS - ZP_01219905.1 P3TCK_01684 putative glutamate-ammonia-ligase adenylyltransferase 58827 61700 -1
CDS - ZP_01219906.1 P3TCK_01689 Putative methyl-accepting chemotaxis protein 61888 63489 -1
CDS - ZP_01219907.1 P3TCK_01694 hypothetical potassium channel protein 63672 64463 1
CDS - ZP_01219908.1 P3TCK_01699 hypothetical protein 64557 66074 -1
CDS - ZP_01219909.1 P3TCK_01704 putative phosphate transport regulator 66260 66940 1
CDS - ZP_01219910.1 P3TCK_01709 putative phosphate/sulphate permease 66972 68240 1
CDS - ZP_01219911.1 P3TCK_01714 hypothetical protein 68354 68971 1
CDS - ZP_01219912.1 P3TCK_01719 hypothetical protein 69057 70004 -1
CDS - ZP_01219913.1 P3TCK_01724 putative general secretion pathway protein A 70004 71569 -1
CDS - ZP_01219914.1 P3TCK_01729 putative tRNA nucleotidyltransferase 71997 73232 1
CDS uppP ZP_01219915.1 P3TCK_01734 undecaprenyl pyrophosphate phosphatase 73362 74165 -1
CDS - ZP_01219916.1 P3TCK_01739 hypothetical 2-amino-4-hydroxy-6-hydroxymethyldihydr opteridinepyrophosphokinase 74183 74671 -1
CDS - ZP_01219917.1 P3TCK_01744 putative Dihydroneopterin aldolase 74668 75021 -1
CDS - ZP_01219918.1 P3TCK_01749 hypothetical protein 75256 75867 1
CDS - ZP_01219919.1 P3TCK_01754 putative O-sialoglycoprotein endopeptidase 75948 76967 -1
CDS - ZP_01219920.1 P3TCK_01759 30S ribosomal protein S21 77219 77434 1
CDS - ZP_01219921.1 P3TCK_01764 hypothetical protein 77461 77904 1
CDS - ZP_01219922.1 P3TCK_01769 DNA primase 78229 79785 1
CDS - ZP_01219923.1 P3TCK_01774 RNA polymerase sigma factor 79878 81716 1
tRNA - - P3TCK_t02098 tRNA-Met 81900 81972 1
CDS - ZP_01219924.1 P3TCK_01779 pyruvate kinase 82646 84058 1
CDS - ZP_01219925.1 P3TCK_01784 putative LuxZ 84428 85051 1
CDS - ZP_01219926.1 P3TCK_01789 hypothetical protein 85153 85284 -1
CDS - ZP_01219927.1 P3TCK_01794 acetolactate synthase III small subunit 85555 86052 -1
CDS - ZP_01219928.1 P3TCK_01799 acetolactate synthase III large subunit 86052 87770 -1
CDS - ZP_01219929.1 P3TCK_01804 putative long-chain-fatty-acid-CoA ligase 88327 90141 -1
CDS - ZP_01219930.1 P3TCK_01809 putative transcriptional regulator, LysR family protein 90505 91461 -1
CDS - ZP_01219931.1 P3TCK_01814 hypothetical protein 91807 92919 -1
CDS - ZP_01219932.1 P3TCK_01819 hypothetical protein 92916 93425 -1
CDS - ZP_01219933.1 P3TCK_01824 putative Cation/multidrug efflux pump 93689 96799 -1
CDS - ZP_01219934.1 P3TCK_01829 hypothetical protein 96796 98139 -1
CDS - ZP_01219935.1 P3TCK_01834 putative transcriptional regulator 98136 98780 -1
CDS - ZP_01219936.1 P3TCK_01839 2-isopropylmalate synthase 99431 100981 1
CDS - ZP_01219937.1 P3TCK_01844 3-isopropylmalate dehydrogenase 100984 102072 1
CDS - ZP_01219938.1 P3TCK_01849 isopropylmalate isomerase large subunit 102169 103599 1
CDS leuD ZP_01219939.1 P3TCK_01854 isopropylmalate isomerase small subunit 103617 104219 1
CDS - ZP_01219940.1 P3TCK_01859 hypothetical protein 104409 105191 1
CDS - ZP_01219941.1 P3TCK_01864 putative ABC-type thiamine transport system, periplasmic component 105622 106608 1
CDS thiP ZP_01219942.1 P3TCK_01869 thiamin ABC transporter membrane component 106605 108251 1
CDS - ZP_01219943.1 P3TCK_01874 putative thiamine ABC transporter 108252 108989 1
CDS - ZP_01219944.1 P3TCK_01879 hypothetical protein 109009 110385 -1