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Photobacterium profundum 3TCK, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_01220456.1 P3TCK_13813 dinucleoside polyphosphate hydrolase 1 240 1
CDS - ZP_01220457.1 P3TCK_13818 hypothetical phosphoenolpyruvate-protein phosphotransferase 284 2539 1
CDS - ZP_01220458.1 P3TCK_13823 hypothetical protein 2571 3374 1
CDS - ZP_01220459.1 P3TCK_13828 prolipoprotein diacylglyceryl transferase 3449 4249 1
CDS - ZP_01220460.1 P3TCK_13833 thymidylate synthase 4407 5258 1
CDS - ZP_01220461.1 P3TCK_13838 putative sodium-dependent phosphate pump NptA 5384 6526 -1
CDS - ZP_01220462.1 P3TCK_13843 putative Na+/H+ antiporter 7009 8166 1
CDS - ZP_01220463.1 P3TCK_13848 hypothetical protein 8168 8437 1
CDS - ZP_01220464.1 P3TCK_13853 putative transcriptional activator protein NhaR 8541 9428 1
CDS - ZP_01220465.1 P3TCK_13858 putative Transcription activator HlyU 9525 9818 1
CDS - ZP_01220466.1 P3TCK_13863 putative ribosomal protein S20 9927 10187 -1
CDS - ZP_01220467.1 P3TCK_13868 virulence factor MviN 10395 11954 1
CDS - ZP_01220468.1 P3TCK_13873 hypothetical protein 12069 12989 1
CDS - ZP_01220469.1 P3TCK_13878 isoleucyl-tRNA synthetase 12986 15832 1
CDS lspA ZP_01220470.1 P3TCK_13883 signal peptidase II 15832 16356 1
CDS - ZP_01220471.1 P3TCK_13888 putative peptidyl-prolyl cis-trans isomerase, FKBP-type 16527 16961 1
CDS - ZP_01220472.1 P3TCK_13893 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 16974 17915 1
CDS - ZP_01220473.1 P3TCK_13898 dihydrodipicolinate reductase 18039 18848 1
CDS - ZP_01220474.1 P3TCK_13903 carbamoyl-phosphate synthase small subunit 19372 20526 1
CDS carB ZP_01220475.1 P3TCK_13908 carbamoyl-phosphate synthase large subunit 20543 23764 1
CDS - ZP_01220476.1 P3TCK_13913 hypothetical protein 24307 25155 1
CDS - ZP_01220477.1 P3TCK_13918 hypothetical D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine- endopeptidase 25259 26662 -1
CDS - ZP_01220478.1 P3TCK_13923 ompL_phopr porin-like protein L precursor 26785 27786 -1
CDS greA ZP_01220479.1 P3TCK_13928 transcription elongation factor GreA 28272 28745 1
CDS - ZP_01220480.1 P3TCK_13933 putative RNA-binding protein 28883 29179 -1
CDS - ZP_01220481.1 P3TCK_13938 23S rRNA methylase 29318 29947 1
CDS - ZP_01220482.1 P3TCK_13943 putative cell division protein FtsH 29997 31988 1
CDS - ZP_01220483.1 P3TCK_13948 putative dihydropteroate synthase 32063 32893 1
CDS - ZP_01220484.1 P3TCK_13953 putative phosphoglucomutase/phosphomannomutase family protein MrsA 32995 34332 1
CDS - ZP_01220485.1 P3TCK_13958 putative protein export-membrane protein 34561 34896 1
tRNA - - P3TCK_t14335 tRNA-Leu 34908 34989 1
tRNA - - P3TCK_t14337 tRNA-Met 35051 35124 1
CDS - ZP_01220486.1 P3TCK_13963 hypothetical protein 35306 35761 1
CDS - ZP_01220487.1 P3TCK_13968 transcription elongation factor NusA 35784 37271 1
CDS infB ZP_01220488.1 P3TCK_13973 translation initiation factor IF-2 37298 40033 1
CDS - ZP_01220489.1 P3TCK_13978 putative ribosome-binding factor A 40158 40562 1
CDS truB ZP_01220490.1 P3TCK_13983 tRNA pseudouridine synthase B 40562 41512 1
CDS - ZP_01220491.1 P3TCK_13988 30S ribosomal protein S15 41719 41988 1
CDS - ZP_01220492.1 P3TCK_13993 putative polyribonucleotide nucleotidyltransferase 42274 44397 1
CDS - ZP_01220493.1 P3TCK_13998 hypothetical lipoprotein precursor, NlpI 44481 45374 1
CDS - ZP_01220494.1 P3TCK_14003 putative protease 45465 46340 -1
CDS - ZP_01220495.1 P3TCK_14008 putative protease 46352 47359 -1
CDS - ZP_01220496.1 P3TCK_14013 putative c-di-GMP phosphodiesterase A-related protein 47506 49545 -1
CDS - ZP_01220497.1 P3TCK_14018 putative lipid carrier protein 49729 50331 1
CDS - ZP_01220498.1 P3TCK_14023 putative acetyltransferase 50321 50824 1
CDS - ZP_01220499.1 P3TCK_14028 Putative DNA polymerase III, psi subunit 51004 51405 1
CDS - ZP_01220500.1 P3TCK_14033 putative ribosomal-protein-alanine acetyltransferase 51395 51841 1
CDS - ZP_01220501.1 P3TCK_14038 peptide chain release factor 3 52061 53641 1
CDS - ZP_01220502.1 P3TCK_14043 putative glycogen operon protein 53818 55938 1
CDS - ZP_01220503.1 P3TCK_14048 hypothetical protein 55978 56187 1
CDS - ZP_01220504.1 P3TCK_14053 hypothetical protein 56177 56971 1
CDS - ZP_01220505.1 P3TCK_14058 putative NupC family protein 57192 58445 1
CDS - ZP_01220506.1 P3TCK_14063 deoxyribose-phosphate aldolase 59386 60159 1
CDS - ZP_01220507.1 P3TCK_14068 thymidine phosphorylase 60361 61692 1
CDS - ZP_01220508.1 P3TCK_14073 phosphopentomutase 61703 62923 1
CDS - ZP_01220509.1 P3TCK_14078 purine nucleoside phosphorylase 63061 63786 1
CDS - ZP_01220510.1 P3TCK_14083 putative SerB-cotransposed membrane protein precursor 63904 64515 -1
CDS - ZP_01220511.1 P3TCK_14088 putative phosphoserine phosphatase 64793 65758 1
CDS - ZP_01220512.1 P3TCK_14093 hypothetical protein 65904 68255 -1
CDS - ZP_01220513.1 P3TCK_14098 hypothetical ATP-dependent protease 68402 69781 1
CDS - ZP_01220514.1 P3TCK_14103 hypothetical ToxR-activated protein TagE 69945 70937 -1
CDS - ZP_01220515.1 P3TCK_14108 hypothetical protein 70954 71334 -1
CDS - ZP_01220516.1 P3TCK_14113 putative ABC transporter, ATP-binding protein 71618 73285 -1
CDS - ZP_01220517.1 P3TCK_14118 hypothetical soluble lytic murein transglycosylase 73456 75351 1
CDS - ZP_01220518.1 P3TCK_14123 Trp operon repressor 75472 75783 1
CDS - ZP_01220519.1 P3TCK_14128 hypothetical protein 75908 76432 -1
CDS - ZP_01220520.1 P3TCK_14133 hypothetical transcriptional regulator 76620 77258 -1
CDS - ZP_01220521.1 P3TCK_14138 putative response regulator 78025 78837 -1
CDS - ZP_01220522.1 P3TCK_14143 hypothetical protein 78883 79932 -1
CDS - ZP_01220523.1 P3TCK_14148 hypothetical protein 79932 81347 -1
CDS - ZP_01220524.1 P3TCK_14153 hypothetical protein 81350 82246 -1
CDS - ZP_01220525.1 P3TCK_14158 hypothetical protein 82239 83573 -1
CDS - ZP_01220526.1 P3TCK_14163 putative ABC transporter ATP-binding protein 83561 84259 -1
CDS - ZP_01220527.1 P3TCK_14168 hypothetical protein 84353 85051 -1
CDS - ZP_01220528.1 P3TCK_14173 hypothetical protein 85287 86252 1
CDS - ZP_01220529.1 P3TCK_14178 hypothetical protein 86409 86864 1
CDS - ZP_01220530.1 P3TCK_14183 hypothetical protein 86851 87462 1
CDS - ZP_01220531.1 P3TCK_14188 hypothetical protein 87555 88175 -1
CDS - ZP_01220532.1 P3TCK_14193 hypothetical protein 88388 88921 1
CDS - ZP_01220533.1 P3TCK_14198 hypothetical protein 89130 90647 1
CDS - ZP_01220534.1 P3TCK_14203 transcriptional regulators, LysR family protein 90700 91596 -1
CDS - ZP_01220535.1 P3TCK_14208 hypothetical protein 91826 92335 1
CDS - ZP_01220536.1 P3TCK_14213 hypothetical protein 92672 92812 1
CDS - ZP_01220537.1 P3TCK_14218 hypothetical protein 92757 93722 1
CDS - ZP_01220538.1 P3TCK_14223 hypothetical protein 93728 94948 1
CDS - ZP_01220539.1 P3TCK_14228 hypothetical protein 94935 95243 1
CDS - ZP_01220540.1 P3TCK_14233 hypothetical protein 95233 97281 1
CDS - ZP_01220541.1 P3TCK_14238 hypothetical protein 97341 99053 1
CDS - ZP_01220542.1 P3TCK_14243 7,8-dihydro-8-oxoguanine-triphosphatase-like protein 99222 99614 1
CDS - ZP_01220543.1 P3TCK_14248 DNA repair helicase 99634 102480 1
CDS - ZP_01220544.1 P3TCK_14253 hypothetical protein 102560 104341 1
CDS - ZP_01220545.1 P3TCK_14258 SsrA-binding protein 105099 105575 -1
CDS - ZP_01220546.1 P3TCK_14263 hypothetical protein 105574 105681 1
CDS - ZP_01220547.1 P3TCK_14268 hypothetical protein 105808 106242 1
CDS - ZP_01220548.1 P3TCK_14273 hypothetical protein 106232 106558 1
CDS - ZP_01220549.1 P3TCK_14278 hypothetical small protein A 106640 106996 -1
CDS - ZP_01220550.1 P3TCK_14283 putative DNA repair protein RecN 107199 108866 -1
CDS ppnK ZP_01220551.1 P3TCK_14288 inorganic polyphosphate/ATP-NAD kinase 109045 109926 -1
CDS - ZP_01220552.1 P3TCK_14293 putative heat shock protein GrpE 110140 110760 1
CDS dnaK ZP_01220553.1 P3TCK_14298 molecular chaperone DnaK 110968 112887 1