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Photobacterium profundum 3TCK, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_01220785.1 P3TCK_25940 hypothetical protein 1 1107 -1
CDS - ZP_01220786.1 P3TCK_25945 ribose-phosphate pyrophosphokinase 1363 2310 -1
CDS - ZP_01220787.1 P3TCK_25950 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 2343 3245 -1
CDS - ZP_01220788.1 P3TCK_25955 hypothetical outer membrane lipoprotein LolB 3242 3877 -1
CDS - ZP_01220789.1 P3TCK_25960 glutamyl-tRNA reductase 4263 5525 1
CDS - ZP_01220790.1 P3TCK_25965 peptide chain release factor 1 5538 6626 1
CDS - ZP_01220791.1 P3TCK_25970 putative HemK protein, Methylase of polypeptide chain release factors 6626 7474 1
CDS - ZP_01220792.1 P3TCK_25975 hypothetical protein 7487 7867 1
CDS - ZP_01220793.1 P3TCK_25980 hypothetical protein 7870 8679 1
CDS - ZP_01220794.1 P3TCK_25985 2-dehydro-3-deoxyphosphooctonate aldolase 8699 9553 1
CDS - ZP_01220795.1 P3TCK_25990 putative serine transporter 9861 11117 1
CDS - ZP_01220796.1 P3TCK_25995 putative methyl-accepting chemotaxis protein 11199 13082 -1
CDS - ZP_01220797.1 P3TCK_26000 putative methyl-accepting chemotaxis protein 13317 15197 -1
CDS - ZP_01220798.1 P3TCK_26005 putative Na+/H+ antiporter 15434 16789 1
CDS - ZP_01220799.1 P3TCK_26010 hypothetical protein 17068 18741 1
CDS - ZP_01220800.1 P3TCK_26015 hypothetical protein 18960 19436 1
CDS - ZP_01220801.1 P3TCK_26020 hypothetical transcriptional regulator, LysR family protein 19447 20391 1
CDS - ZP_01220802.1 P3TCK_26025 Putative threonine efflux protein 20447 21061 1
CDS - ZP_01220803.1 P3TCK_26030 hypothetical protein 21166 21747 -1
CDS - ZP_01220804.1 P3TCK_26035 conserved hypothetical protein 21877 22017 -1
tRNA - - P3TCK_t26442 tRNA-Pro 22282 22355 1
tRNA - - P3TCK_t26444 tRNA-Pro 22423 22496 1
tRNA - - P3TCK_t26446 tRNA-Pro 22564 22637 1
tRNA - - P3TCK_t26448 tRNA-Pro 22705 22778 1
CDS - ZP_01220805.1 P3TCK_26040 hypothetical protein 22878 23738 -1
CDS - ZP_01220806.1 P3TCK_26045 hypothetical protein 23894 23974 -1
CDS - ZP_01220807.1 P3TCK_26050 hypothetical cation-transporting ATPase 23976 26873 -1
CDS - ZP_01220808.1 P3TCK_26055 hypothetical protein 26872 27018 1
CDS - ZP_01220809.1 P3TCK_26060 hypothetical SoxR, transcriptional regulator 27102 27491 1
CDS - ZP_01220810.1 P3TCK_26065 hypothetical protein 27488 27928 -1
CDS - ZP_01220811.1 P3TCK_26070 hypothetical protein 27915 28550 -1
CDS - ZP_01220812.1 P3TCK_26075 hypothetical protein 29229 30188 1
CDS - ZP_01220813.1 P3TCK_26080 Hypothetical heat shock protein 30364 30789 1
CDS - ZP_01220814.1 P3TCK_26085 putative thioredoxin-like protein 30871 31725 -1
CDS - ZP_01220815.1 P3TCK_26090 hypothetical protein 32199 32279 1
CDS - ZP_01220816.1 P3TCK_26095 hypothetical oxidoreductase, short-chain dehydrogenase/reductase family protein 32276 33103 -1
CDS - ZP_01220817.1 P3TCK_26100 putative arylesterase 33140 33739 -1
CDS - ZP_01220818.1 P3TCK_26105 putative ABC transporter ATP-binding protein 33738 34412 1
CDS - ZP_01220819.1 P3TCK_26110 hypothetical permease 34409 36874 1
CDS - ZP_01220820.1 P3TCK_26115 hypothetical sugar nucleotide epimerase 36945 37868 -1
CDS - ZP_01220821.1 P3TCK_26120 putative PTS system mannose-specific, factor IIC 38252 38986 1
CDS - ZP_01220822.1 P3TCK_26125 hypothetical PTS system mannose-specific, factor IIC 39005 39787 1
CDS - ZP_01220823.1 P3TCK_26130 putative nitrogen regulatory protein P-II family protein 39787 40137 1
CDS - ZP_01220824.1 P3TCK_26135 hypothetical protein 40134 40565 1
CDS - ZP_01220825.1 P3TCK_26140 hypothetical phosphoesterase 40684 41232 1
CDS - ZP_01220826.1 P3TCK_26145 uncharacterized protein conserved in bacteria 41343 41618 -1
CDS - ZP_01220827.1 P3TCK_26150 putative formate transporter 1 41999 42844 1
CDS - ZP_01220828.1 P3TCK_26155 phosphate acetyltransferase 43102 45255 -1
CDS - ZP_01220829.1 P3TCK_26160 hypothetical protein 45074 45277 1
CDS - ZP_01220830.1 P3TCK_26165 acetate/propionate kinase 45420 46616 -1
CDS - ZP_01220831.1 P3TCK_26170 hypothetical protein 46954 47403 1
CDS - ZP_01220832.1 P3TCK_26175 hypothetical protein 47610 47921 -1
CDS - ZP_01220833.1 P3TCK_26180 putative ABC transporter, ATP-binding protein 48150 48944 -1
CDS - ZP_01220834.1 P3TCK_26185 putative ABC transporter, permease protein 48960 49886 -1
CDS - ZP_01220835.1 P3TCK_26190 putative ABC transporter substrate-binding protein 49954 50922 -1
CDS - ZP_01220836.1 P3TCK_26195 hypothetical iron-regulated protein 51357 52322 -1
CDS - ZP_01220837.1 P3TCK_26200 putative SAM-dependent methyltransferase 52534 53397 -1
CDS - ZP_01220838.1 P3TCK_26205 putative outer membrane protein 53815 54870 1
CDS - ZP_01220839.1 P3TCK_26210 hypothetical protein 54954 55595 1
CDS - ZP_01220840.1 P3TCK_26215 putative PTS system, cellobiose-specific IIA component 55703 56041 -1
CDS - ZP_01220841.1 P3TCK_26220 hypothetical phosphotransferase system cellobiose-specific component IIC 56044 57369 -1
CDS - ZP_01220842.1 P3TCK_26225 putative PTS system, cellobiose-specific IIB component 57387 57704 -1
CDS - ZP_01220843.1 P3TCK_26230 phosphoglycerate transport system transcription regulator 58430 59713 -1
CDS - ZP_01220844.1 P3TCK_26235 hypothetical phosphoglycerate transport regulatory protein PgtB 59700 62060 -1
CDS - ZP_01220845.1 P3TCK_26240 hypothetical phosphoglycerate transport regulatory protein PgtC 62060 63313 -1
CDS - ZP_01220846.1 P3TCK_26245 hypothetical protein 63586 64086 -1
CDS - ZP_01220847.1 P3TCK_26250 hypothetical protein 64325 64978 1
CDS - ZP_01220848.1 P3TCK_26255 hypothetical formate transporter 1 65110 66588 -1
CDS - ZP_01220849.1 P3TCK_26260 putative transcriptional regulator, LysR family protein 66809 67714 1
CDS - ZP_01220850.1 P3TCK_26265 putative formate-tetrahydrofolate ligase 67982 69736 -1
CDS - ZP_01220851.1 P3TCK_26270 hypothetical protein 70005 70082 1
CDS - ZP_01220852.1 P3TCK_26275 hypothetical signal transduction histidine kinase regulating citrate/malate metabolism 70012 71616 1
CDS - ZP_01220853.1 P3TCK_26280 hypothetical Response regulator of citrate/malate metabolism 71656 72333 1
CDS - ZP_01220854.1 P3TCK_26285 hypothetical transcriptional regulator 72389 73288 -1
CDS - ZP_01220855.1 P3TCK_26290 putative ThiJ/PfpI family protein 73479 74159 1
CDS - ZP_01220856.1 P3TCK_26295 putative iron-containing alcohol dehydrogenase 74306 75457 1
CDS - ZP_01220857.1 P3TCK_26300 hypothetical protein 75741 75893 1
CDS - ZP_01220858.1 P3TCK_26305 putative tricarboxylic transport TctA 76022 77554 -1
CDS - ZP_01220859.1 P3TCK_26310 putative tricarboxylic transport TctB 77565 78074 -1
CDS - ZP_01220860.1 P3TCK_26315 putative tricarboxylic transport TctC 78181 79173 -1
CDS - ZP_01220861.1 P3TCK_26320 putative pyruvate formate-lyase 1 activating enzyme 79479 80219 -1
CDS - ZP_01220862.1 P3TCK_26325 hypothetical protein 80465 81169 -1
CDS - ZP_01220863.1 P3TCK_26330 putative formate acetyltransferase 81368 83644 -1
CDS - ZP_01220864.1 P3TCK_26335 hypothetical integral membrane protein 83858 85372 -1
CDS - ZP_01220865.1 P3TCK_26340 hypothetical protein 85847 87583 -1
CDS - ZP_01220866.1 P3TCK_26345 hypothetical protein 88053 89420 1
CDS - ZP_01220867.1 P3TCK_26350 hypothetical membrane protein 89417 90898 1
CDS - ZP_01220868.1 P3TCK_26355 hypothetical transcriptional regulator, ArsR family protein 91056 91349 1
CDS - ZP_01220869.1 P3TCK_26360 hypothetical peptide ABC transporter, periplasmic peptide-binding protein 91365 93140 -1
CDS - ZP_01220870.1 P3TCK_26365 putative ABC-type histidine transport system, ATPase component 93252 94130 1
CDS - ZP_01220871.1 P3TCK_26370 putative amino acid ABC transporter, periplasmic amino acid-binding protein 94254 95030 1
CDS - ZP_01220872.1 P3TCK_26375 putative ABC-type arginine transport system, permease component 95142 95882 1
CDS - ZP_01220873.1 P3TCK_26380 putative ABC-type arginine/histidine transport system, permease component 95886 96563 1
CDS - ZP_01220874.1 P3TCK_26385 hypothetical glutaredoxin 2 96664 97314 -1
CDS - ZP_01220875.1 P3TCK_26390 putative exodeoxyribonuclease III 97389 98195 -1
CDS - ZP_01220876.1 P3TCK_26395 putative Na+/H+ antiporter 98387 99844 -1
CDS - ZP_01220877.1 P3TCK_26400 putative choline-glycine betaine transporter 100415 102328 1
CDS - ZP_01220878.1 P3TCK_26405 hypothetical protein 102442 103404 -1
CDS - ZP_01220879.1 P3TCK_26410 hypothetical protein 103791 103949 1
CDS - ZP_01220880.1 P3TCK_26415 tagD protein 104055 104558 -1