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Photobacterium profundum 3TCK, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
rRNA - - P3TCK_r13813 23S ribosomal RNA 1 472 1
rRNA - - P3TCK_r13811 5S ribosomal RNA 578 705 1
tRNA - - P3TCK_t13807 tRNA-Asp 800 873 1
CDS - ZP_01221121.1 P3TCK_13470 hypothetical protein 959 1345 -1
CDS - ZP_01221122.1 P3TCK_13475 putative phosphoglucomutase/phosphomannomutase 1746 3158 -1
CDS - ZP_01221123.1 P3TCK_13480 putative N,N-diacetylchitobiose phosphorylase 3223 5628 -1
CDS - ZP_01221124.1 P3TCK_13485 hypothetical N-acetyl-beta-hexosaminidase 5668 7599 -1
CDS - ZP_01221125.1 P3TCK_13490 putative N-acetylglucosamine kinase 7609 8496 -1
CDS - ZP_01221126.1 P3TCK_13495 putative endoglucanase-related protein 8489 10225 -1
CDS - ZP_01221127.1 P3TCK_13500 putative ABC-type oligopeptide transport system, ATPase component 10267 11262 -1
CDS - ZP_01221128.1 P3TCK_13505 putative peptide ABC transporter, ATP-binding protein 11292 12263 -1
CDS - ZP_01221129.1 P3TCK_13510 putative peptide ABC transporter, permease protein 12263 13291 -1
CDS - ZP_01221130.1 P3TCK_13515 putative peptide ABC transporter, permease protein 13294 14280 -1
CDS - ZP_01221131.1 P3TCK_13520 putative peptide ABC transporter, periplasmic peptide-binding protein 14422 16101 -1
CDS - ZP_01221132.1 P3TCK_13525 hypothetical sensory box sensor histidine kinase/response regulator 16868 20221 -1
CDS - ZP_01221133.1 P3TCK_13530 hypothetical 16S RNA G1207 methylase RsmC 20589 21608 -1
CDS - ZP_01221134.1 P3TCK_13535 putative permease 21732 22817 -1
CDS - ZP_01221135.1 P3TCK_13540 glutamate-1-semialdehyde aminotransferase 23237 24535 -1
CDS - ZP_01221136.1 P3TCK_13545 chloride channel protein 24776 26179 1
CDS - ZP_01221137.1 P3TCK_13550 putative HesB family protein 26240 26581 1
CDS - ZP_01221138.1 P3TCK_13555 hypothetical membrane protein 26690 27982 -1
CDS - ZP_01221139.1 P3TCK_13560 tyrosyl-tRNA synthetase 28142 29329 1
CDS - ZP_01221140.1 P3TCK_13565 hypothetical DedA family protein 29454 30068 1
CDS - ZP_01221141.1 P3TCK_13570 hypothetical protein 30174 30590 -1
CDS - ZP_01221142.1 P3TCK_13575 putative membrane protein 30752 31363 -1
CDS - ZP_01221143.1 P3TCK_13580 hypothetical protein 31485 32309 -1
CDS - ZP_01221144.1 P3TCK_13585 adenosylcobinamide-phosphate synthase 32310 33266 -1
CDS - ZP_01221145.1 P3TCK_13590 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 33266 33964 -1
CDS - ZP_01221146.1 P3TCK_13595 putative glutamate synthase, small subunit 34149 35561 -1
CDS - ZP_01221147.1 P3TCK_13600 putative glutamate synthase, large subunit 35577 40040 -1
CDS - ZP_01221148.1 P3TCK_13605 putative glutamate synthase, small subunit 40480 41952 -1
CDS - ZP_01221149.1 P3TCK_13610 putative glutamate synthase, large subunit 41945 46492 -1
CDS - ZP_01221150.1 P3TCK_13615 putative Fe-S oxidoreductase 47140 48084 1
CDS - ZP_01221151.1 P3TCK_13620 hypothetical sensory box/GGDEF family protein 48204 50030 1
CDS - ZP_01221152.1 P3TCK_13625 putative sensor histidine kinase FexB 50180 52576 1
CDS - ZP_01221153.1 P3TCK_13630 hypothetical protein 52573 53151 1
CDS - ZP_01221154.1 P3TCK_13635 putative aerobic respiration control protein FexA 53280 53999 -1
CDS - ZP_01221155.1 P3TCK_13640 hypothetical protein 54564 54794 1
CDS - ZP_01221156.1 P3TCK_13645 ribonuclease activity regulator protein RraA 54869 55360 1
CDS - ZP_01221157.1 P3TCK_13650 hypothetical protein 55460 55924 -1
CDS aceK ZP_01221158.1 P3TCK_13655 bifunctional isocitrate dehydrogenase kinase/phosphatase protein 56083 57810 -1
CDS thrA ZP_01221159.1 P3TCK_13660 bifunctional aspartokinase I/homeserine dehydrogenase I 58045 58116 1
CDS - ZP_01221160.1 P3TCK_13665 putative aspartokinase I/homoserine dehydrogenase 58258 60717 1
CDS - ZP_01221161.1 P3TCK_13670 homoserine kinase 60720 61676 1
CDS - ZP_01221162.1 P3TCK_13675 threonine synthase 61679 62965 1
CDS - ZP_01221163.1 P3TCK_13680 hypothetical sodium:dicarboxylate symporter 63031 64212 -1
CDS - ZP_01221164.1 P3TCK_13685 putative formate acetyl transferase-related protein 64516 64893 -1
CDS - ZP_01221165.1 P3TCK_13690 endonuclease IV 65234 66082 1
CDS - ZP_01221166.1 P3TCK_13695 uracil-DNA glycosylase 66262 66390 1
CDS - ZP_01221167.1 P3TCK_13700 putative uracil-DNA-glycosylase 66485 67168 1
CDS - ZP_01221168.1 P3TCK_13705 hypothetical protein 67316 67849 1
CDS - ZP_01221169.1 P3TCK_13710 hypothetical protein 67951 68133 -1
CDS - ZP_01221170.1 P3TCK_13715 putative sodium/alanine symporter 68778 70211 1
CDS - ZP_01221171.1 P3TCK_13720 hypothetical protein 70317 71096 1
CDS - ZP_01221172.1 P3TCK_13725 putative ATP-dependent RNA helicase SrmB 71239 72498 -1
CDS - ZP_01221173.1 P3TCK_13730 hypothetical O-methyltransferase 72691 73413 -1
CDS - ZP_01221174.1 P3TCK_13735 putative branched chain amino acid transport system II carrier protein 73848 75155 1
CDS - ZP_01221175.1 P3TCK_13740 flavodoxin 75253 75774 -1
CDS - ZP_01221176.1 P3TCK_13745 tyrosine recombinase 75988 76884 1
CDS - ZP_01221177.1 P3TCK_13750 hypothetical protein 77040 77762 1
CDS - ZP_01221178.1 P3TCK_13755 putative single-stranded-DNA-specific exonuclease RecJ 77934 78245 1
CDS - ZP_01221179.1 P3TCK_13760 putative single-stranded-DNA-specific exonuclease RecJ 78215 79660 1
CDS - ZP_01221180.1 P3TCK_13765 putative peptide chain release factor 2 79903 80964 1
CDS lysS ZP_01221181.1 P3TCK_13770 lysyl-tRNA synthetase 80997 82505 1
CDS - ZP_01221182.1 P3TCK_13775 putative Sodium/glutamate symporter 83041 84315 1
CDS - ZP_01221183.1 P3TCK_13780 putative sigma-54 dependent transcriptional regulator 84710 86044 1
CDS - ZP_01221184.1 P3TCK_13785 hypothetical protein 86531 86776 1
CDS - ZP_01221185.1 P3TCK_13790 putative oxidoreductase Tas, aldo/keto reductase family protein 87063 88097 -1
CDS - ZP_01221186.1 P3TCK_13795 hypothetical protein 88273 88575 1
CDS - ZP_01221187.1 P3TCK_13800 DNA mismatch repair protein 88634 89302 -1