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Photobacterium profundum 3TCK, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
tRNA - - P3TCK_t13470 tRNA-Gly 100 172 -1
tRNA - - P3TCK_t13468 tRNA-Met 205 278 -1
CDS - ZP_01221333.1 P3TCK_13106 oligoribonuclease 408 953 -1
CDS - ZP_01221334.1 P3TCK_13111 ribosome-associated GTPase 1033 2085 1
CDS - ZP_01221335.1 P3TCK_13116 phosphatidylserine decarboxylase 2296 3171 1
CDS - ZP_01221336.1 P3TCK_13121 putative transporter 3307 4722 1
CDS - ZP_01221337.1 P3TCK_13126 putative methyl-accepting chemotaxis protein 4993 6876 1
CDS - ZP_01221338.1 P3TCK_13131 putative carbonic anhydrase 7166 7891 1
CDS - ZP_01221339.1 P3TCK_13136 transporter, drug/metabolite exporter family protein 8076 8963 1
CDS - ZP_01221340.1 P3TCK_13141 lysyl-tRNA synthetase 9310 10281 -1
CDS - ZP_01221341.1 P3TCK_13146 fumarate reductase 10832 12643 1
CDS - ZP_01221342.1 P3TCK_13151 succinate dehydrogenase 12643 13383 1
CDS - ZP_01221343.1 P3TCK_13156 fumarate reductase subunit C 13386 13769 1
CDS - ZP_01221344.1 P3TCK_13161 fumarate reductase subunit D 13780 14142 1
CDS - ZP_01221345.1 P3TCK_13166 Uncharacterized protein conserved in bacteria 14227 15624 -1
CDS - ZP_01221346.1 P3TCK_13171 elongation factor P 15833 16399 -1
CDS - ZP_01221347.1 P3TCK_13176 hypothetical protein 16434 17456 1
CDS - ZP_01221348.1 P3TCK_13181 putative ribosomal protein S6 modification protein 17890 18795 1
CDS groEL ZP_01221349.1 P3TCK_13186 chaperonin GroEL 19878 20732 -1
CDS groEL ZP_01221350.1 P3TCK_13191 chaperonin GroEL 20753 21526 -1
CDS groES ZP_01221351.1 P3TCK_13196 co-chaperonin GroES 21568 21858 -1
CDS - ZP_01221352.1 P3TCK_13201 hypothetical protein 22111 23454 1
CDS - ZP_01221353.1 P3TCK_13206 putative FxsA protein 23585 24160 -1
CDS - ZP_01221354.1 P3TCK_13211 putative aspartate ammonia-lyase 24614 26074 1
CDS - ZP_01221355.1 P3TCK_13216 anaerobic C4-dicarboxylate transporter 26198 27505 1
CDS - ZP_01221356.1 P3TCK_13221 hypothetical protein 27720 27854 1
CDS - ZP_01221357.1 P3TCK_13226 putative transcriptional regulator, LysR family protein 27883 28965 1
CDS dsbD ZP_01221358.1 P3TCK_13231 thiol:disulfide interchange protein precursor 29115 31022 1
CDS - ZP_01221359.1 P3TCK_13236 putative transcriptional regulator, LuxR family protein 31228 31863 1
CDS - ZP_01221360.1 P3TCK_13241 putative Multiple antibiotic transporter 32166 32798 1
CDS - ZP_01221361.1 P3TCK_13246 hypothetical protein 33001 33267 1
CDS - ZP_01221362.1 P3TCK_13251 putative sodium/solute symporter 33278 34981 1
CDS - ZP_01221363.1 P3TCK_13256 putative Signal transduction histidinekinase 35102 38566 -1
CDS - ZP_01221364.1 P3TCK_13261 putative transport permease protein 38718 39995 -1
CDS - ZP_01221365.1 P3TCK_13266 hypothetical protein 40157 41959 1
CDS - ZP_01221366.1 P3TCK_13271 DNA polymerase III subunit epsilon 41962 42585 1
CDS - ZP_01221367.1 P3TCK_13276 acetyl-coenzyme A synthetase 42787 44736 1
CDS - ZP_01221368.1 P3TCK_13281 3-dehydroquinate dehydratase 45275 45727 1
CDS - ZP_01221369.1 P3TCK_13286 putative acetyl-CoA carboxylase, biotin carboxyl carrier protein 45755 46219 1
CDS - ZP_01221370.1 P3TCK_13291 acetyl-CoA carboxylase 46232 47575 1
CDS - ZP_01221371.1 P3TCK_13296 hypothetical protein 47828 48109 1
CDS - ZP_01221372.1 P3TCK_13301 putative sodium/pantothenate symporter 48102 49556 1
CDS - ZP_01221373.1 P3TCK_13306 ribosomal protein L11 methyltransferase 49728 50612 1
CDS - ZP_01221374.1 P3TCK_13311 putative Dihydrouridine synthase 50785 51750 1
CDS - ZP_01221375.1 P3TCK_13316 DNA-binding protein Fis 51774 52070 1
CDS - ZP_01221376.1 P3TCK_13321 hypothetical protein 52127 52369 -1
CDS - ZP_01221377.1 P3TCK_13326 transcriptional regulator, AraC family protein 52378 53181 -1
CDS - ZP_01221378.1 P3TCK_13331 transporter, drug/metabolite exporter family protein 53335 54297 1
CDS - ZP_01221379.1 P3TCK_13336 MalT protein regulator 54423 55595 -1
CDS - ZP_01221380.1 P3TCK_13341 PTS system, glucose-specific IIABC component 55661 57232 -1
CDS - ZP_01221381.1 P3TCK_13346 maltose regulon regulatory protein MalI 57538 58560 1
CDS - ZP_01221382.1 P3TCK_13351 hypothetical protein 58686 58967 -1
CDS - ZP_01221383.1 P3TCK_13356 hypothetical protein 59140 59346 1
CDS - ZP_01221384.1 P3TCK_13361 putative transcriptional regulator, MerR family protein 59372 59806 -1
CDS purH ZP_01221385.1 P3TCK_13366 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 60041 61633 1
CDS - ZP_01221386.1 P3TCK_13371 phosphoribosylamine--glycine ligase 61756 63045 1
CDS - ZP_01221387.1 P3TCK_13376 hypothetical protein 63184 63882 -1
CDS - ZP_01221388.1 P3TCK_13381 putative DNA-binding protein HU-alpha 63926 64198 -1
CDS - ZP_01221389.1 P3TCK_13386 hypothetical protein 64428 65483 1
CDS - ZP_01221390.1 P3TCK_13391 putative branched chain amino acid transporter 65544 66863 -1
CDS - ZP_01221391.1 P3TCK_13396 hypothetical protein 67430 68017 -1
CDS - ZP_01221392.1 P3TCK_13401 putative D-isomer specific 2-hydroxyacid dehydrogenase family protein 68086 68997 1
CDS - ZP_01221393.1 P3TCK_13406 hypothetical protein 69008 69595 1
CDS - ZP_01221394.1 P3TCK_13411 hypothetical protein 69681 71276 1
CDS - ZP_01221395.1 P3TCK_13416 putative phage glucose translocase 71276 71623 1
CDS - ZP_01221396.1 P3TCK_13421 WcaA protein 71623 72588 1
CDS - ZP_01221397.1 P3TCK_13426 uroporphyrinogen decarboxylase 72635 73702 -1
CDS nudC ZP_01221398.1 P3TCK_13431 NADH pyrophosphatase 73917 74693 -1
CDS - ZP_01221399.1 P3TCK_13436 putative regulator of sigma D 74898 75380 1
CDS - ZP_01221400.1 P3TCK_13441 DNA-directed RNA polymerase beta' subunit 75650 79864 -1
CDS - ZP_01221401.1 P3TCK_13446 DNA-directed RNA polymerase beta subunit 79962 83987 -1
CDS - ZP_01221402.1 P3TCK_13451 50S ribosomal protein L7/L12 84214 84579 -1
CDS rplJ ZP_01221403.1 P3TCK_13456 50S ribosomal protein L10 84640 85134 -1
CDS - ZP_01221404.1 P3TCK_13461 50S ribosomal protein L1 85394 85678 -1