xBASE Logo
About | Contact | Home

Photobacterium profundum 3TCK, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
rRNA - - P3TCK_r25608 23S ribosomal RNA 1 640 1
rRNA - - P3TCK_r25604 5S ribosomal RNA 746 873 1
rRNA - - P3TCK_r25606 5S ribosomal RNA 924 1038 1
tRNA - - P3TCK_t25602 tRNA-Asp 1072 1145 1
CDS - ZP_01221478.1 P3TCK_25220 hypothetical protein 1574 1876 1
CDS - ZP_01221479.1 P3TCK_25225 hypothetical multidrug resistance protein 1990 3186 1
CDS - ZP_01221480.1 P3TCK_25230 hypothetical protein 3274 3609 1
CDS - ZP_01221481.1 P3TCK_25235 putative 2,3,4, 5-tetrahydropyridine-2-carboxylateN-succinyltransferase 3702 4733 -1
CDS - ZP_01221482.1 P3TCK_25240 putative DNA damage-inducible gene in SOS regulon, dependent oncyclic AMP and H-NS 5036 5338 -1
CDS - ZP_01221483.1 P3TCK_25245 hypothetical protein 5422 6108 1
CDS - ZP_01221484.1 P3TCK_25250 hypothetical transcriptional regulator 6126 7016 -1
CDS - ZP_01221485.1 P3TCK_25255 hypothetical protein 7200 8177 1
CDS - ZP_01221486.1 P3TCK_25260 putative exodeoxyribonuclease V 8374 11838 1
CDS - ZP_01221487.1 P3TCK_25265 putative exodeoxyribonuclease V 12231 15914 1
CDS - ZP_01221488.1 P3TCK_25270 putative exodeoxyribonuclease V, 67 kDa subunit 15907 18012 1
CDS - ZP_01221489.1 P3TCK_25275 N-acetylglutamate synthase 18237 19562 -1
CDS - ZP_01221490.1 P3TCK_25280 hypothetical protein 19696 20124 1
CDS - ZP_01221491.1 P3TCK_25285 putative membrane-bound lytic murein transglycosylase A 20425 21528 1
CDS - ZP_01221492.1 P3TCK_25290 putative HesA/MoeB/ThiF family protein 21661 22473 1
CDS - ZP_01221493.1 P3TCK_25295 hypothetical protein 22593 23027 -1
CDS - ZP_01221494.1 P3TCK_25300 putative aminotransferase, class V 23042 24262 -1
CDS - ZP_01221495.1 P3TCK_25305 putative transcriptional regulator, LysR family protein 24702 25610 1
CDS - ZP_01221496.1 P3TCK_25310 hypothetical protein 25603 26313 1
CDS - ZP_01221497.1 P3TCK_25315 hypothetical protein 26303 26677 1
CDS - ZP_01221498.1 P3TCK_25320 putative SAM-dependentmethyltransferase 26687 27769 1
CDS - ZP_01221499.1 P3TCK_25325 putative exodeoxyribonuclease IX 27895 28671 -1
CDS - ZP_01221500.1 P3TCK_25330 hypothetical protein 28755 30128 -1
CDS - ZP_01221501.1 P3TCK_25335 hypothetical GGDEF domain family protein 30425 31984 -1
CDS - ZP_01221502.1 P3TCK_25340 hypothetical protein 32121 34400 -1
CDS - ZP_01221503.1 P3TCK_25345 hypothetical protein 34518 35363 -1
CDS - ZP_01221504.1 P3TCK_25350 SecY interacting protein Syd 35520 36074 1
CDS - ZP_01221505.1 P3TCK_25355 putative Zn-ribbon-containing protein 36077 36850 1
CDS - ZP_01221506.1 P3TCK_25360 hypothetical protein 36968 37243 -1
CDS - ZP_01221507.1 P3TCK_25365 hypothetical protein 37290 37520 -1
CDS - ZP_01221508.1 P3TCK_25370 hypothetical protein 38118 38312 1
CDS - ZP_01221509.1 P3TCK_25375 hypothetical protein 38792 38953 1
CDS - ZP_01221510.1 P3TCK_25380 hypothetical protein 39387 39530 1
CDS - ZP_01221511.1 P3TCK_25385 hypothetical protein 39583 39786 1
CDS - ZP_01221512.1 P3TCK_25390 hypothetical protein 39799 40113 -1
CDS - ZP_01221513.1 P3TCK_25395 hypothetical protein 40155 41201 -1
CDS - ZP_01221514.1 P3TCK_25400 hypothetical protein 41377 41697 1
CDS - ZP_01221515.1 P3TCK_25405 putative pseudouridine synthase Rlu family protein 41700 42434 1
CDS - ZP_01221516.1 P3TCK_25410 flavodoxin 42582 43037 1
CDS - ZP_01221517.1 P3TCK_25415 hypothetical protein 43083 43463 -1
CDS - ZP_01221518.1 P3TCK_25420 PII uridylyl-transferase 43652 46276 -1
CDS - ZP_01221519.1 P3TCK_25425 methionine aminopeptidase 46433 47260 -1
CDS - ZP_01221520.1 P3TCK_25430 30S ribosomal protein S2 47585 48313 1
CDS tsf ZP_01221521.1 P3TCK_25435 elongation factor Ts 48425 49270 1
CDS - ZP_01221522.1 P3TCK_25440 uridylate kinase 49370 50092 1
CDS frr ZP_01221523.1 P3TCK_25445 ribosome releasing factor 50236 50793 1
CDS - ZP_01221524.1 P3TCK_25450 putative undecaprenyl diphosphate synthase 50879 51643 1
CDS - ZP_01221525.1 P3TCK_25455 putative phosphatidate cytidylyltransferase 51756 52604 1
CDS - ZP_01221526.1 P3TCK_25460 1-deoxy-D-xylulose 5-phosphate reductoisomerase 52667 53860 1
CDS - ZP_01221527.1 P3TCK_25465 putative membrane-associated Zn-dependent protease 53863 55218 1
CDS - ZP_01221528.1 P3TCK_25470 putative surface antigen 55256 57676 1
CDS - ZP_01221529.1 P3TCK_25475 putative outer membrane protein OmpH 57696 58205 1
CDS - ZP_01221530.1 P3TCK_25480 putative UDP-3-O- glucosamine N-acyltransferase 58286 59311 1
CDS fabZ ZP_01221531.1 P3TCK_25485 (3R)-hydroxymyristoyl ACP dehydratase 59435 59887 1
CDS - ZP_01221532.1 P3TCK_25490 UDP-N-acetylglucosamine acyltransferase 59887 60675 1
CDS lpxB ZP_01221533.1 P3TCK_25495 lipid-A-disaccharide synthase 60675 61817 1
CDS rnhB ZP_01221534.1 P3TCK_25500 ribonuclease HII 61828 62433 1
CDS - ZP_01221535.1 P3TCK_25505 DNA polymerase III subunit alpha 62547 66023 1
CDS - ZP_01221536.1 P3TCK_25510 acetyl-CoA carboxylase alpha subunit 66119 67078 1
CDS - ZP_01221537.1 P3TCK_25515 hypothetical cell cycle protein MesJ 67210 68529 1
CDS - ZP_01221538.1 P3TCK_25520 putative cytochrome 68586 68897 1
CDS - ZP_01221539.1 P3TCK_25525 putative sodium-dependent transporter 69121 70470 1
CDS - ZP_01221540.1 P3TCK_25530 hypothetical protein 70554 70742 -1
CDS - ZP_01221541.1 P3TCK_25535 hypothetical protein 70745 70948 -1
CDS - ZP_01221542.1 P3TCK_25540 hypothetical protein 71080 71934 -1
CDS - ZP_01221543.1 P3TCK_25545 hypothetical protein 72027 73151 -1
CDS - ZP_01221544.1 P3TCK_25550 prolyl-tRNA synthetase 73407 75122 -1
CDS - ZP_01221545.1 P3TCK_25555 hypothetical protein 75214 75915 -1
CDS - ZP_01221546.1 P3TCK_25560 hypothetical protein 76050 76190 1
CDS - ZP_01221547.1 P3TCK_25565 putative lipoprotein YaeC 76285 77100 -1
CDS - ZP_01221548.1 P3TCK_25570 putative ABC-type metal ion transport system,permease component 77204 77890 -1
CDS - ZP_01221549.1 P3TCK_25575 putative ABC-type metal ion transport system, ATPase component 77880 78914 -1
CDS - ZP_01221550.1 P3TCK_25580 hypothetical protein 79212 79766 1
CDS - ZP_01221551.1 P3TCK_25585 putative transmembrane ABC transporter protein 80106 81131 1
CDS - ZP_01221552.1 P3TCK_25590 putative peptide ABC transporter,permease protein 81132 82175 1
CDS - ZP_01221553.1 P3TCK_25595 putative binding protein component ofABC transporter 82204 83995 1