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Photobacterium profundum 3TCK, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
rRNA - - P3TCK_r25940 23S ribosomal RNA 1 684 1
rRNA - - P3TCK_r25938 5S ribosomal RNA 790 917 1
tRNA - - P3TCK_t25912 tRNA-Asp 948 1021 1
CDS - ZP_01222030.1 P3TCK_25630 hypothetical protein 1057 1218 -1
tRNA - - P3TCK_t25914 tRNA-Trp 1061 1134 1
CDS - ZP_01222031.1 P3TCK_25635 hypothetical protein 1583 1918 1
CDS - ZP_01222032.1 P3TCK_25640 hypothetical protein 1998 2849 1
CDS - ZP_01222033.1 P3TCK_25645 hypothetical protein 2830 3519 -1
CDS - ZP_01222034.1 P3TCK_25650 hypothetical membrane-bound lytic murein transglycosylase D 3516 5087 -1
CDS - ZP_01222035.1 P3TCK_25655 putative hydroxyacylglutathione hydrolase GloB 5158 5916 -1
CDS - ZP_01222036.1 P3TCK_25660 hypothetical SAM-dependent methyltransferase 5958 6701 1
CDS - ZP_01222037.1 P3TCK_25665 putative ribonuclease HI 6760 7230 -1
CDS - ZP_01222038.1 P3TCK_25670 DNA polymerase III subunit epsilon 7270 8010 1
CDS - ZP_01222039.1 P3TCK_25675 hypothetical protein 8018 9259 1
CDS - ZP_01222040.1 P3TCK_25680 putative oxidoreductase, acyl-CoA dehydrogenase family protein 9368 11848 -1
CDS - ZP_01222041.1 P3TCK_25685 hypothetical sulfate permease family protein 12323 14050 1
CDS - ZP_01222042.1 P3TCK_25690 phosphoheptose isomerase 14115 14693 1
CDS - ZP_01222043.1 P3TCK_25695 putative amidotransferase 14755 15534 1
CDS - ZP_01222044.1 P3TCK_25700 putative phosphoribosylglycinamide formyltransferase 2 15596 16240 -1
CDS - ZP_01222045.1 P3TCK_25705 phosphoribosylaminoimidazole synthetase 16245 17285 -1
CDS - ZP_01222046.1 P3TCK_25710 uracil phosphoribosyltransferase 17475 18101 1
CDS - ZP_01222047.1 P3TCK_25715 putative uracil permease 18197 19450 -1
CDS - ZP_01222048.1 P3TCK_25720 hypothetical protein 19746 20966 1
CDS - ZP_01222049.1 P3TCK_25725 Conserved hypothetical membrane protein 21027 21461 -1
CDS - ZP_01222050.1 P3TCK_25730 putative Trp repressor-binding protein 21506 22090 -1
CDS - ZP_01222051.1 P3TCK_25735 Putative arsenate reductase ArsC 22090 22440 -1
CDS - ZP_01222052.1 P3TCK_25740 hypothetical Zn-dependent protease 22592 24049 -1
CDS - ZP_01222053.1 P3TCK_25745 hypothetical protein 24234 24461 1
CDS - ZP_01222054.1 P3TCK_25750 putative permease PerM 24471 25541 1
CDS bcp ZP_01222055.1 P3TCK_25755 bacterioferritin comigratory protein 25635 26105 -1
CDS - ZP_01222056.1 P3TCK_25760 hypothetical glycine cleavage system transcriptional repressor 26171 26710 -1
CDS dapA ZP_01222057.1 P3TCK_25765 dihydrodipicolinate synthase 26973 27854 1
CDS - ZP_01222058.1 P3TCK_25770 hypothetical lipoprotein-34 NlpB 27886 28914 1
CDS - ZP_01222059.1 P3TCK_25775 lipoyl synthase 29006 29974 -1
CDS lipB ZP_01222060.1 P3TCK_25780 lipoyltransferase 29977 30558 -1
CDS - ZP_01222061.1 P3TCK_25785 hypothetical protein 30776 31102 -1
CDS - ZP_01222062.1 P3TCK_25790 putative D-alanyl-D-alanine carboxypeptidase 31240 32415 -1
CDS - ZP_01222063.1 P3TCK_25795 hypothetical rare lipoprotein A 32577 33482 -1
CDS - ZP_01222064.1 P3TCK_25800 putative rod shape-determining protein RodA 33483 34604 -1
CDS - ZP_01222065.1 P3TCK_25805 putative penicillin-binding protein 2 34601 36544 -1
CDS - ZP_01222066.1 P3TCK_25810 hypothetical protein 36551 37021 -1
CDS - ZP_01222067.1 P3TCK_25815 hypothetical protein 37028 37345 -1
CDS - ZP_01222068.1 P3TCK_25820 DNA polymerase III subunit delta 37567 38598 -1
CDS - ZP_01222069.1 P3TCK_25825 hypothetical rare lipoprotein B 38595 39308 -1
CDS leuS ZP_01222070.1 P3TCK_25830 leucyl-tRNA synthetase 39476 42052 -1
CDS - ZP_01222071.1 P3TCK_25835 hypothetical protein 42240 42722 1
CDS - ZP_01222072.1 P3TCK_25840 hypothetical protein 42825 43502 -1
CDS - ZP_01222073.1 P3TCK_25845 apolipoprotein N-acyltransferase 43592 45145 -1
CDS - ZP_01222074.1 P3TCK_25850 putative hemolysin 45148 46020 -1
CDS - ZP_01222075.1 P3TCK_25855 hypothetical protein 46122 46586 -1
CDS - ZP_01222076.1 P3TCK_25860 putative phoH family protein 46593 47654 -1
CDS - ZP_01222077.1 P3TCK_25865 putative 2-methylthioadenine synthetase 47769 49193 -1
CDS - ZP_01222078.1 P3TCK_25870 hypothetical transglycosylase 49450 50088 -1
CDS - ZP_01222079.1 P3TCK_25875 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 50324 51484 1
tRNA - - P3TCK_t25936 tRNA-Leu 51690 51771 -1
CDS - ZP_01222080.1 P3TCK_25880 hypothetical protein 51852 51971 1
tRNA - - P3TCK_t25934 tRNA-Gln 51858 51929 -1
tRNA - - P3TCK_t25932 tRNA-Leu 52003 52084 -1
tRNA - - P3TCK_t25930 tRNA-Leu 52205 52286 -1
tRNA - - P3TCK_t25928 tRNA-Met 52335 52408 -1
CDS - ZP_01222081.1 P3TCK_25885 Putative RNA 52470 52718 1
tRNA - - P3TCK_t25926 tRNA-Gln 52476 52547 -1
tRNA - - P3TCK_t25924 tRNA-Leu 52591 52672 -1
tRNA - - P3TCK_t25922 tRNA-Met 52725 52798 -1
CDS - ZP_01222082.1 P3TCK_25890 Putative RNA 52863 53111 1
tRNA - - P3TCK_t25920 tRNA-Gln 52869 52940 -1
tRNA - - P3TCK_t25918 tRNA-Leu 52984 53065 -1
tRNA - - P3TCK_t25916 tRNA-Met 53118 53191 -1
CDS - ZP_01222083.1 P3TCK_25895 putative GTP-binding protein 53497 54588 -1
CDS - ZP_01222084.1 P3TCK_25900 peptidyl-tRNA hydrolase 54692 55282 -1
CDS - ZP_01222085.1 P3TCK_25905 hypothetical protein 55414 56050 -1