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Photobacterium profundum 3TCK, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
rRNA - - P3TCK_r23468 23S ribosomal RNA 1 687 1
rRNA - - P3TCK_r23466 5S ribosomal RNA 793 920 1
CDS - ZP_01222202.1 P3TCK_23244 putative membrane protein 1504 2868 -1
CDS - ZP_01222203.1 P3TCK_23249 glutathione reductase 3182 4537 -1
CDS - ZP_01222204.1 P3TCK_23254 Protein involved in catabolism of external DNA 4712 5551 -1
CDS - ZP_01222205.1 P3TCK_23259 putative oligopeptidase A 5808 7850 1
CDS - ZP_01222206.1 P3TCK_23264 putative exopolyphosphatase 7939 9438 -1
CDS - ZP_01222207.1 P3TCK_23269 ATP-dependent RNA helicase 9445 10758 -1
CDS - ZP_01222208.1 P3TCK_23274 putative thioredoxin 10872 11198 1
CDS rho ZP_01222209.1 P3TCK_23279 transcription termination factor Rho 11395 12660 1
CDS - ZP_01222210.1 P3TCK_23284 hypothetical protein 12963 13940 1
CDS - ZP_01222211.1 P3TCK_23289 putative 3-polyprenyl-4-hydroxybenzoate decarboxylase 14129 16024 1
CDS - ZP_01222212.1 P3TCK_23294 ferredoxin 16044 16325 1
CDS - ZP_01222213.1 P3TCK_23299 NAD(P)H-flavin reductase 16353 17063 1
CDS - ZP_01222214.1 P3TCK_23304 putative transcriptional regulator AsnC 17215 17676 -1
CDS - ZP_01222215.1 P3TCK_23309 hypothetical sensory box/GGDEF family protein 17843 20992 1
CDS - ZP_01222216.1 P3TCK_23314 hypothetical protein 21098 21868 1
CDS - ZP_01222217.1 P3TCK_23319 hypothetical protein 21918 22409 1
CDS - ZP_01222218.1 P3TCK_23324 hypothetical HemY protein 22772 23959 -1
CDS - ZP_01222219.1 P3TCK_23329 hypothetical uroporphyrin-III C-methyltransferase 23956 25239 -1
CDS - ZP_01222220.1 P3TCK_23334 hypothetical uroporphyrinogen III synthase 25244 25999 -1
CDS - ZP_01222221.1 P3TCK_23339 porphobilinogen deaminase 25999 27024 -1
CDS - ZP_01222222.1 P3TCK_23344 putative adenylate cyclase 27328 29901 1
CDS cyaY ZP_01222223.1 P3TCK_23349 frataxin-like protein 29990 30301 -1
CDS - ZP_01222224.1 P3TCK_23354 hypothetical protein 30380 30562 1
CDS - ZP_01222225.1 P3TCK_23359 putative diaminopimelate decarboxylase 30613 31863 1
CDS dapF ZP_01222226.1 P3TCK_23364 diaminopimelate epimerase 31900 32730 1
CDS - ZP_01222227.1 P3TCK_23369 hypothetical protein 32727 33428 1
CDS - ZP_01222228.1 P3TCK_23374 tyrosine recombinase 33425 34339 1
CDS - ZP_01222229.1 P3TCK_23379 hypothetical protein 34456 35175 1
CDS - ZP_01222230.1 P3TCK_23384 putative transmembrane protein 35267 35725 -1
CDS - ZP_01222231.1 P3TCK_23389 hypothetical protein 35725 36501 -1
CDS - ZP_01222232.1 P3TCK_23394 hypothetical protein 36479 37339 -1
CDS - ZP_01222233.1 P3TCK_23399 putative signal peptide protein 37344 37601 -1
CDS - ZP_01222234.1 P3TCK_23404 putative signal peptide protein 37668 37928 -1
CDS - ZP_01222235.1 P3TCK_23409 putative ATP-dependent DNA helicase Rep 38216 40390 1
CDS - ZP_01222236.1 P3TCK_23414 putative gamma-glutamyltranspeptidase 40514 42268 -1
CDS - ZP_01222237.1 P3TCK_23419 hypothetical threonine efflux protein 42419 43075 -1
CDS - ZP_01222238.1 P3TCK_23424 hypothetical transcriptional regulator, AraC/XylS family protein 43216 44010 -1
CDS - ZP_01222239.1 P3TCK_23429 putative RarD 44138 45049 -1
CDS - ZP_01222240.1 P3TCK_23434 putative ATP-dependent DNA helicase RecQ 45331 47178 1
CDS - ZP_01222241.1 P3TCK_23439 hypothetical gene 3 protein-related protein 47478 47813 1
CDS - ZP_01222242.1 P3TCK_23444 hypothetical protein 48008 48715 1
CDS - ZP_01222243.1 P3TCK_23449 hypothetical protein 48792 49241 1
CDS - ZP_01222244.1 P3TCK_23454 putative sigma cross-reacting protein 27A 49503 50153 -1
CDS - ZP_01222245.1 P3TCK_23459 DNA polymerase I 50540 53308 1