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Propionibacterium acnes J139, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_06262295.1 HMPREF9206_0865 transcriptional regulator, AsnC family 288 1298 -1
CDS - ZP_06262296.1 HMPREF9206_0866 dihydrodipicolinate reductase, N-terminal domain protein 1592 2635 1
CDS - ZP_06262297.1 HMPREF9206_0867 conserved hypothetical protein 2647 2994 1
CDS - ZP_06262298.1 HMPREF9206_0868 pyridoxal-phosphate dependent protein 2991 4412 1
CDS - ZP_06262299.1 HMPREF9206_0869 conserved hypothetical protein 4412 4834 1
CDS - ZP_06262300.1 HMPREF9206_0870 B12 binding domain protein 4831 7131 1
CDS - ZP_06262301.1 HMPREF9206_0871 conserved hypothetical protein 7137 8567 1
CDS - ZP_06262302.1 HMPREF9206_0872 alanine racemase, N-terminal domain protein 8564 9652 1
CDS - ZP_06262303.1 HMPREF9206_0873 amino acid permease 9691 11166 1
CDS - ZP_06262304.1 HMPREF9206_0874 amino acid permease 11578 13044 1
CDS alr ZP_06262305.1 HMPREF9206_0875 alanine racemase 13271 14398 1
CDS - ZP_06262306.1 HMPREF9206_0876 putative phosphoglucomutase, alpha-D-glucose phosphate-specific 14608 16032 -1
CDS - ZP_06262307.1 HMPREF9206_0877 GHMP kinase, N-terminal domain protein 16148 17338 -1
CDS - ZP_06262308.1 HMPREF9206_0878 nucleotidyl transferase 17335 18171 -1
CDS - ZP_06262309.1 HMPREF9206_0879 conserved hypothetical protein 18297 19124 1
CDS - ZP_06262310.1 HMPREF9206_0880 conserved domain protein 19339 20220 -1
CDS fumC ZP_06262311.1 HMPREF9206_0881 fumarate hydratase, class II 20470 21876 1
CDS - ZP_06262312.1 HMPREF9206_0882 ABC transporter, permease protein 22097 23008 -1
CDS - ZP_06262313.1 HMPREF9206_0883 ABC transporter, permease protein 23010 23918 -1
CDS - ZP_06262314.1 HMPREF9206_0884 bacterial extracellular solute-binding protein 24141 25475 -1
CDS - ZP_06262315.1 HMPREF9206_0885 transcriptional regulator, LacI family 25672 26679 1
CDS - ZP_06262316.1 HMPREF9206_0886 conserved hypothetical protein 26688 27380 -1
CDS - ZP_06262317.1 HMPREF9206_0887 transporter, small conductance mechanosensitive ion channel (MscS) family protein 27506 28363 1
CDS - ZP_06262318.1 HMPREF9206_0888 glycerate kinase 28533 29741 -1
CDS - ZP_06262319.1 HMPREF9206_0889 conserved hypothetical protein 29792 30046 1
CDS - ZP_06262320.1 HMPREF9206_0890 tRNA adenylyltransferase 30152 31651 1
CDS - ZP_06262321.1 HMPREF9206_0891 conserved hypothetical protein 31694 33835 1
CDS - ZP_06262322.1 HMPREF9206_0892 conserved hypothetical protein 33909 35714 1
CDS glpK ZP_06262323.1 HMPREF9206_0893 glycerol kinase 36068 37615 -1
CDS glpF ZP_06262324.1 HMPREF9206_0894 glycerol uptake facilitator 37676 38428 -1
CDS - ZP_06262325.1 HMPREF9206_0895 transcriptional regulator, sugar-binding family 38596 39564 1
CDS - ZP_06262326.1 HMPREF9206_0896 trypsin 39635 41050 -1
CDS - ZP_06262327.1 HMPREF9206_0897 conserved hypothetical protein 41261 41497 -1
CDS trxB ZP_06262328.1 HMPREF9206_0898 thioredoxin-disulfide reductase 41983 43035 1
CDS - ZP_06262329.1 HMPREF9206_0899 RNA pseudouridine synthase 43626 44471 -1
CDS - ZP_06262330.1 HMPREF9206_0900 transporter, major facilitator family protein 44840 46087 1
CDS - ZP_06262331.1 HMPREF9206_0901 hydrolase, alpha/beta domain protein 46089 47018 1
CDS - ZP_06262332.1 HMPREF9206_0902 OsmC-like protein 47141 47578 -1
CDS trxA_1 ZP_06262333.1 HMPREF9206_0903 thioredoxin 47587 47913 -1
CDS - ZP_06262334.1 HMPREF9206_0904 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminal domain protein 48164 49222 -1
CDS - ZP_06262335.1 HMPREF9206_0905 conserved hypothetical protein 49355 50329 -1
CDS tkt ZP_06262336.1 HMPREF9206_0906 transketolase 50349 52406 -1
CDS araB ZP_06262337.1 HMPREF9206_0907 ribulokinase 52543 54252 -1
CDS - ZP_06262338.1 HMPREF9206_0908 3-dehydroquinate synthase 54325 55689 -1
CDS - ZP_06262339.1 HMPREF9206_0909 FGGY-family pentulose kinase 55673 57277 -1
CDS - ZP_06262340.1 HMPREF9206_0910 HAD hydrolase, family IIA 57334 58191 -1
CDS - ZP_06262341.1 HMPREF9206_0911 putative membrane protein 58214 59293 -1
CDS - ZP_06262342.1 HMPREF9206_0912 putative ribose 5-phosphate isomerase 59439 59921 -1
CDS - ZP_06262343.1 HMPREF9206_0913 L-ribulose-5-phosphate 4-epimerase 60137 60805 -1
CDS - ZP_06262344.1 HMPREF9206_0914 glycerol-3-phosphate responsive antiterminator 60865 61431 -1
CDS - ZP_06262345.1 HMPREF9206_0915 putative L-ribulose-5-phosphate 4-epimerase 61497 62147 -1
CDS pdxB_1 ZP_06262346.1 HMPREF9206_0916 4-phosphoerythronate dehydrogenase 62162 63211 -1
CDS - ZP_06262347.1 HMPREF9206_0917 carbohydrate kinase, FGGY family protein 63198 63944 -1
CDS - ZP_06262348.1 HMPREF9206_0918 carbohydrate kinase, FGGY family protein 63947 64786 -1
CDS - ZP_06262349.1 HMPREF9206_0919 transcriptional regulator, DeoR family 64959 65765 -1
CDS - ZP_06262350.1 HMPREF9206_0920 hypothetical protein 65821 65982 -1
CDS uxuA ZP_06262351.1 HMPREF9206_0921 mannonate dehydratase 66040 67113 -1
CDS - ZP_06262352.1 HMPREF9206_0922 mannitol dehydrogenase C-terminal domain protein 67116 68705 -1
CDS uxaC ZP_06262353.1 HMPREF9206_0923 glucuronate isomerase 68721 70142 -1
CDS - ZP_06262354.1 HMPREF9206_0924 periplasmic binding protein and sugar binding domain of the LacI family protein 70198 71205 -1
CDS - ZP_06262355.1 HMPREF9206_0925 transporter, major facilitator family protein 71382 72806 1
CDS - ZP_06262356.1 HMPREF9206_0926 glycosyl hydrolase, family 31 72826 75318 1
CDS - ZP_06262357.1 HMPREF9206_0927 glycosyl hydrolase family 2, TIM barrel domain protein 75351 77132 1
CDS - ZP_06262358.1 HMPREF9206_0928 conserved hypothetical protein 77236 80637 1
CDS - ZP_06262359.1 HMPREF9206_0929 conserved hypothetical protein 80897 81607 1
CDS - ZP_06262360.1 HMPREF9206_0930 aminotransferase, class I/II 82434 83780 1
CDS - ZP_06262361.1 HMPREF9206_0931 D-ala D-ala ligase N-terminal domain protein 84111 84704 1
CDS - ZP_06262362.1 HMPREF9206_0932 conserved domain protein 84767 85057 1
CDS - ZP_06262363.1 HMPREF9206_0933 conserved hypothetical protein 85032 85766 1
CDS - ZP_06262364.1 HMPREF9206_0934 conserved hypothetical protein 85775 86335 1
CDS - ZP_06262365.1 HMPREF9206_0935 ParB-like protein 86594 87514 -1
CDS - ZP_06262366.1 HMPREF9206_0936 putative chromosome partitioning protein ParA 87517 88503 -1
CDS - ZP_06262367.1 HMPREF9206_0937 conserved hypothetical protein 90176 90301 1
CDS gidB ZP_06262368.1 HMPREF9206_0938 16S rRNA methyltransferase GidB 90331 90957 -1
CDS - ZP_06262369.1 HMPREF9206_0939 alanine racemase, N-terminal domain protein 93005 94033 -1
CDS - ZP_06262370.1 HMPREF9206_0940 FemAB family protein 94035 95162 -1
CDS - ZP_06262371.1 HMPREF9206_0941 conserved hypothetical protein 95171 95368 -1
CDS - ZP_06262372.1 HMPREF9206_0942 R3H domain protein 95372 95983 -1
CDS yidC ZP_06262373.1 HMPREF9206_0943 membrane protein insertase, YidC/Oxa1 family 96036 97115 -1
CDS - ZP_06262374.1 HMPREF9206_0944 putative ribonuclease P protein component 97588 98034 -1
CDS rpmH ZP_06262375.1 HMPREF9206_0945 ribosomal protein L34 98041 98175 -1
CDS dnaA ZP_06262376.1 HMPREF9206_0946 chromosomal replication initiator protein DnaA 98535 100037 1
CDS dnaN ZP_06262377.1 HMPREF9206_0947 DNA polymerase III, beta subunit 100510 101670 1
CDS - ZP_06262378.1 HMPREF9206_0948 conserved hypothetical protein 101807 102460 1
CDS recF ZP_06262379.1 HMPREF9206_0949 DNA replication and repair protein RecF 102518 103702 1
CDS - ZP_06262380.1 HMPREF9206_0950 conserved hypothetical protein 103695 104288 1
CDS - ZP_06262381.1 HMPREF9206_0951 conserved domain protein 104352 104561 -1
CDS manA_1 ZP_06262382.1 HMPREF9206_0952 mannose-6-phosphate isomerase, class I 104926 106113 1
CDS gyrB ZP_06262383.1 HMPREF9206_0953 DNA gyrase, B subunit 106355 108427 1
CDS gyrA ZP_06262384.1 HMPREF9206_0954 DNA gyrase, A subunit 108469 111144 1
CDS - ZP_06262385.1 HMPREF9206_0955 conserved hypothetical protein 111137 111769 1
CDS - ZP_06262386.1 HMPREF9206_0956 lactate/malate dehydrogenase, NAD binding domain protein 111868 112863 -1
CDS - ZP_06262387.1 HMPREF9206_0957 conserved hypothetical protein 113267 113401 1
CDS - ZP_06262388.1 HMPREF9206_0958 periplasmic binding protein and sugar binding domain of the LacI family protein 113527 114534 1
CDS - ZP_06262389.1 HMPREF9206_0959 ABC transporter, ATP-binding protein 114531 116036 1
CDS - ZP_06262390.1 HMPREF9206_0960 amino acid or sugar ABC transport system, permease protein 116117 117094 1
CDS - ZP_06262391.1 HMPREF9206_0961 periplasmic binding protein and sugar binding domain of the LacI family protein 117143 118084 1
CDS - ZP_06262392.1 HMPREF9206_0962 putative ribokinase 118081 119010 1
CDS - ZP_06262393.1 HMPREF9206_0963 RbsD/FucU transport family protein 119007 119390 1
tRNA - - HMPREF9206_0964 tRNA-Ile 119485 119558 1