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Propionibacterium acnes J139, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS tyrS ZP_06263885.1 HMPREF9206_0001 tyrosine--tRNA ligase 96 1352 -1
CDS argR ZP_06263886.1 HMPREF9206_0002 arginine repressor 1436 1984 -1
CDS - ZP_06263887.1 HMPREF9206_0003 transcriptional regulator, TetR family 2080 2691 -1
CDS bioB ZP_06263888.1 HMPREF9206_0004 biotin synthase 2704 3870 1
CDS pheT ZP_06263889.1 HMPREF9206_0005 phenylalanyl-tRNA synthetase, beta subunit 4112 6631 -1
CDS pheS ZP_06263890.1 HMPREF9206_0006 phenylalanyl-tRNA synthetase, alpha subunit 6628 7737 -1
CDS - ZP_06263891.1 HMPREF9206_0007 RNA methyltransferase, TrmH family 7860 8675 -1
CDS rplT ZP_06263892.1 HMPREF9206_0008 ribosomal protein L20 8683 9054 -1
CDS rpmI ZP_06263893.1 HMPREF9206_0009 ribosomal protein L35 9158 9364 -1
CDS infC ZP_06263894.1 HMPREF9206_0010 translation initiation factor IF-3 9465 10106 -1
CDS - ZP_06263895.1 HMPREF9206_0011 conserved hypothetical protein 10460 10933 -1
CDS - ZP_06263896.1 HMPREF9206_0012 conserved hypothetical protein 11018 11617 1
CDS hisG ZP_06263897.1 HMPREF9206_0013 ATP phosphoribosyltransferase 11679 12533 -1
CDS hisE ZP_06263898.1 HMPREF9206_0014 phosphoribosyl-ATP diphosphatase 12591 12857 -1
CDS pnuC ZP_06263899.1 HMPREF9206_0015 nicotinamide mononucleotide transporter PnuC 12924 13595 -1
CDS - ZP_06263900.1 HMPREF9206_0016 conserved hypothetical protein 13664 14458 -1
CDS - ZP_06263901.1 HMPREF9206_0017 conserved hypothetical protein 14461 15042 -1
CDS - ZP_06263902.1 HMPREF9206_0018 oxidoreductase, aldo/keto reductase family protein 15251 16219 1
CDS gltA ZP_06263903.1 HMPREF9206_0019 citrate (Si)-synthase 16231 17541 -1
CDS - ZP_06263904.1 HMPREF9206_0020 peptidase dimerization domain protein 17541 18905 -1
tRNA - - HMPREF9206_0021 tRNA-Leu 19045 19133 1
CDS - ZP_06263905.1 HMPREF9206_0022 hydrolase, alpha/beta domain protein 19712 20845 1
CDS - ZP_06263906.1 HMPREF9206_0023 CsbD-like protein 21064 21279 1
CDS dprA ZP_06263907.1 HMPREF9206_0024 DNA protecting protein DprA 21806 22939 -1
CDS - ZP_06263908.1 HMPREF9206_0025 Mg chelatase-like protein 22936 24459 -1
CDS - ZP_06263909.1 HMPREF9206_0026 conserved hypothetical protein 24456 24878 -1
CDS - ZP_06263910.1 HMPREF9206_0027 conserved hypothetical protein 25142 25453 -1
CDS rnhB ZP_06263911.1 HMPREF9206_0028 ribonuclease HII 25450 26103 -1
CDS lepB ZP_06263912.1 HMPREF9206_0029 signal peptidase I 26100 26924 -1
CDS rplS ZP_06263913.1 HMPREF9206_0030 ribosomal protein L19 27095 27448 -1
CDS - ZP_06263914.1 HMPREF9206_0031 hypothetical protein 27481 27678 1
CDS - ZP_06263915.1 HMPREF9206_0032 succinate dehydrogenase/fumarate reductase iron-sulfur subunit 27699 28472 -1
CDS sdhA ZP_06263916.1 HMPREF9206_0033 succinate dehydrogenase flavoprotein subunit 28469 30496 -1
CDS sdhC ZP_06263917.1 HMPREF9206_0034 succinate dehydrogenase (or fumarate reductase) cytochrome B subunit, b558 family 30496 31176 -1
CDS trmD ZP_06263918.1 HMPREF9206_0035 tRNA (guanine-N(1)-)-methyltransferase 31357 32082 -1
CDS rimM ZP_06263919.1 HMPREF9206_0036 16S rRNA processing protein RimM 32079 32618 -1
CDS - ZP_06263920.1 HMPREF9206_0037 conserved hypothetical protein 32726 33004 -1
CDS rpsP ZP_06263921.1 HMPREF9206_0038 ribosomal protein S16 33007 33450 -1
CDS - ZP_06263922.1 HMPREF9206_0039 amidohydrolase family protein 33641 34804 -1
CDS ffh ZP_06263923.1 HMPREF9206_0040 signal recognition particle protein 34881 36467 -1
CDS - ZP_06263924.1 HMPREF9206_0041 conserved hypothetical protein 36543 37724 -1
CDS ftsY ZP_06263925.1 HMPREF9206_0042 signal recognition particle-docking protein FtsY 37735 38925 -1
CDS - ZP_06263926.1 HMPREF9206_0043 hypothetical protein 38976 39143 -1
CDS - ZP_06263927.1 HMPREF9206_0044 conserved hypothetical protein 39203 39817 -1
CDS - ZP_06263928.1 HMPREF9206_0045 hypothetical protein 40227 40370 1
CDS - ZP_06263929.1 HMPREF9206_0046 toxin-antitoxin system, antitoxin component, HicB family 40472 40813 1
CDS - ZP_06263930.1 HMPREF9206_0048 conserved hypothetical protein 40948 41199 1
CDS mutM ZP_06263931.1 HMPREF9206_0047 DNA-formamidopyrimidine glycosylase 41150 41992 -1
CDS rnc ZP_06263932.1 HMPREF9206_0049 ribonuclease III 41985 42725 -1
CDS rpmF ZP_06263933.1 HMPREF9206_0050 ribosomal protein L32 42736 42927 -1
CDS - ZP_06263934.1 HMPREF9206_0051 conserved hypothetical protein 42991 43551 -1
CDS - ZP_06263935.1 HMPREF9206_0052 bacterial extracellular solute-binding protein 43814 45124 1
CDS - ZP_06263936.1 HMPREF9206_0053 ABC transporter, permease protein 45204 46160 1
CDS - ZP_06263937.1 HMPREF9206_0054 ABC transporter, permease protein 46157 47053 1
CDS - ZP_06263938.1 HMPREF9206_0055 transcriptional regulator, LacI family 47074 48084 -1
CDS - ZP_06263939.1 HMPREF9206_0056 conserved domain protein 48407 48724 1
CDS - ZP_06263940.1 HMPREF9206_0057 glycosyl hydrolase family 38 N-terminal domain protein 49036 52119 1
CDS - ZP_06263941.1 HMPREF9206_0058 conserved hypothetical protein 52116 53315 1
CDS - ZP_06263942.1 HMPREF9206_0059 conserved hypothetical protein 53377 53592 1
CDS coaD ZP_06263943.1 HMPREF9206_0060 pantetheine-phosphate adenylyltransferase 53801 54274 -1
CDS - ZP_06263944.1 HMPREF9206_0061 RNA methyltransferase, RsmD family 54271 54879 -1
CDS - ZP_06263945.1 HMPREF9206_0062 hypothetical protein 54876 54998 -1
CDS - ZP_06263946.1 HMPREF9206_0063 pyridoxamine 5'-phosphate oxidase family protein 55016 55438 1
CDS - ZP_06263947.1 HMPREF9206_0064 putative ATP-dependent DNA helicase RecG 55542 57791 -1
CDS rpmB ZP_06263948.1 HMPREF9206_0065 ribosomal protein L28 57841 58026 -1
CDS - ZP_06263949.1 HMPREF9206_0066 conserved hypothetical protein 58168 59859 -1
CDS - ZP_06263950.1 HMPREF9206_0067 thiamine pyrophosphate enzyme, N-terminal TPP binding domain protein 60308 62047 -1
CDS - ZP_06263951.1 HMPREF9206_0068 conserved hypothetical protein 62155 62910 -1
CDS dapB ZP_06263952.1 HMPREF9206_0069 dihydrodipicolinate reductase 62987 63727 -1
CDS gpsI ZP_06263953.1 HMPREF9206_0070 guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase 63894 66095 -1
CDS rpsO ZP_06263954.1 HMPREF9206_0071 ribosomal protein S15 66416 66679 -1
CDS ribF ZP_06263955.1 HMPREF9206_0072 riboflavin biosynthesis protein RibF 66919 67815 -1
CDS - ZP_06263956.1 HMPREF9206_0073 ABC transporter, substrate-binding protein, QAT family 67967 68974 -1
CDS - ZP_06263957.1 HMPREF9206_0074 ABC transporter, permease protein 69017 69883 -1
CDS proV ZP_06263958.1 HMPREF9206_0075 glycine betaine/L-proline transport ATP binding subunit 69889 71196 -1
CDS truB ZP_06263959.1 HMPREF9206_0076 tRNA pseudouridine synthase B 71527 72414 -1
CDS - ZP_06263960.1 HMPREF9206_0077 cupin domain protein 72467 72793 -1
CDS - ZP_06263961.1 HMPREF9206_0078 conserved hypothetical protein 72834 72992 -1
CDS - ZP_06263962.1 HMPREF9206_0079 PRD domain protein 73900 75117 1
CDS - ZP_06263963.1 HMPREF9206_0080 conserved domain protein 75098 75823 1
CDS gutM ZP_06263964.1 HMPREF9206_0081 glucitol operon activator protein 75823 76326 1
CDS - ZP_06263965.1 HMPREF9206_0082 PTS system, glucitol/sorbitol-specific, IIC component 76416 76994 1
CDS srlE ZP_06263966.1 HMPREF9206_0083 PTS system, glucitol/sorbitol-specific, IIBC component 76996 78045 1
CDS - ZP_06263967.1 HMPREF9206_0084 PTS system, glucitol/sorbitol-specific, IIA component 78073 78441 1
CDS - ZP_06263968.1 HMPREF9206_0085 phosphocarrier, HPr family 78438 78737 1
CDS - ZP_06263969.1 HMPREF9206_0086 3-dehydroquinate synthase 78734 80113 1
CDS rbfA ZP_06263970.1 HMPREF9206_0087 ribosome-binding factor A 80188 80619 -1
CDS - ZP_06263971.1 HMPREF9206_0088 putative membrane protein 80700 81311 -1
CDS - ZP_06263972.1 HMPREF9206_0089 putative type IV conjugative transfer system protein TraL 81308 82480 -1
CDS - ZP_06263973.1 HMPREF9206_0090 ABC transporter, ATP-binding protein 82477 83280 -1
CDS infB ZP_06263974.1 HMPREF9206_0091 translation initiation factor IF-2 83946 86840 -1
CDS nusA ZP_06263975.1 HMPREF9206_0093 transcription termination factor NusA 87390 88361 -1
CDS - ZP_06263976.1 HMPREF9206_0094 conserved hypothetical protein 88363 88962 -1
CDS - ZP_06263977.1 HMPREF9206_0095 putative lipoprotein 89028 89990 1
CDS - ZP_06263978.1 HMPREF9206_0096 putative membrane protein 90021 90788 -1
CDS - ZP_06263979.1 HMPREF9206_0097 putative metallophosphoesterase 90874 92625 -1
CDS proS ZP_06263980.1 HMPREF9206_0098 proline--tRNA ligase 92786 94543 -1
CDS - ZP_06263981.1 HMPREF9206_0099 putative ABC transporter-associated repeat protein 94714 97407 1
CDS - ZP_06263982.1 HMPREF9206_0100 anchored repeat ABC transporter, substrate-binding protein 97404 98927 1
CDS - ZP_06263983.1 HMPREF9206_0101 actinobacterial surface-anchored protein domain protein 98936 99958 1