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Pseudoalteromonas tunicata D2, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_01135603.1 PTD2_16266 putative sodium:alanine symporter 376 1788 1
CDS - ZP_01135604.1 PTD2_16271 sensor protein RstB 1960 3243 -1
CDS - ZP_01135605.1 PTD2_16276 transcriptional regulatory protein RstA 3247 3984 -1
CDS - ZP_01135606.1 PTD2_16281 serine-type D-Ala-D-Ala carboxypeptidase 4013 5197 -1
CDS - ZP_01135607.1 PTD2_16286 hypothetical protein 5397 5831 -1
CDS - ZP_01135608.1 PTD2_16291 hypothetical protein 5821 6573 -1
CDS - ZP_01135609.1 PTD2_16296 60 kDa chaperonin (Protein Cpn60) (groEL protein) 7010 8653 -1
CDS - ZP_01135610.1 PTD2_16301 10 kDa chaperonin (Protein Cpn10) (groES protein) 8725 9012 -1
CDS - ZP_01135611.1 PTD2_16306 putative FxsA protein 9123 9629 -1
CDS - ZP_01135612.1 PTD2_16311 periplasmic divalent cation tolerance protein (C-type cytochrome biogenesis protein) 9768 10109 1
CDS dsbD ZP_01135613.1 PTD2_16316 thiol:disulfide interchange protein precursor 10109 11923 1
CDS - ZP_01135614.1 PTD2_16321 3-dehydroquinate dehydratase (3-dehydroquinase) (Type II DHQase) 12120 12575 1
CDS - ZP_01135615.1 PTD2_16326 Biotin carboxyl carrier protein of acetyl-CoA carboxylase (BCCP) 12602 13066 1
CDS - ZP_01135616.1 PTD2_16331 acetyl-CoA carboxylase 13092 14432 1
tRNA - - PTD2_t16953 tRNA-Met 14662 14735 1
CDS - ZP_01135617.1 PTD2_16336 putative sodium/hydrogen antiporter 15071 16909 1
CDS - ZP_01135618.1 PTD2_16341 methyl-accepting chemotaxis protein 17034 19154 -1
CDS - ZP_01135619.1 PTD2_16346 putative acetyltransferase 19266 19820 -1
CDS - ZP_01135620.1 PTD2_16351 glutathione peroxidase precursor 19955 20482 1
CDS - ZP_01135621.1 PTD2_16356 hypothetical protein 20574 20741 1
CDS - ZP_01135622.1 PTD2_16361 peptidyl-prolyl cis-trans isomerase C (rotamase C) 20854 21132 1
CDS - ZP_01135623.1 PTD2_16366 hypothetical protein 21512 21859 1
CDS - ZP_01135624.1 PTD2_16371 acetyltransferase, GNAT family protein 21926 22483 1
CDS - ZP_01135625.1 PTD2_16376 putative oxidoreductase 22487 23821 1
CDS - ZP_01135626.1 PTD2_16381 putative orphan protein 23922 24560 1
CDS - ZP_01135627.1 PTD2_16386 putative Aminopeptidase 24650 27229 1
CDS - ZP_01135628.1 PTD2_16391 putative orphan protein; putative signal peptide 27329 28207 -1
CDS - ZP_01135629.1 PTD2_16396 phosphoribulokinase 28326 29225 1
CDS - ZP_01135630.1 PTD2_16401 S-adenosylmethionine decarboxylase, proenzyme 29272 30084 -1
CDS - ZP_01135631.1 PTD2_16406 hypothetical protein 30190 30594 -1
CDS - ZP_01135632.1 PTD2_16411 hypothetical protein 30703 31053 -1
CDS - ZP_01135633.1 PTD2_16416 succinylglutamic semialdehyde dehydrogenase 31180 32646 -1
CDS - ZP_01135634.1 PTD2_16421 arginine succinyltransferase 32665 33735 -1
CDS argD ZP_01135635.1 PTD2_16426 bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein 33757 34965 -1
CDS - ZP_01135636.1 PTD2_16431 putative glutamine amidotransferase 35539 36120 -1
CDS - ZP_01135637.1 PTD2_16436 tryptophanyl-tRNA synthetase 36185 37189 -1
CDS - ZP_01135638.1 PTD2_16441 D-ribulose-5-phosphate 3-epimerase 37304 37975 -1
CDS - ZP_01135639.1 PTD2_16446 hypothetical protein 38155 38472 1
CDS - ZP_01135640.1 PTD2_16451 hypothetical protein 38474 38656 1
CDS - ZP_01135641.1 PTD2_16456 DNA adenine methylase 38671 39486 -1
CDS - ZP_01135642.1 PTD2_16461 hypothetical protein 39540 40976 -1
CDS - ZP_01135643.1 PTD2_16466 dehydroquinate synthase 40966 42045 -1
CDS - ZP_01135644.1 PTD2_16471 shikimate kinase I 42065 42583 -1
CDS - ZP_01135645.1 PTD2_16476 putative type IV pilus biogenesis protein PilQ (cytoplasmic ATPase) 42735 44714 -1
CDS - ZP_01135646.1 PTD2_16481 putative Type IV pilus biogenesis protein PilP 44797 45330 -1
CDS - ZP_01135647.1 PTD2_16486 putative Type IV pilus biogenesis protein PilO 45330 45929 -1
CDS - ZP_01135648.1 PTD2_16491 putative Type IV pilus biogenesis protein PilN 45926 46492 -1
CDS - ZP_01135649.1 PTD2_16496 putative Type IV pilus biogenesis protein PilM 46480 47559 -1
CDS - ZP_01135650.1 PTD2_16501 Murein polymerase 47695 50157 1
CDS metL ZP_01135651.1 PTD2_16506 bifunctional aspartate kinase II/homoserine dehydrogenase II 50217 52562 -1
CDS - ZP_01135652.1 PTD2_16511 cystathionine gamma-synthase, PLP-dependent 52569 53834 -1
CDS - ZP_01135653.1 PTD2_16516 transcriptional repressor protein MetJ 54079 54402 1
CDS - ZP_01135654.1 PTD2_16521 putative NADP-dependent malic enzyme (NADP-dependent malic oxidoreductase (N-terminal); phosphotransacetylase 54445 55686 -1
CDS - ZP_01135655.1 PTD2_16526 coproporphyrinogen III oxidase 56285 57655 1
CDS - ZP_01135656.1 PTD2_16531 hypothetical protein 57721 58218 -1
CDS - ZP_01135657.1 PTD2_16536 hypothetical protein 58215 58793 -1
CDS - ZP_01135658.1 PTD2_16541 methyltransferase-related protein 58849 59487 -1
CDS - ZP_01135659.1 PTD2_16546 hypothetical protein 59743 59844 -1
CDS - ZP_01135660.1 PTD2_16551 conserved hypothetcial protein 60405 60701 -1
CDS - ZP_01135661.1 PTD2_16556 RNA-directed DNA polymerase (Reverse transcriptase) 60865 62154 -1
CDS - ZP_01135662.1 PTD2_16561 hypothetical protein 62247 62375 -1
CDS - ZP_01135663.1 PTD2_16566 hypothetical protein 62657 63187 -1
CDS - ZP_01135664.1 PTD2_16571 putative cysteine desulfurase 63404 64639 -1
CDS - ZP_01135665.1 PTD2_16576 putative biofilm formation, controlled by quorum sensing, formation of cell aggregates 64652 65284 -1
CDS - ZP_01135666.1 PTD2_16581 hypothetical protein 65335 65424 1
CDS - ZP_01135667.1 PTD2_16586 putative secreted hydrolase 65597 68053 1
CDS - ZP_01135668.1 PTD2_16591 putative response regulator in two-component regulatory system 68241 68945 1
CDS - ZP_01135669.1 PTD2_16596 hypothetical protein 68975 70720 -1
CDS - ZP_01135670.1 PTD2_16601 putative regulator 70772 72289 -1
CDS - ZP_01135671.1 PTD2_16606 hypothetical protein 72458 72907 -1
CDS - ZP_01135672.1 PTD2_16611 hypothetical protein 72924 74294 -1
CDS - ZP_01135673.1 PTD2_16616 hypothetical protein 74904 75518 -1
CDS - ZP_01135674.1 PTD2_16621 hypothetical protein 75644 76642 -1
CDS - ZP_01135675.1 PTD2_16626 hypothetical protein 76644 77597 -1
CDS - ZP_01135676.1 PTD2_16631 chitinase 77647 81156 -1
CDS - ZP_01135677.1 PTD2_16636 two-component response regulator 81624 82574 -1
CDS - ZP_01135678.1 PTD2_16641 3-isopropylmalate isomerase, subunit with LeuC 82742 83338 -1
CDS - ZP_01135679.1 PTD2_16646 3-isopropylmalate isomerase, subunit with LeuD 83338 84738 -1
CDS - ZP_01135680.1 PTD2_16651 3-isopropylmalate dehydrogenase 84793 85869 -1
CDS - ZP_01135681.1 PTD2_16656 2-isopropylmalate synthase 85866 87413 -1
CDS - ZP_01135682.1 PTD2_16661 Signaling protein with DMT-family integral membrane sensor domain, GGDEF and EAL domains 87833 88957 -1
CDS - ZP_01135683.1 PTD2_16666 hypothetical protein 89301 89906 1
CDS - ZP_01135684.1 PTD2_16671 hypothetical protein 89921 90418 1
CDS - ZP_01135685.1 PTD2_16676 hypothetical protein 90427 91239 1
CDS - ZP_01135686.1 PTD2_16681 periplasmic protein, disulfide bond formation 91285 91917 -1
CDS - ZP_01135687.1 PTD2_16686 periplasmic protein, disulfide bond formation 91944 92573 -1
CDS - ZP_01135688.1 PTD2_16691 hypothetical protein 92580 93554 -1
CDS - ZP_01135689.1 PTD2_16696 hypothetical protein 93615 95039 -1
CDS - ZP_01135690.1 PTD2_16701 putative orphan protein 95243 95596 1
CDS - ZP_01135691.1 PTD2_16706 hypothetical protein 95597 95800 1
CDS - ZP_01135692.1 PTD2_16711 putative orphan protein 95866 96495 -1
CDS - ZP_01135693.1 PTD2_16716 putative general secretion pathway protein N 96510 97268 -1
CDS - ZP_01135694.1 PTD2_16721 putative general secretion pathway protein M 97270 97737 -1
CDS - ZP_01135695.1 PTD2_16726 putative general secretion pathway protein L 97734 98939 -1
CDS - ZP_01135696.1 PTD2_16731 putative general secretion pathway protein 98936 99934 -1
CDS - ZP_01135697.1 PTD2_16736 putative general secretion pathway protein J (Precursor) 99934 100539 -1
CDS - ZP_01135698.1 PTD2_16741 putative general secretion pathway protein I (precursor) 100536 100946 -1
CDS - ZP_01135699.1 PTD2_16746 putative general secretion pathway protein H precursor 100943 101521 -1
CDS - ZP_01135700.1 PTD2_16751 putative general secretion pathway protein G (Precursor) 101546 101971 -1
CDS - ZP_01135701.1 PTD2_16756 putative general secretion pathway protein F 102008 103225 -1