xBASE Logo
About | Contact | Home

Pseudomonas fluorescens WH6 WH6_1, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_07772626.1 PFWH6_0001 hypothetical protein 1 1518 1
CDS - EFQ66092.1 PFWH6_0001 - 1 1518 1
CDS dnaN ZP_07772627.1 PFWH6_0002 DNA polymerase III beta subunit 1557 2660 1
CDS dnaN EFQ66093.1 PFWH6_0002 - 1557 2660 1
CDS recF ZP_07772628.1 PFWH6_0003 DNA replication and repair protein recF 2681 3784 1
CDS recF EFQ66094.1 PFWH6_0003 - 2681 3784 1
CDS gyrB ZP_07772629.1 PFWH6_0004 DNA topoisomerase II:ATP-binding region 3789 6206 1
CDS gyrB EFQ66095.1 PFWH6_0004 - 3789 6206 1
CDS - ZP_07772630.1 PFWH6_0005 DNA-binding response regulator 6314 7036 -1
CDS - EFQ66096.1 PFWH6_0005 - 6314 7036 -1
CDS - ZP_07772631.1 PFWH6_0006 CHASE domain/sensory box histidine kinase 7484 9766 1
CDS - EFQ66097.1 PFWH6_0006 - 7484 9766 1
CDS - ZP_07772632.1 PFWH6_0007 hypothetical protein 9784 9891 1
CDS - EFQ66098.1 PFWH6_0007 - 9784 9891 1
CDS - ZP_07772633.1 PFWH6_0008 1-acyl-sn-glycerol-3-phosphate acyltransferase 9945 10763 -1
CDS - EFQ66099.1 PFWH6_0008 - 9945 10763 -1
CDS yaeD ZP_07772634.1 PFWH6_0009 histidinol-phosphate phosphatase 10799 11335 -1
CDS yaeD EFQ66100.1 PFWH6_0009 - 10799 11335 -1
CDS glyS ZP_07772635.1 PFWH6_0010 Glycyl-tRNA synthetase beta subunit 11338 13392 -1
CDS glyS EFQ66101.1 PFWH6_0010 - 11338 13392 -1
CDS glyQ ZP_07772636.1 PFWH6_0011 glycyl-tRNA synthetase alpha subunit 13389 14342 -1
CDS glyQ EFQ66102.1 PFWH6_0011 - 13389 14342 -1
CDS tag EFQ66103.1 PFWH6_0012 - 14424 14981 1
CDS tag ZP_07772637.1 PFWH6_0012 DNA-3-methyladenine glycosylase I 14424 14981 1
CDS ddg ZP_07772638.1 PFWH6_0013 lipid A biosynthesis lauroyl acyltransferase 15022 15909 1
CDS ddg EFQ66104.1 PFWH6_0013 - 15022 15909 1
CDS - ZP_07772639.1 PFWH6_0014 hypothetical protein 15957 16268 -1
CDS - EFQ66105.1 PFWH6_0014 - 15957 16268 -1
CDS trkA ZP_07772640.1 PFWH6_0015 potassium uptake protein 16287 17660 -1
CDS trkA EFQ66106.1 PFWH6_0015 - 16287 17660 -1
CDS sun ZP_07772641.1 PFWH6_0016 rRNA SAM-dependent methyltransferase 17683 18993 -1
CDS sun EFQ66107.1 PFWH6_0016 - 17683 18993 -1
CDS fmt ZP_07772642.1 PFWH6_0017 Methionyl-tRNA formyltransferase 18990 19943 -1
CDS fmt EFQ66108.1 PFWH6_0017 - 18990 19943 -1
CDS def ZP_07772643.1 PFWH6_0018 peptide deformylase 20013 20651 -1
CDS def EFQ66109.1 PFWH6_0018 - 20013 20651 -1
CDS - ZP_07772644.1 PFWH6_0019 peptidoglycan-binding LysM 20655 21431 1
CDS - EFQ66110.1 PFWH6_0019 - 20655 21431 1
CDS smf EFQ66111.1 PFWH6_0020 - 21495 22598 1
CDS smf ZP_07772645.1 PFWH6_0020 DNA processing protein 21495 22598 1
CDS yrdC ZP_07772646.1 PFWH6_0021 SUA5/YciO/YrdC-like probable translation factor 22674 23231 1
CDS yrdC EFQ66112.1 PFWH6_0021 - 22674 23231 1
CDS qor ZP_07772647.1 PFWH6_0022 NADPH2:quinone reductase 23380 24357 -1
CDS qor EFQ66113.1 PFWH6_0022 - 23380 24357 -1
CDS - ZP_07772648.1 PFWH6_0023 hypothetical protein 24403 24507 -1
CDS - EFQ66114.1 PFWH6_0023 - 24403 24507 -1
CDS hemF ZP_07772649.1 PFWH6_0024 Coproporphyrinogen-3 oxidase 24517 25449 1
CDS hemF EFQ66115.1 PFWH6_0024 - 24517 25449 1
CDS aroE ZP_07772650.1 PFWH6_0025 shikimate/quinate 5-dehydrogenase 25449 26267 1
CDS aroE EFQ66116.1 PFWH6_0025 - 25449 26267 1
CDS - ZP_07772651.1 PFWH6_0026 sulfate transporter 26302 27870 -1
CDS - EFQ66117.1 PFWH6_0026 - 26302 27870 -1
CDS - ZP_07772652.1 PFWH6_0027 substrate-binding region of ABC-type glycine betaine transport system 27970 28884 -1
CDS - EFQ66118.1 PFWH6_0027 - 27970 28884 -1
CDS yidJ ZP_07772653.1 PFWH6_0028 choline-sulfatase 28901 30415 -1
CDS yidJ EFQ66119.1 PFWH6_0028 - 28901 30415 -1
CDS gcvA ZP_07772654.1 PFWH6_0029 transcriptional regulator, LysR family 30519 31469 1
CDS gcvA EFQ66120.1 PFWH6_0029 - 30519 31469 1
CDS - ZP_07772655.1 PFWH6_0030 DOPA 4,5-dioxygenase 31483 31827 1
CDS - EFQ66121.1 PFWH6_0030 - 31483 31827 1
CDS dgoK ZP_07772656.1 PFWH6_0031 2-dehydro-3-deoxygalactonokinase 31993 32952 1
CDS dgoK EFQ66122.1 PFWH6_0031 - 31993 32952 1
CDS dgoA ZP_07772657.1 PFWH6_0032 2-dehydro-3-deoxyphosphogluconate aldolase 32954 33574 1
CDS dgoA EFQ66123.1 PFWH6_0032 - 32954 33574 1
CDS - ZP_07772658.1 PFWH6_0033 galactonate dehydratase 33623 34771 1
CDS - EFQ66124.1 PFWH6_0033 - 33623 34771 1
CDS dgoT ZP_07772659.1 PFWH6_0034 D-galactonate transporter 34887 36197 1
CDS dgoT EFQ66125.1 PFWH6_0034 - 34887 36197 1
CDS trpB ZP_07772660.1 PFWH6_0035 tryptophan synthase beta chain 37045 38271 -1
CDS trpB EFQ66126.1 PFWH6_0035 - 37045 38271 -1
CDS trpI ZP_07772661.1 PFWH6_0036 HTH-type transcriptional regulator 38383 39279 1
CDS trpI EFQ66127.1 PFWH6_0036 - 38383 39279 1
CDS - ZP_07772662.1 PFWH6_0037 hypothetical protein 39288 39614 -1
CDS - EFQ66128.1 PFWH6_0037 - 39288 39614 -1
CDS - ZP_07772663.1 PFWH6_0038 protein of unknown function DUF1458 39772 39987 1
CDS - EFQ66129.1 PFWH6_0038 - 39772 39987 1
CDS - ZP_07772664.1 PFWH6_0039 protein of unknown function DUF1161 40103 40327 1
CDS - EFQ66130.1 PFWH6_0039 - 40103 40327 1
CDS yhbW ZP_07772665.1 PFWH6_0040 luciferase-like protein 40395 41396 -1
CDS yhbW EFQ66131.1 PFWH6_0040 - 40395 41396 -1
CDS osmC ZP_07772666.1 PFWH6_0041 hydroperoxide resistance protein 41614 42045 1
CDS osmC EFQ66132.1 PFWH6_0041 - 41614 42045 1
CDS - ZP_07772667.1 PFWH6_0042 protein of unknown function DUF1161 42201 42440 1
CDS - EFQ66133.1 PFWH6_0042 - 42201 42440 1
CDS - ZP_07772668.1 PFWH6_0043 lipoprotein 42441 42863 -1
CDS - EFQ66134.1 PFWH6_0043 - 42441 42863 -1
CDS - ZP_07772669.1 PFWH6_0044 hypothetical protein 42938 43981 1
CDS - EFQ66135.1 PFWH6_0044 - 42938 43981 1
CDS - ZP_07772670.1 PFWH6_0045 HAD-superfamily hydrolase 44092 44751 -1
CDS - EFQ66136.1 PFWH6_0045 - 44092 44751 -1
CDS yrdA ZP_07772671.1 PFWH6_0046 transferase hexapeptide repeat-containing protein 44748 45290 -1
CDS yrdA EFQ66137.1 PFWH6_0046 - 44748 45290 -1
CDS prlC ZP_07772672.1 PFWH6_0047 peptidase 45383 47443 1
CDS prlC EFQ66138.1 PFWH6_0047 - 45383 47443 1
CDS - ZP_07772673.1 PFWH6_0048 hypothetical protein 47440 47715 1
CDS - EFQ66139.1 PFWH6_0048 - 47440 47715 1
CDS - ZP_07772674.1 PFWH6_0049 gluconate 2-dehydrogenase gamma chain 47960 48712 1
CDS - EFQ66140.1 PFWH6_0049 - 47960 48712 1
CDS - ZP_07772675.1 PFWH6_0050 glucose-methanol-choline oxidoreductase 48727 50499 1
CDS - EFQ66141.1 PFWH6_0050 - 48727 50499 1