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Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS repA NP_521562.1 RSp0001 REPA replicase protein 1219 2244 1
CDS cspD3 NP_521563.1 RSp0002 cold shock-like transcription regulator protein 3120 3323 -1
CDS parA NP_521564.1 RSp0003 partition protein 3728 4396 1
CDS parB NP_521565.1 RSp0004 putative partitioning protein 4393 5397 1
CDS RSp0005 NP_521566.1 RS01977 hypothetical protein 5712 6545 1
CDS galU2 NP_521567.1 RSp0006 UTP--glucose-1-phosphate uridylyltransferase UDP-glucose pyrophosphorylase protein 6803 7768 1
CDS kgtP2 NP_521568.1 RSp0007 putative alpha-ketoglutarate permease transmembrane protein 8031 9374 1
CDS dctB1 NP_521569.1 RSp0008 C4-dicarboxylate transport sensor kinase transcription regulator protein 9390 11294 1
CDS dctD1 NP_521570.1 RSp0009 response regulator of the C4-dicarboxylate transport two-component regulatory system transcription regulator protein 11287 12651 1
CDS RSp0010 NP_521571.1 RS01982 putative lipoprotein transmembrane 12657 13454 -1
CDS RSp0011 NP_521572.1 RS01983 putative signal peptide protein 13625 14056 1
CDS RSp0012 NP_521573.1 RS01984 hypothetical protein 14151 16847 1
CDS RSp0013 NP_521574.1 RS01985 amino acid-binding periplasmic (PBP) ABC transporter protein 17329 18489 1
CDS RSp0014 NP_521575.1 RS01986 amino-acid transmembrane lipoprotein ABC transporter 18586 19467 1
CDS RSp0015 NP_521576.1 RS01987 amino-acid transmembrane ABC transporter protein 19478 20377 1
CDS RSp0016 NP_521577.1 RS01988 amino-acid ATP-binding ABC transporter protein 20385 21182 1
CDS RSp0017 NP_521578.1 RS01989 amino-acid ATP-binding ABC transporter protein 21179 21904 1
CDS RSp0018 NP_521579.1 RS01990 transcriptional regulator transcription regulator protein 21974 22882 -1
CDS RSp0019 NP_521580.1 RS01991 hypothetical protein 23310 23657 1
CDS RSp0020 NP_521581.1 RS01992 putative voltage-gated ClC-type chloride channel ClcB 23682 25067 1
CDS RSp0021 NP_521582.1 RS01993 hypothetical protein 25610 25756 -1
CDS RSp0022 NP_521583.1 RS01995 hypothetical protein 25942 26130 1
CDS RSp0023 NP_521584.1 RS01997 putative signal peptide protein 26809 27570 1
CDS RSp0024 NP_521585.1 RS01998 hypothetical protein 27854 28333 -1
CDS RSp0025 NP_521586.1 RS06177 hypothetical protein 28901 29251 1
CDS RSp0026 NP_521587.1 RS02001 hypothetical protein 29423 29677 1
CDS mntH NP_521588.1 RSp0027 putative manganese transport transmembrane protein 29714 31357 1
CDS RSp0028 NP_521589.1 RS02003 GALA protein 31773 33329 1
CDS RSp0029 NP_521590.1 RS02004 putative HNS-like transcription regulator protein 33799 34086 -1
CDS RSp0030 NP_521591.1 RS02005 oxacillin hydrolase 34899 35717 1
CDS RSp0031 NP_521592.1 RS02006 hypothetical protein 35950 36597 -1
CDS RSp0032 NP_521593.1 RS02007 salicylyl-CoA 5-hydroxylase 36813 39170 1
CDS RSp0033 NP_521594.1 RS02008 oxidoreductase protein 39172 39945 1
CDS RSp0034 NP_521595.1 RS02009 putative transcription regulator protein 39942 40547 1
CDS RSp0035 NP_521596.1 RS02010 enoyl-CoA hydratase 40544 41395 1
CDS RSp0036 NP_521597.1 RS02011 acyl-CoA dehydrogenase oxidoreductase protein 41397 42596 1
CDS RSp0037 NP_521598.1 RS02012 acetyl-coenzyme A synthetase 42623 44242 1
CDS RSp0038 NP_521599.1 RS02013 putative 4-hydroxybenzoyl-COA thioesterase protein 44239 44649 1
CDS RSp0039 NP_521600.1 RS02014 hypothetical protein 44677 45069 1
CDS RSp0040 NP_521601.1 RS02015 hypothetical protein 45308 45877 1
CDS TIS1421a NP_521602.1 RSp0041 TIS1421-transposase protein A 45892 46296 1
CDS TIS1421b NP_521603.1 RSp0042 TIS1421-transposase protein B 46308 46694 1
CDS RSp0043 NP_521604.1 RS02018 hypothetical protein 46820 47560 1
CDS RSp0044 NP_521605.1 RS02019 transcription regulator protein 47522 48685 -1
CDS sdaA1 NP_521606.1 RSp0045 L-serine dehydratase 48980 50365 1
CDS soxB1 NP_521607.1 RSp0046 sarcosine oxidase subunit beta 50382 51626 1
CDS soxD1 NP_521608.1 RSp0047 sarcosine oxidase subunit delta 51651 51974 1
CDS soxA1 NP_521609.1 RSp0048 sarcosine oxidase subunit alpha 51971 55057 1
CDS soxG1 NP_521610.1 RSp0049 sarcosine oxidase subunit gamma 55047 55679 1
CDS folB1 NP_521611.1 RSp0050 dihydroneopterin aldolase protein 55676 56122 1
CDS RSp0051 NP_521612.1 RS02026 porin signal peptide protein 56288 57436 1
CDS RSp0052 NP_521613.1 RS02027 metabolite transporter 57520 58950 -1
CDS fdhA NP_521614.1 RSp0053 glutathione-independent formaldehyde dehydrogenase oxidoreductase protein 59223 60419 1
CDS RSp0054 NP_521615.1 RS02029 transcriptional regulator transcription regulator protein 60513 61544 -1
CDS glyA2 NP_521616.1 RSp0055 serine hydroxymethyltransferase 62005 63279 1
CDS RSp0056 NP_521617.1 RS02031 putative dipeptidase protein 63310 64281 1
CDS RSp0057 NP_521618.1 RS02032 hypothetical protein 64420 64953 1
CDS stcD NP_521619.1 RSp0058 stachydrine utilization oxidoreductase protein 65014 67077 1
CDS RSp0059 NP_521620.1 RS02034 hypothetical protein 67080 69005 1
CDS eftA NP_521621.1 RSp0060 putative electron transfer flavoprotein alpha-subunit (alpha-ETF) 69010 70188 1
CDS eftB NP_521622.1 RSp0061 putative electron transfer flavoprotein beta-subunit 70185 70970 1
CDS RSp0062 NP_521623.1 RS02037 putative dioxygenase (alpha subunit) oxidoreductase protein 71023 72267 1
CDS RSp0063 NP_521624.1 RS02038 ferredoxin oxidoreductase protein 72289 73437 1
CDS opuC NP_521625.1 RSp0064 putative glycine betaine transmembrane and periplasmic ABC transporter protein 73543 74412 1
CDS purU2 NP_521626.1 RSp0065 formyltetrahydrofolate deformylase 74491 75363 -1
CDS opuA NP_521627.1 RSp0066 putative glycine betaine/L-proline ATP-binding ABC transporter protein 75830 76987 1
CDS RSp0067 NP_521628.1 RS02042 transmembrane ABC transporter protein 76980 77876 1
CDS RSp0068 NP_521629.1 RS02043 transcriptional regulator transcription regulator protein 77997 79001 1
CDS adhC1 NP_521630.1 RSp0069 bifunctional: glutathione-dependent formaldehyde dehydrogenase/alcohol dehydrogenase class III 79046 80152 1
CDS RSp0070 NP_521631.1 RS02045 putative formate dehydrogenase oxidoreductase protein 80177 82471 1
CDS RSp0071 NP_521632.1 RS02048 hypothetical protein 82946 83227 -1
CDS RSp0072 NP_521633.1 RS02049 hypothetical protein 83358 83642 -1
CDS RSp0073 NP_521634.1 RS05558 remnant of a transposase gene protein 84046 84171 1
CDS RSp0074 NP_521635.1 RS02050 putative signal peptide protein 84331 84999 1
CDS kgtP1 NP_521636.1 RSp0075 putative alpha-ketoglutarate permease transmembrane protein 85102 86415 -1
CDS RSp0076 NP_521637.1 RS05545 hypothetical protein 86628 86927 -1
CDS RSp0077 NP_521638.1 RS05544 hypothetical protein 86930 87157 -1
CDS RSp0078 NP_521639.1 RS05543 hypothetical protein 87313 88512 -1
CDS RSp0079 NP_521640.1 RS05542 putative DNA-binding transcriptional regulatory transcription regulator protein 88639 89460 -1
CDS RSp0080 NP_521641.1 RS05541 hypothetical protein 89638 90189 -1
CDS RSp0081 NP_521642.1 RS05540 hypothetical protein 90322 90921 1
CDS RSp0082 NP_521643.1 RS05556 hypothetical protein 91012 91242 -1
CDS RSp0083 NP_521644.1 RS05555 hypothetical protein 91662 91955 -1
CDS RSp0084 NP_521645.1 RS05553 hypothetical protein 92146 92337 -1
CDS RSp0085 NP_521646.1 RS05538 putative RHS-related protein 92483 94939 1
CDS RSp0086 NP_521647.1 RS05537 putative RHS-related protein 95092 97386 1
CDS RSp0087 NP_521648.1 RS05535 hypothetical protein 97426 97950 1
CDS RSp0088 NP_521649.1 RS05533 hypothetical protein 98007 98552 -1
CDS RSp0089 NP_521650.1 RS05532 hypothetical protein 98557 98748 1
CDS xerC NP_521651.1 RS05531 site-specific tyrosine recombinase XerC 98795 99838 1
CDS RSp0091 NP_521652.1 RS05552 hypothetical protein 100180 100629 1
CDS RSp0092 NP_521653.1 RS05551 hypothetical protein 100629 100997 1
CDS TIS1421b NP_521654.1 RSp0093 TIS1421-transposase protein B 101434 101820 -1
CDS TIS1421a NP_521655.1 RSp0094 TIS1421-transposase protein A 101832 102236 -1
CDS RSp0095 NP_521656.1 RS06004 hypothetical protein 102296 102562 1
CDS RSp0096 NP_521657.1 RS05526 putative RHS-related protein 103294 105411 1
CDS RSp0097 NP_521658.1 RS05527 ankyrin repeat-containing protein 105418 105870 1
CDS RSp0098 NP_521659.1 RS05528 hypothetical protein 105962 106273 1
CDS RSp0099 NP_521660.1 RS03024 AWR protein 1 106270 109653 1
CDS RSp0100 NP_521661.1 RS03023 putative ferrisiderophore receptor protein 109684 111795 -1